Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-29 00:32:52 (15156): Detected: vboxwrapper 26206
2024-06-29 00:32:52 (15156): Detected: BOINC client v7.16.5
2024-06-29 00:32:52 (15156): Detected: VirtualBox VboxManage Interface (Version: 5.1.22)
2024-06-29 00:32:53 (15156): Successfully copied 'init_data.xml' to the shared directory.
2024-06-29 00:32:53 (15156): Create VM. (boinc_0b812d7662e66368, slot#0)
2024-06-29 00:32:54 (15156): Setting Memory Size for VM. (4400MB)
2024-06-29 00:32:54 (15156): Setting CPU Count for VM. (4)
2024-06-29 00:32:54 (15156): Setting Chipset Options for VM.
2024-06-29 00:32:54 (15156): Setting Graphics Controller Options for VM.
2024-06-29 00:32:55 (15156): Setting Boot Options for VM.
2024-06-29 00:32:55 (15156): Setting Network Configuration for NAT.
2024-06-29 00:32:55 (15156): Enabling VM Network Access.
2024-06-29 00:32:55 (15156): Disabling USB Support for VM.
2024-06-29 00:32:56 (15156): Disabling COM Port Support for VM.
2024-06-29 00:32:56 (15156): Disabling LPT Port Support for VM.
2024-06-29 00:32:56 (15156): Disabling Audio Support for VM.
2024-06-29 00:32:56 (15156): Disabling Clipboard Support for VM.
2024-06-29 00:32:57 (15156): Disabling Drag and Drop Support for VM.
2024-06-29 00:32:57 (15156): Adding storage controller(s) to VM.
2024-06-29 00:32:57 (15156): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-29 00:32:58 (15156): Adding VirtualBox Guest Additions to VM.
2024-06-29 00:32:58 (15156): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-29 00:32:58 (15156): forwarding host port 49646 to guest port 80
2024-06-29 00:32:59 (15156): Enabling remote desktop for VM.
2024-06-29 00:32:59 (15156): Enabling shared directory for VM.
2024-06-29 00:33:00 (15156): Starting VM using VBoxManage interface. (boinc_0b812d7662e66368, slot#0)
2024-06-29 00:33:03 (15156): Successfully started VM. (PID = '5212')
2024-06-29 00:33:03 (15156): Reporting VM Process ID to BOINC.
2024-06-29 00:33:03 (15156): Guest Log: BIOS: VirtualBox 5.1.22
2024-06-29 00:33:03 (15156): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-29 00:33:03 (15156): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-29 00:33:03 (15156): Detected: Web Application Enabled (http://localhost:49646)
2024-06-29 00:33:03 (15156): Detected: Remote Desktop Enabled (localhost:49647)
2024-06-29 00:33:03 (15156): Preference change detected
2024-06-29 00:33:03 (15156): Setting CPU throttle for VM. (100%)
2024-06-29 00:33:04 (15156): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-29 00:33:05 (15156): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-29 00:33:05 (15156): Guest Log: BIOS: Booting from Hard Disk...
2024-06-29 00:33:08 (15156): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-29 00:33:08 (15156): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-29 00:33:08 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-29 00:33:16 (15156): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-29 00:33:16 (15156): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-29 00:34:05 (15156): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000183 main     Log opened 2024-06-29T00:34:02.724919000Z
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000276 main     OS Product: Linux
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000308 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000335 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000362 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000363 main     Process ID: 1325
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.000363 main     Package type: LINUX_64BITS_GENERIC
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.001099 main     5.2.32 r132073 started. Verbose level = 0
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.001816 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.001954 main     Session 0 is about to close ...
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.001985 main     Stopping all guest processes ...
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.002012 main     Closing all guest files ...
2024-06-29 00:34:05 (15156): Guest Log: 00:00:00.002079 main     Ended.
2024-06-29 00:34:05 (15156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-29 00:34:05 (15156): Guest Log: [INFO] Mounting shared directory
2024-06-29 00:34:05 (15156): Guest Log: [INFO] Checking for init_data.xml
2024-06-29 00:34:10 (15156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-29 00:34:10 (15156): Guest Log: [INFO] Detected branch: prod
2024-06-29 00:34:11 (15156): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-29 00:34:11 (15156): Guest Log: Copying input files
2024-06-29 00:34:22 (15156): Guest Log: Copied input files into RunAtlas.
