Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:53 (34945): wrapper (7.7.26015): starting
19:12:53 (34945): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 19:12:53] Arguments: --nthreads 8
[2024-06-27 19:12:53] Threads: 8
[2024-06-27 19:12:53] Checking for CVMFS
[2024-06-27 19:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 19:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 19:12:53] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 19:12:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 19:12:54] 2.11.2.0 66359 2240 126788 134365 1 277 17584197 18432001 19577 130560 0 8712737 98.922 20138551 42126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 19:12:54] CVMFS is ok
[2024-06-27 19:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 19:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 19:12:54] Further information can be found at the LHC@home message board.
[2024-06-27 19:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 19:12:54] Checking for apptainer binary...
[2024-06-27 19:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 19:12:54] Running /usr/bin/apptainer --version
[2024-06-27 19:12:54] apptainer version 1.3.1-1.el7
[2024-06-27 19:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 19:12:56] c-212-19.aglt2.org
[2024-06-27 19:12:56] apptainer works
[2024-06-27 19:12:56] Set ATHENA_PROC_NUMBER=8
[2024-06-27 19:12:56] Set ATHENA_CORE_NUMBER=8
[2024-06-27 19:12:56] Starting ATLAS job with PandaID=6245076662
[2024-06-27 19:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 20:49:07]  *** The last 200 lines of the pilot log: ***
[2024-06-27 20:49:07] 2024-06-28 00:48:11,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:11,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 20:49:07] 2024-06-28 00:48:13,778 | INFO     | job 6245076662 has state=finished
[2024-06-27 20:49:07] 2024-06-28 00:48:13,778 | INFO     | preparing for final server update for job 6245076662 in state='finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:13,780 | INFO     | this job has now completed (state=finished)
[2024-06-27 20:49:07] 2024-06-28 00:48:13,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 20:49:07] 2024-06-28 00:48:13,780 | INFO     | job 6245076662 has finished - writing final server update
[2024-06-27 20:49:07] 2024-06-28 00:48:13,780 | INFO     | total number of processed events: 400 (read)
[2024-06-27 20:49:07] 2024-06-28 00:48:13,785 | INFO     | executing command: lscpu
[2024-06-27 20:49:07] 2024-06-28 00:48:13,812 | INFO     | monitor loop #435: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:13,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:13,945 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 20:49:07] 2024-06-28 00:48:13,945 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 20:49:07] 2024-06-28 00:48:14,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 20:49:07] 2024-06-28 00:48:16,318 | INFO     | monitor loop #436: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:16,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:18,842 | INFO     | monitor loop #437: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:18,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:21,354 | INFO     | monitor loop #438: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:21,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:23,878 | INFO     | monitor loop #439: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:23,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:26,391 | INFO     | monitor loop #440: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:26,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:28,900 | INFO     | monitor loop #441: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:28,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:31,405 | INFO     | monitor loop #442: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:31,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:33,912 | INFO     | monitor loop #443: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:33,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:36,423 | INFO     | monitor loop #444: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:36,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:38,931 | INFO     | monitor loop #445: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:38,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:41,442 | INFO     | monitor loop #446: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:41,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:43,948 | INFO     | monitor loop #447: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:43,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:46,454 | INFO     | monitor loop #448: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:46,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:48,962 | INFO     | monitor loop #449: job 0:6245076662 is in state 'finished'
[2024-06-27 20:49:07] 2024-06-28 00:48:48,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,632 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 20:49:07] 2024-06-28 00:48:50,632 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6245076662/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,633 | INFO     | extracted standard info from prmon json
[2024-06-27 20:49:07] 2024-06-28 00:48:50,633 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 20:49:07] 2024-06-28 00:48:50,634 | WARNING  | GPU info not found in prmon json
[2024-06-27 20:49:07] 2024-06-28 00:48:50,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 20:49:07] 2024-06-28 00:48:50,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 20:49:07] 2024-06-28 00:48:50,636 | INFO     | fitting pss+swap vs Time
[2024-06-27 20:49:07] 2024-06-28 00:48:50,636 | INFO     | model: linear, x: [1719530360.0, 1719530421.0, 1719530482.0, 1719530543.0, 1719530604.0, 1719530665.0, 1719530726.0, 1719530787.0, 1719530848.0, 1719530909.0, 1719
[2024-06-27 20:49:07] 2024-06-28 00:48:50,636 | INFO     | sum of square deviations: 197203697.5
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | sum of deviations: 18629812634.500004
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | mean x: 1719532952.5
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | mean y: 2496568.6860465114
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | -- intersect: -162441601234.92435
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | intersect: -162441601234.92435
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | chi2: 2.2661645575715252
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | -- intersect: -162441601234.92435
[2024-06-27 20:49:07] 2024-06-28 00:48:50,637 | INFO     | current memory leak: 94.47 B/s (using 86 data points, chi2=2.27)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | ..............................
