Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:04:49 (73343): wrapper (7.7.26015): starting
03:04:49 (73343): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 03:04:49] Arguments: --nthreads 8
[2024-06-26 03:04:49] Threads: 8
[2024-06-26 03:04:49] Checking for CVMFS
[2024-06-26 03:04:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 03:04:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 03:04:49] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 03:04:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 03:04:50] 2.11.2.0 5300 15051 132596 134305 1 349 16223082 18432000 23966 130560 0 3412566 98.382 10965905 70024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 03:04:50] CVMFS is ok
[2024-06-26 03:04:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 03:04:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 03:04:50] Further information can be found at the LHC@home message board.
[2024-06-26 03:04:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 03:04:50] Checking for apptainer binary...
[2024-06-26 03:04:50] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 03:04:50] Running /usr/bin/apptainer --version
[2024-06-26 03:04:50] apptainer version 1.3.2-1.el7
[2024-06-26 03:04:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 03:04:51] c-212-10.aglt2.org
[2024-06-26 03:04:51] apptainer works
[2024-06-26 03:04:51] Set ATHENA_PROC_NUMBER=8
[2024-06-26 03:04:51] Set ATHENA_CORE_NUMBER=8
[2024-06-26 03:04:52] Starting ATLAS job with PandaID=6244642370
[2024-06-26 03:04:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 09:40:53]  *** The last 200 lines of the pilot log: ***
[2024-06-26 09:40:54] 2024-06-26 13:40:14,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:16,587 | INFO     | monitor loop #1707: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:16,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:19,092 | INFO     | monitor loop #1708: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:19,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:21,597 | INFO     | monitor loop #1709: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:21,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:24,103 | INFO     | monitor loop #1710: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:24,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:26,608 | INFO     | monitor loop #1711: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:26,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,113 | INFO     | monitor loop #1712: job 0:6244642370 is in state 'finished'
[2024-06-26 09:40:54] 2024-06-26 13:40:29,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,867 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 09:40:54] 2024-06-26 13:40:29,868 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6244642370/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,868 | INFO     | extracted standard info from prmon json
[2024-06-26 09:40:54] 2024-06-26 13:40:29,869 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 09:40:54] 2024-06-26 13:40:29,869 | WARNING  | GPU info not found in prmon json
[2024-06-26 09:40:54] 2024-06-26 13:40:29,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 09:40:54] 2024-06-26 13:40:29,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 09:40:54] 2024-06-26 13:40:29,875 | INFO     | fitting pss+swap vs Time
[2024-06-26 09:40:54] 2024-06-26 13:40:29,876 | INFO     | model: linear, x: [1719385568.0, 1719385629.0, 1719385690.0, 1719385751.0, 1719385812.0, 1719385873.0, 1719385934.0, 1719385995.0, 1719386056.0, 1719386117.0, 1719
[2024-06-26 09:40:54] 2024-06-26 13:40:29,878 | INFO     | sum of square deviations: 18112205828.98949
[2024-06-26 09:40:54] 2024-06-26 13:40:29,880 | INFO     | sum of deviations: 746047218845.978
[2024-06-26 09:40:54] 2024-06-26 13:40:29,881 | INFO     | mean x: 1719397371.5051546
[2024-06-26 09:40:54] 2024-06-26 13:40:29,881 | INFO     | mean y: 2381420.0103092785
[2024-06-26 09:40:54] 2024-06-26 13:40:29,881 | INFO     | -- intersect: -70820114702.98523
[2024-06-26 09:40:54] 2024-06-26 13:40:29,881 | INFO     | intersect: -70820114702.98523
[2024-06-26 09:40:54] 2024-06-26 13:40:29,881 | INFO     | chi2: 16.996277254433686
[2024-06-26 09:40:54] 2024-06-26 13:40:29,882 | INFO     | model: linear, x: [1719385568.0, 1719385629.0, 1719385690.0, 1719385751.0, 1719385812.0, 1719385873.0, 1719385934.0, 1719385995.0, 1719386056.0, 1719386117.0, 1719
[2024-06-26 09:40:54] 2024-06-26 13:40:29,882 | INFO     | sum of square deviations: 17420974873.989574
[2024-06-26 09:40:54] 2024-06-26 13:40:29,884 | INFO     | sum of deviations: 761113719317.7961
[2024-06-26 09:40:54] 2024-06-26 13:40:29,884 | INFO     | mean x: 1719397219.0052218
[2024-06-26 09:40:54] 2024-06-26 13:40:29,884 | INFO     | mean y: 2384683.1018276764
[2024-06-26 09:40:54] 2024-06-26 13:40:29,884 | INFO     | -- intersect: -75117223823.74658
[2024-06-26 09:40:54] 2024-06-26 13:40:29,884 | INFO     | intersect: -75117223823.74658
[2024-06-26 09:40:54] 2024-06-26 13:40:29,885 | INFO     | chi2: 16.199783271315198
[2024-06-26 09:40:54] 2024-06-26 13:40:29,885 | INFO     | current chi2=16.199783271315198 (change=4.686284950492395 %)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,885 | INFO     | right removable region: 382