2024-06-29 00:34:22 (15156): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-29 00:34:22 (15156): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-29 00:34:22 (15156): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-29 00:34:22 (15156): Guest Log: Further information can be found at the LHC@home message board.
2024-06-29 00:35:20 (15156): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-29 00:35:21 (15156): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-29 00:35:21 (15156): Guest Log: 2.6.3.0 1593 1 30180 134405 4 1 3117207 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-29 00:35:24 (15156): Guest Log: copied the webapp to /var/www
2024-06-29 00:35:24 (15156): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-29 00:35:24 (15156): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-29 00:35:25 (15156): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-29 00:35:25 (15156): Guest Log:  *** Starting ATLAS job. (PandaID=6245028424 taskID=38921001) ***
2024-06-29 02:13:04 (15156): Status Report: Elapsed Time: '6000.000000'
2024-06-29 02:13:04 (15156): Status Report: CPU Time: '19532.245606'
2024-06-29 03:53:05 (15156): Status Report: Elapsed Time: '12000.000000'
2024-06-29 03:53:05 (15156): Status Report: CPU Time: '43521.080979'
2024-06-29 05:33:05 (15156): Status Report: Elapsed Time: '18000.000000'
2024-06-29 05:33:05 (15156): Status Report: CPU Time: '67506.889934'
2024-06-29 07:13:06 (15156): Status Report: Elapsed Time: '24000.000000'
2024-06-29 07:13:06 (15156): Status Report: CPU Time: '91493.385292'
2024-06-29 08:53:06 (15156): Status Report: Elapsed Time: '30000.000000'
2024-06-29 08:53:06 (15156): Status Report: CPU Time: '115479.397048'
2024-06-29 10:33:07 (15156): Status Report: Elapsed Time: '36000.000000'
2024-06-29 10:33:07 (15156): Status Report: CPU Time: '139465.908006'
2024-06-29 12:13:07 (15156): Status Report: Elapsed Time: '42000.000000'
2024-06-29 12:13:07 (15156): Status Report: CPU Time: '163441.077692'
2024-06-29 12:53:10 (15156): Guest Log:  *** Job finished ***
2024-06-29 12:53:10 (15156): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:52:58,494 | INFO     | [job] queue monitor thread has finished
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:52:58,496 | INFO     | [data] copytool_out thread has finished
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:00,547 | INFO     | [data] queue_monitor thread has finished
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:00,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417828972352)>', '<ExcThread(monitor, started 140417169352448)>']
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:01,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:01,201 | INFO     | [monitor] control thread has ended
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,798 | INFO     | all workflow threads have been joined
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,798 | INFO     | end of generic workflow (traces error code: 0)
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,798 | INFO     | traces error code: 0
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,908 [wrapper] ==== pilot stdout END ====
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,914 [wrapper] ==== wrapper stdout RESUME ====
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,919 [wrapper] pilotpid: 5953
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:05,925 [wrapper] Pilot exit status: 0
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,068 [wrapper] pandaids: 6245028424
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,108 [wrapper] cleanup supervisor_pilot 10517 5954
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,117 [wrapper] Test setup, not cleaning
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,122 [wrapper] ==== wrapper stdout END ====
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,126 [wrapper] ==== wrapper stderr END ====
2024-06-29 12:53:10 (15156): Guest Log: 2024-06-29 12:53:06,137 [wrapper] apfmon messages muted
2024-06-29 12:53:10 (15156): Guest Log:  *** Error codes and diagnostics ***
2024-06-29 12:53:10 (15156): Guest Log:     "exeErrorCode": 0,
2024-06-29 12:53:10 (15156): Guest Log:     "exeErrorDiag": "",
2024-06-29 12:53:10 (15156): Guest Log:     "pilotErrorCode": 0,
2024-06-29 12:53:10 (15156): Guest Log:     "pilotErrorDiag": "",
2024-06-29 12:53:10 (15156): Guest Log:  *** Listing of results directory ***