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . Timing measurements:
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . get job = 0 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . initial setup = 2 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . payload setup = 12 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . stage-in = 0 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . payload execution = 5647 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . stage-out = 1 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | . log creation = 0 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,638 | INFO     | ..............................
[2024-06-27 20:49:07] 2024-06-28 00:48:50,711 | INFO     | 
[2024-06-27 20:49:07] 2024-06-28 00:48:50,711 | INFO     | job summary report
[2024-06-27 20:49:07] 2024-06-28 00:48:50,711 | INFO     | --------------------------------------------------
[2024-06-27 20:49:07] 2024-06-28 00:48:50,711 | INFO     | PanDA job id: 6245076662
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | task id: 40092522
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | errors: (none)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | pilot state: finished 
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | transexitcode: 0
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | exeerrorcode: 0
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | exeerrordiag: 
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | exitcode: 0
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | exitmsg: OK
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | cpuconsumptiontime: 31582 s
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | nevents: 400
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | neventsw: 0
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | pid: 75990
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | pgrp: 75990
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | corecount: 8
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | event service: False
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | sizes: {0: 2387064, 10: 2387270, 11: 2387298, 5664: 2413742, 5666: 2422702, 5667: 2422758, 5705: 2423056}
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | --------------------------------------------------
[2024-06-27 20:49:07] 2024-06-28 00:48:50,712 | INFO     | 
[2024-06-27 20:49:07] 2024-06-28 00:48:50,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-27 20:49:07] 2024-06-28 00:48:50,939 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | job 6245076662 has completed (purged errors)
[2024-06-27 20:49:07] 2024-06-28 00:48:50,941 | INFO     | overall cleanup function is called
[2024-06-27 20:49:07] 2024-06-28 00:48:51,954 | INFO     | --- collectZombieJob: --- 10, [75990]
[2024-06-27 20:49:07] 2024-06-28 00:48:51,955 | INFO     | zombie collector waiting for pid 75990
[2024-06-27 20:49:07] 2024-06-28 00:48:51,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 20:49:07] 2024-06-28 00:48:52,960 | INFO     | collected zombie processes
[2024-06-27 20:49:07] 2024-06-28 00:48:52,960 | INFO     | will now attempt to kill all subprocesses of pid=75990
[2024-06-27 20:49:07] 2024-06-28 00:48:53,540 | INFO     | process IDs to be killed: [75990] (in reverse order)
[2024-06-27 20:49:07] 2024-06-28 00:48:53,734 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 20:49:07] 2024-06-28 00:48:53,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 20:49:07] 2024-06-28 00:48:53,744 | INFO     | did not find any defunct processes belonging to 75990
[2024-06-27 20:49:07] 2024-06-28 00:48:53,754 | INFO     | did not find any defunct processes belonging to 75990
[2024-06-27 20:49:07] 2024-06-28 00:48:53,755 | INFO     | ready for new job
[2024-06-27 20:49:07] 2024-06-28 00:48:53,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 20:49:07] 2024-06-28 00:48:53,756 | INFO     | *************************************
[2024-06-27 20:49:07] 2024-06-28 00:48:53,756 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 20:49:07] 2024-06-28 00:48:53,756 | INFO     | *************************************
[2024-06-27 20:49:07] 2024-06-28 00:48:53,756 | INFO     | 
[2024-06-27 20:49:07] 2024-06-28 00:48:53,760 | INFO     | architecture information:
[2024-06-27 20:49:07] 2024-06-28 00:48:53,761 | INFO     | executing command: cat /etc/os-release
[2024-06-27 20:49:07] 2024-06-28 00:48:53,923 | INFO     | cat /etc/os-release:
[2024-06-27 20:49:07] NAME="CentOS Linux"
[2024-06-27 20:49:07] VERSION="7 (Core)"
[2024-06-27 20:49:07] ID="centos"
[2024-06-27 20:49:07] ID_LIKE="rhel fedora"