[2024-06-26 09:40:54] 2024-06-26 13:40:29,885 | INFO     | model: linear, x: [1719385873.0, 1719385934.0, 1719385995.0, 1719386056.0, 1719386117.0, 1719386178.0, 1719386239.0, 1719386300.0, 1719386361.0, 1719386422.0, 1719
[2024-06-26 09:40:54] 2024-06-26 13:40:29,885 | INFO     | sum of square deviations: 17420973653.98958
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | sum of deviations: 632409757640.6804
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | mean x: 1719397524.0052218
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | mean y: 2406463.1592689296
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | -- intersect: -62414528034.362976
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | intersect: -62414528034.362976
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | chi2: 13.401614848389853
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | current chi2=13.401614848389853 (change=21.14970444546097 %)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,888 | INFO     | left removable region: 10
[2024-06-26 09:40:54] 2024-06-26 13:40:29,889 | INFO     | model: linear, x: [1719386178.0, 1719386239.0, 1719386300.0, 1719386361.0, 1719386422.0, 1719386483.0, 1719386544.0, 1719386605.0, 1719386666.0, 1719386727.0, 1719
[2024-06-26 09:40:54] 2024-06-26 13:40:29,889 | INFO     | sum of square deviations: 15962643176.989262
[2024-06-26 09:40:54] 2024-06-26 13:40:29,891 | INFO     | sum of deviations: 557826224466.4197
[2024-06-26 09:40:54] 2024-06-26 13:40:29,891 | INFO     | mean x: 1719397493.5053763
[2024-06-26 09:40:54] 2024-06-26 13:40:29,891 | INFO     | mean y: 2430427.290322581
[2024-06-26 09:40:54] 2024-06-26 13:40:29,891 | INFO     | -- intersect: -60083170780.769226
[2024-06-26 09:40:54] 2024-06-26 13:40:29,891 | INFO     | intersect: -60083170780.769226
[2024-06-26 09:40:54] 2024-06-26 13:40:29,892 | INFO     | chi2: 10.61091539041158
[2024-06-26 09:40:54] 2024-06-26 13:40:29,892 | INFO     | -- intersect: -60083170780.769226
[2024-06-26 09:40:54] 2024-06-26 13:40:29,892 | INFO     | current memory leak: 34.95 B/s (using 372 data points, chi2=10.61)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,892 | INFO     | ..............................
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . Timing measurements:
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . get job = 0 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . initial setup = 2 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . payload setup = 13 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . stage-in = 0 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . payload execution = 23630 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . stage-out = 3 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | . log creation = 0 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,893 | INFO     | ..............................
[2024-06-26 09:40:54] 2024-06-26 13:40:29,965 | INFO     | 
[2024-06-26 09:40:54] 2024-06-26 13:40:29,965 | INFO     | job summary report
[2024-06-26 09:40:54] 2024-06-26 13:40:29,965 | INFO     | --------------------------------------------------
[2024-06-26 09:40:54] 2024-06-26 13:40:29,965 | INFO     | PanDA job id: 6244642370
[2024-06-26 09:40:54] 2024-06-26 13:40:29,965 | INFO     | task id: 38920995
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | errors: (none)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | pilot state: finished 
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | transexitcode: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | exeerrorcode: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | exeerrordiag: 
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | exitcode: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | exitmsg: OK
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | cpuconsumptiontime: 98823 s
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | nevents: 400
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | neventsw: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | pid: 89984
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | pgrp: 89984
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | corecount: 8
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | event service: False
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | sizes: {0: 2387021, 10: 2387227, 11: 2387255, 23646: 2421509, 23650: 2430469, 23653: 2430525, 23690: 2430823}
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | --------------------------------------------------
[2024-06-26 09:40:54] 2024-06-26 13:40:29,966 | INFO     | 
[2024-06-26 09:40:54] 2024-06-26 13:40:29,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | job 6244642370 has completed (purged errors)
[2024-06-26 09:40:54] 2024-06-26 13:40:29,986 | INFO     | overall cleanup function is called
[2024-06-26 09:40:54] 2024-06-26 13:40:30,994 | INFO     | --- collectZombieJob: --- 10, [89984]
[2024-06-26 09:40:54] 2024-06-26 13:40:30,994 | INFO     | zombie collector waiting for pid 89984
[2024-06-26 09:40:54] 2024-06-26 13:40:30,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 09:40:54] 2024-06-26 13:40:32,000 | INFO     | collected zombie processes
[2024-06-26 09:40:54] 2024-06-26 13:40:32,000 | INFO     | will now attempt to kill all subprocesses of pid=89984
[2024-06-26 09:40:54] 2024-06-26 13:40:32,549 | INFO     | process IDs to be killed: [89984] (in reverse order)