2024-06-29 12:53:10 (15156): Guest Log: total 356340
2024-06-29 12:53:10 (15156): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 26 12:33 pilot3.tar.gz
2024-06-29 12:53:10 (15156): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 26 13:09 queuedata.json
2024-06-29 12:53:10 (15156): Guest Log: -rwx------. 1 atlas atlas     32220 Jun 26 13:10 runpilot2-wrapper.sh
2024-06-29 12:53:10 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas     10730 Jun 29 00:34 init_data.xml
2024-06-29 12:53:10 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas    482530 Jun 29 00:34 input.tar.gz
2024-06-29 12:53:10 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 29 00:34 start_atlas.sh
2024-06-29 12:53:10 (15156): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 29 00:34 EVNT.38776190._000903.pool.root.1 -> /data/./ATLAS.root_0
2024-06-29 12:53:10 (15156): Guest Log: -rw-r--r--. 1 atlas atlas      2655 Jun 29 00:35 pandaJob.out
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas       424 Jun 29 00:35 setup.sh.local
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas   1036528 Jun 29 00:36 agis_schedconf.cvmfs.json
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas   1321378 Jun 29 00:36 cric_ddmendpoints.json
2024-06-29 12:53:10 (15156): Guest Log: drwx------. 4 atlas atlas      4096 Jun 29 00:36 pilot3
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas 351331705 Jun 29 12:51 HITS.38921001._065578.pool.root.1
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas      1028 Jun 29 12:52 memory_monitor_summary.json
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas         0 Jun 29 12:52 agis_ddmendpoints.agis.ALL.json
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas    622986 Jun 29 12:52 log.38921001._065578.job.log.tgz.1
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas        95 Jun 29 12:52 pilot_heartbeat.json
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas      7733 Jun 29 12:52 heartbeat.json
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas      4580 Jun 29 12:53 pilotlog.txt
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas   4413648 Jun 29 12:53 log.38921001._065578.job.log.1
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas       357 Jun 29 12:53 output.list
2024-06-29 12:53:10 (15156): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 29 12:53 runtime_log
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas   5058560 Jun 29 12:53 result.tar.gz
2024-06-29 12:53:10 (15156): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Jun 29 12:53 runtime_log.err
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas       652 Jun 29 12:53 i78KDmHbhg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmFYoKDmYTIJvn.diag
2024-06-29 12:53:10 (15156): Guest Log: Looking for outputfile HITS.38921001._065578.pool.root.1
2024-06-29 12:53:10 (15156): Guest Log: HITS file was successfully produced
2024-06-29 12:53:10 (15156): Guest Log: -rw-------. 1 atlas atlas 351331705 Jun 29 12:51 /home/atlas/RunAtlas/HITS.38921001._065578.pool.root.1
2024-06-29 12:53:12 (15156): Guest Log: Successfully finished the ATLAS job!
2024-06-29 12:53:12 (15156): Guest Log: Copying the results back to the shared directory!
2024-06-29 12:53:12 (15156): Guest Log:  *** Contents of shared directory: ***
2024-06-29 12:53:12 (15156): Guest Log: total 948953
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root 614825147 Jun 28 21:32 ATLAS.root_0
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root 351331705 Jun 29 09:53 HITS.pool.root.1
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root     10730 Jun 28 21:32 init_data.xml
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root    482530 Jun 26 13:11 input.tar.gz
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root   5058560 Jun 29 09:53 result.tar.gz
2024-06-29 12:53:12 (15156): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 26 13:11 start_atlas.sh
2024-06-29 12:53:12 (15156): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-29 12:53:12 (15156): VM Completion File Detected.
2024-06-29 12:53:12 (15156): Powering off VM.
2024-06-29 12:53:12 (15156): Successfully stopped VM.
2024-06-29 12:53:12 (15156): Deregistering VM. (boinc_0b812d7662e66368, slot#0)
2024-06-29 12:53:12 (15156): Removing network bandwidth throttle group from VM.
2024-06-29 12:53:13 (15156): Removing VM from VirtualBox.
12:53:18 (15156): called boinc_finish(0)

</stderr_txt>
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