[2024-06-27 20:49:07] VERSION_ID="7"
[2024-06-27 20:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 20:49:07] ANSI_COLOR="0;31"
[2024-06-27 20:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 20:49:07] HOME_URL="https://www.centos.org/"
[2024-06-27 20:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 20:49:07] 
[2024-06-27 20:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 20:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 20:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 20:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 20:49:07] 
[2024-06-27 20:49:07] 2024-06-28 00:48:53,923 | INFO     | *************************************
[2024-06-27 20:49:07] 2024-06-28 00:48:54,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-27 20:49:07] 2024-06-28 00:48:54,559 | INFO     | sufficient remaining disk space (105411248128 B)
[2024-06-27 20:49:07] 2024-06-28 00:48:54,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 20:49:07] 2024-06-28 00:48:54,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 20:49:07] 2024-06-28 00:48:54,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 20:49:07] 2024-06-28 00:48:54,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 20:49:07] 2024-06-28 00:48:54,853 | INFO     | all payload control threads have been joined
[2024-06-27 20:49:07] 2024-06-28 00:48:54,908 | INFO     | all job control threads have been joined
[2024-06-27 20:49:07] 2024-06-28 00:48:54,963 | INFO     | all data control threads have been joined
[2024-06-27 20:49:07] 2024-06-28 00:48:55,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 20:49:07] 2024-06-28 00:48:55,019 | INFO     | aborting loop
[2024-06-27 20:49:07] 2024-06-28 00:48:55,128 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 20:49:07] 2024-06-28 00:48:55,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 20:49:07] 2024-06-28 00:48:55,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 20:49:07] 2024-06-28 00:48:55,564 | INFO     | [job] retrieve thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,588 | INFO     | [data] copytool_in thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,674 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,704 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 20:49:07] 2024-06-28 00:48:55,859 | INFO     | [payload] control thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,908 | INFO     | [payload] failed_post thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,918 | INFO     | [job] control thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:55,969 | INFO     | [data] control thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,022 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,028 | INFO     | [job] job monitor thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,568 | INFO     | [data] copytool_out thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,734 | INFO     | [job] queue monitor thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,918 | INFO     | [job] validate thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:56,922 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:57,024 | INFO     | [payload] validate_post thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:48:58,578 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 20:49:07] 2024-06-28 00:49:00,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193283270464)>', '<ExcThread(monitor, started 140192472090368)>']
[2024-06-27 20:49:07] 2024-06-28 00:49:01,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 20:49:07] 2024-06-28 00:49:01,168 | INFO     | [monitor] control thread has ended
[2024-06-27 20:49:07] 2024-06-28 00:49:05,484 | INFO     | all workflow threads have been joined
[2024-06-27 20:49:07] 2024-06-28 00:49:05,484 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 20:49:07] 2024-06-28 00:49:05,485 | INFO     | traces error code: 0
[2024-06-27 20:49:07] 2024-06-28 00:49:05,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 20:49:07] 2024-06-28 00:49:05,710 [wrapper] ==== pilot stdout END ====
[2024-06-27 20:49:07] 2024-06-28 00:49:05,742 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 20:49:07] 2024-06-28 00:49:05,750 [wrapper] pilotpid: 48616
[2024-06-27 20:49:07] 2024-06-28 00:49:05,788 [wrapper] Pilot exit status: 0
[2024-06-27 20:49:07] 2024-06-28 00:49:05,974 [wrapper] pandaids: 6245076662
[2024-06-27 20:49:07] 2024-06-28 00:49:06,259 [wrapper] cleanup supervisor_pilot 55694 48617
[2024-06-27 20:49:07] 2024-06-28 00:49:06,302 [wrapper] Test setup, not cleaning
[2024-06-27 20:49:07] 2024-06-28 00:49:06,338 [wrapper] ==== wrapper stdout END ====