[2024-06-26 09:40:54] 2024-06-26 13:40:32,667 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 09:40:54] 2024-06-26 13:40:32,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 09:40:54] 2024-06-26 13:40:32,679 | INFO     | did not find any defunct processes belonging to 89984
[2024-06-26 09:40:54] 2024-06-26 13:40:32,687 | INFO     | did not find any defunct processes belonging to 89984
[2024-06-26 09:40:54] 2024-06-26 13:40:32,688 | INFO     | ready for new job
[2024-06-26 09:40:54] 2024-06-26 13:40:32,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 09:40:54] 2024-06-26 13:40:32,689 | INFO     | *************************************
[2024-06-26 09:40:54] 2024-06-26 13:40:32,689 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 09:40:54] 2024-06-26 13:40:32,689 | INFO     | *************************************
[2024-06-26 09:40:54] 2024-06-26 13:40:32,689 | INFO     | 
[2024-06-26 09:40:54] 2024-06-26 13:40:32,694 | INFO     | architecture information:
[2024-06-26 09:40:54] 2024-06-26 13:40:32,694 | INFO     | executing command: cat /etc/os-release
[2024-06-26 09:40:54] 2024-06-26 13:40:32,754 | INFO     | cat /etc/os-release:
[2024-06-26 09:40:54] NAME="CentOS Linux"
[2024-06-26 09:40:54] VERSION="7 (Core)"
[2024-06-26 09:40:54] ID="centos"
[2024-06-26 09:40:54] ID_LIKE="rhel fedora"
[2024-06-26 09:40:54] VERSION_ID="7"
[2024-06-26 09:40:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 09:40:54] ANSI_COLOR="0;31"
[2024-06-26 09:40:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 09:40:54] HOME_URL="https://www.centos.org/"
[2024-06-26 09:40:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 09:40:54] 
[2024-06-26 09:40:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 09:40:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 09:40:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 09:40:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 09:40:54] 
[2024-06-26 09:40:54] 2024-06-26 13:40:32,755 | INFO     | *************************************
[2024-06-26 09:40:54] 2024-06-26 13:40:33,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-26 09:40:54] 2024-06-26 13:40:33,378 | INFO     | sufficient remaining disk space (104420343808 B)
[2024-06-26 09:40:54] 2024-06-26 13:40:33,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 09:40:54] 2024-06-26 13:40:33,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 09:40:54] 2024-06-26 13:40:33,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 09:40:54] 2024-06-26 13:40:33,379 | INFO     | aborting loop
[2024-06-26 09:40:54] 2024-06-26 13:40:33,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 09:40:54] 2024-06-26 13:40:33,507 | INFO     | all payload control threads have been joined
[2024-06-26 09:40:54] 2024-06-26 13:40:33,775 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 09:40:54] 2024-06-26 13:40:33,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 09:40:54] 2024-06-26 13:40:33,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 09:40:54] 2024-06-26 13:40:34,137 | INFO     | all job control threads have been joined
[2024-06-26 09:40:54] 2024-06-26 13:40:34,247 | INFO     | all data control threads have been joined
[2024-06-26 09:40:54] 2024-06-26 13:40:34,385 | INFO     | [job] retrieve thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,389 | INFO     | [job] job monitor thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,429 | INFO     | [job] validate thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,513 | INFO     | [payload] control thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 09:40:54] 2024-06-26 13:40:34,720 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,727 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,782 | INFO     | [data] copytool_in thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,915 | INFO     | [payload] failed_post thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:34,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 09:40:54] 2024-06-26 13:40:35,142 | INFO     | [job] control thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:35,221 | INFO     | [payload] validate_post thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:35,253 | INFO     | [data] control thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:35,386 | INFO     | [data] copytool_out thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:35,834 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:35,986 | INFO     | [job] queue monitor thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:38,653 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:43,801 | INFO     | job.realtimelogging is not enabled
[2024-06-26 09:40:54] 2024-06-26 13:40:44,807 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 09:40:54] 2024-06-26 13:40:46,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342132184896)>', '<ExcThread(monitor, started 140341831243520)>']
[2024-06-26 09:40:54] 2024-06-26 13:40:46,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 09:40:54] 2024-06-26 13:40:46,853 | INFO     | [monitor] control thread has ended
[2024-06-26 09:40:54] 2024-06-26 13:40:51,793 | INFO     | all workflow threads have been joined
[2024-06-26 09:40:54] 2024-06-26 13:40:51,793 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 09:40:54] 2024-06-26 13:40:51,794 | INFO     | traces error code: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:51,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 09:40:54] 2024-06-26 13:40:51,992 [wrapper] ==== pilot stdout END ====