[2024-06-27 20:49:07] 2024-06-28 00:49:06,362 [wrapper] ==== wrapper stderr END ====
[2024-06-27 20:49:07] 2024-06-28 00:49:06,454 [wrapper] apfmon messages muted
[2024-06-27 20:49:07]  *** Error codes and diagnostics ***
[2024-06-27 20:49:07]     "exeErrorCode": 0,
[2024-06-27 20:49:07]     "exeErrorDiag": "",
[2024-06-27 20:49:07]     "pilotErrorCode": 0,
[2024-06-27 20:49:07]     "pilotErrorDiag": "",
[2024-06-27 20:49:07]  *** Listing of results directory ***
[2024-06-27 20:49:07] total 680000
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 09:44 pilot3.tar.gz
[2024-06-27 20:49:07] -rwx------ 1 boincer umatlas     32220 Jun 26 10:02 runpilot2-wrapper.sh
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 10:02 queuedata.json
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas       100 Jun 27 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 20:49:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 19:12 run_atlas
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas       105 Jun 27 19:12 job.xml
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas 502146058 Jun 27 19:12 EVNT.40092520._000001.pool.root.1
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 19:12 start_atlas.sh
[2024-06-27 20:49:07] drwxrwx--x 2 boincer umatlas      4096 Jun 27 19:12 shared
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas    482484 Jun 27 19:12 input.tar.gz
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas         0 Jun 27 19:12 boinc_lockfile
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas      2632 Jun 27 19:12 pandaJob.out
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas       424 Jun 27 19:12 setup.sh.local
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas   1036930 Jun 27 19:13 agis_schedconf.cvmfs.json
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas         0 Jun 27 19:13 agis_ddmendpoints.agis.ALL.json
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas   1321378 Jun 27 19:13 cric_ddmendpoints.json
[2024-06-27 20:49:07] drwx------ 4 boincer umatlas      4096 Jun 27 19:13 pilot3
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas      6302 Jun 27 20:46 init_data.xml
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas 188983243 Jun 27 20:47 HITS.40092522._000001.pool.root.1
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas       530 Jun 27 20:47 boinc_task_state.xml
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas      1087 Jun 27 20:48 memory_monitor_summary.json
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas    300882 Jun 27 20:48 log.40092522._000001.job.log.tgz.1
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas        95 Jun 27 20:48 pilot_heartbeat.json
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas      7738 Jun 27 20:48 heartbeat.json
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas      4212 Jun 27 20:49 pilotlog.txt
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas    523725 Jun 27 20:49 log.40092522._000001.job.log.1
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 20:49 boinc_mmap_file
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas        27 Jun 27 20:49 wrapper_checkpoint.txt
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas       357 Jun 27 20:49 output.list
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas       620 Jun 27 20:49 runtime_log
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas    839680 Jun 27 20:49 result.tar.gz
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas       647 Jun 27 20:49 v0kNDmSPig5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmSYoKDmD4Bptn.diag
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas     10999 Jun 27 20:49 runtime_log.err
[2024-06-27 20:49:07] -rw-r--r-- 1 boincer umatlas     22396 Jun 27 20:49 stderr.txt
[2024-06-27 20:49:07] HITS file was successfully produced:
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas 188983243 Jun 27 20:47 shared/HITS.pool.root.1
[2024-06-27 20:49:07]  *** Contents of shared directory: ***
[2024-06-27 20:49:07] total 676252
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas 502146058 Jun 27 19:12 ATLAS.root_0
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 19:12 start_atlas.sh
[2024-06-27 20:49:07] -rw-r--r-- 2 boincer umatlas    482484 Jun 27 19:12 input.tar.gz
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas 188983243 Jun 27 20:47 HITS.pool.root.1
[2024-06-27 20:49:07] -rw------- 1 boincer umatlas    839680 Jun 27 20:49 result.tar.gz
20:49:08 (34945): run_atlas exited; CPU time 31204.200580
20:49:08 (34945): called boinc_finish(0)

</stderr_txt>
]]>

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