[2024-06-26 09:40:54] 2024-06-26 13:40:52,033 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 09:40:54] 2024-06-26 13:40:52,105 [wrapper] pilotpid: 80100
[2024-06-26 09:40:54] 2024-06-26 13:40:52,143 [wrapper] Pilot exit status: 0
[2024-06-26 09:40:54] 2024-06-26 13:40:52,173 [wrapper] pandaids: 6244642370
[2024-06-26 09:40:54] 2024-06-26 13:40:52,456 [wrapper] cleanup supervisor_pilot 95512 80101
[2024-06-26 09:40:54] 2024-06-26 13:40:52,459 [wrapper] Test setup, not cleaning
[2024-06-26 09:40:54] 2024-06-26 13:40:52,461 [wrapper] ==== wrapper stdout END ====
[2024-06-26 09:40:54] 2024-06-26 13:40:52,463 [wrapper] ==== wrapper stderr END ====
[2024-06-26 09:40:54] 2024-06-26 13:40:52,510 [wrapper] apfmon messages muted
[2024-06-26 09:40:54]  *** Error codes and diagnostics ***
[2024-06-26 09:40:54]     "exeErrorCode": 0,
[2024-06-26 09:40:54]     "exeErrorDiag": "",
[2024-06-26 09:40:54]     "pilotErrorCode": 0,
[2024-06-26 09:40:54]     "pilotErrorDiag": "",
[2024-06-26 09:40:54]  *** Listing of results directory ***
[2024-06-26 09:40:54] total 968156
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 02:46 pilot3.tar.gz
[2024-06-26 09:40:54] -rwx------ 1 boincer umatlas     32220 Jun 26 03:03 runpilot2-wrapper.sh
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 03:03 queuedata.json
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas       100 Jun 26 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 09:40:54] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 03:04 run_atlas
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas       105 Jun 26 03:04 job.xml
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas 633140116 Jun 26 03:04 EVNT.38776180._000472.pool.root.1
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 03:04 start_atlas.sh
[2024-06-26 09:40:54] drwxrwx--x 2 boincer umatlas      4096 Jun 26 03:04 shared
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas    482517 Jun 26 03:04 input.tar.gz
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas         0 Jun 26 03:04 boinc_lockfile
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas      2615 Jun 26 03:04 pandaJob.out
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas       467 Jun 26 03:04 setup.sh.local
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas   1033992 Jun 26 03:05 agis_schedconf.cvmfs.json
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas   1321363 Jun 26 03:05 cric_ddmendpoints.json
[2024-06-26 09:40:54] drwx------ 4 boincer umatlas      4096 Jun 26 03:05 pilot3
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas      6389 Jun 26 09:36 init_data.xml
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas 349417701 Jun 26 09:38 HITS.38920995._058426.pool.root.1
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas       531 Jun 26 09:38 boinc_task_state.xml
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas      1085 Jun 26 09:39 memory_monitor_summary.json
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas         0 Jun 26 09:39 agis_ddmendpoints.agis.ALL.json
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas    490693 Jun 26 09:39 log.38920995._058426.job.log.tgz.1
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas        95 Jun 26 09:39 pilot_heartbeat.json
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas      7758 Jun 26 09:40 heartbeat.json
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas        28 Jun 26 09:40 wrapper_checkpoint.txt
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 09:40 boinc_mmap_file
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas      4284 Jun 26 09:40 pilotlog.txt
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas   2151875 Jun 26 09:40 log.38920995._058426.job.log.1
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas       357 Jun 26 09:40 output.list
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas       620 Jun 26 09:40 runtime_log
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas   2662400 Jun 26 09:40 result.tar.gz
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas     11405 Jun 26 09:40 runtime_log.err
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas       653 Jun 26 09:40 HIWNDm6rbg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmhWoKDmPqgVpn.diag
[2024-06-26 09:40:54] -rw-r--r-- 1 boincer umatlas     21835 Jun 26 09:40 stderr.txt
[2024-06-26 09:40:54] HITS file was successfully produced:
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas 349417701 Jun 26 09:38 shared/HITS.pool.root.1
[2024-06-26 09:40:54]  *** Contents of shared directory: ***
[2024-06-26 09:40:54] total 962636
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas 633140116 Jun 26 03:04 ATLAS.root_0
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 03:04 start_atlas.sh
[2024-06-26 09:40:54] -rw-r--r-- 2 boincer umatlas    482517 Jun 26 03:04 input.tar.gz
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas 349417701 Jun 26 09:38 HITS.pool.root.1
[2024-06-26 09:40:54] -rw------- 1 boincer umatlas   2662400 Jun 26 09:40 result.tar.gz
09:40:55 (73343): run_atlas exited; CPU time 97392.623038
09:40:55 (73343): called boinc_finish(0)

</stderr_txt>
]]>

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