Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:24:27 (3885940): wrapper (7.7.26015): starting
20:24:27 (3885940): wrapper: running run_atlas (--nthreads 4)
[2024-06-26 20:24:27] Arguments: --nthreads 4
[2024-06-26 20:24:27] Threads: 4
[2024-06-26 20:24:27] Checking for CVMFS
[2024-06-26 20:24:27] No cvmfs_config command found, will try listing directly
[2024-06-26 20:24:27] CVMFS is ok
[2024-06-26 20:24:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 20:24:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 20:24:27] Further information can be found at the LHC@home message board.
[2024-06-26 20:24:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 20:24:27] Checking for apptainer binary...
[2024-06-26 20:24:27] which: no apptainer in ((null))
[2024-06-26 20:24:27] apptainer is not installed, using version from CVMFS
[2024-06-26 20:24:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 20:24:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-06-26 20:24:28] apptainer works
[2024-06-26 20:24:28] Set ATHENA_PROC_NUMBER=4
[2024-06-26 20:24:28] Set ATHENA_CORE_NUMBER=4
[2024-06-26 20:24:28] Starting ATLAS job with PandaID=6244375771
[2024-06-26 20:24:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 04:41:49]  *** The last 200 lines of the pilot log: ***
[2024-06-27 04:41:49] 2024-06-27 02:41:29,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 04:41:49] 2024-06-27 02:41:29,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 04:41:49] 2024-06-27 02:41:29,433 | INFO     | fitting pss+swap vs Time
[2024-06-27 04:41:49] 2024-06-27 02:41:29,433 | INFO     | model: linear, x: [1719426298.0, 1719426359.0, 1719426420.0, 1719426481.0, 1719426542.0, 1719426603.0, 1719426664.0, 1719426725.0, 1719426786.0, 1719426847.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,434 | INFO     | sum of square deviations: 36257944940.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,440 | INFO     | sum of deviations: 102087271142.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,440 | INFO     | mean x: 1719441182.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,440 | INFO     | mean y: 2367211.683026585
[2024-06-27 04:41:49] 2024-06-27 02:41:29,440 | INFO     | -- intersect: -4838862991.79455
[2024-06-27 04:41:49] 2024-06-27 02:41:29,440 | INFO     | intersect: -4838862991.79455
[2024-06-27 04:41:49] 2024-06-27 02:41:29,441 | INFO     | chi2: 4.7171420131485
[2024-06-27 04:41:49] 2024-06-27 02:41:29,442 | INFO     | model: linear, x: [1719426298.0, 1719426359.0, 1719426420.0, 1719426481.0, 1719426542.0, 1719426603.0, 1719426664.0, 1719426725.0, 1719426786.0, 1719426847.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,442 | INFO     | sum of square deviations: 35157068485.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,448 | INFO     | sum of deviations: 132525881534.99998
[2024-06-27 04:41:49] 2024-06-27 02:41:29,448 | INFO     | mean x: 1719441029.5
[2024-06-27 04:41:49] 2024-06-27 02:41:29,448 | INFO     | mean y: 2371392.276859504
[2024-06-27 04:41:49] 2024-06-27 02:41:29,448 | INFO     | -- intersect: -6479125729.110207
[2024-06-27 04:41:49] 2024-06-27 02:41:29,448 | INFO     | intersect: -6479125729.110207
[2024-06-27 04:41:49] 2024-06-27 02:41:29,449 | INFO     | chi2: 3.93827765302475
[2024-06-27 04:41:49] 2024-06-27 02:41:29,449 | INFO     | current chi2=3.93827765302475 (change=16.51136128513311 %)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,449 | INFO     | right removable region: 483
[2024-06-27 04:41:49] 2024-06-27 02:41:29,449 | INFO     | model: linear, x: [1719426603.0, 1719426664.0, 1719426725.0, 1719426786.0, 1719426847.0, 1719426908.0, 1719426969.0, 1719427030.0, 1719427091.0, 1719427152.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,450 | INFO     | sum of square deviations: 35157068485.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,455 | INFO     | sum of deviations: -8908501884.499996
[2024-06-27 04:41:49] 2024-06-27 02:41:29,455 | INFO     | mean x: 1719441334.5
[2024-06-27 04:41:49] 2024-06-27 02:41:29,455 | INFO     | mean y: 2382565.997933884
[2024-06-27 04:41:49] 2024-06-27 02:41:29,455 | INFO     | -- intersect: 438074363.6577933
[2024-06-27 04:41:49] 2024-06-27 02:41:29,456 | INFO     | intersect: 438074363.6577933
[2024-06-27 04:41:49] 2024-06-27 02:41:29,456 | INFO     | chi2: 2.458412493434415
[2024-06-27 04:41:49] 2024-06-27 02:41:29,456 | INFO     | current chi2=2.458412493434415 (change=47.88343266787668 %)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,457 | INFO     | model: linear, x: [1719426908.0, 1719426969.0, 1719427030.0, 1719427091.0, 1719427152.0, 1719427213.0, 1719427274.0, 1719427335.0, 1719427396.0, 1719427457.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,457 | INFO     | sum of square deviations: 34078704080.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,462 | INFO     | sum of deviations: -90316409435.99998
[2024-06-27 04:41:49] 2024-06-27 02:41:29,462 | INFO     | mean x: 1719441487.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,462 | INFO     | mean y: 2394078.444676409
[2024-06-27 04:41:49] 2024-06-27 02:41:29,462 | INFO     | -- intersect: 4559309769.15238
[2024-06-27 04:41:49] 2024-06-27 02:41:29,462 | INFO     | intersect: 4559309769.15238
[2024-06-27 04:41:49] 2024-06-27 02:41:29,463 | INFO     | chi2: 1.3337781080299287
[2024-06-27 04:41:49] 2024-06-27 02:41:29,463 | INFO     | current chi2=1.3337781080299287 (change=45.74636634039255 %)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,464 | INFO     | model: linear, x: [1719427213.0, 1719427274.0, 1719427335.0, 1719427396.0, 1719427457.0, 1719427518.0, 1719427579.0, 1719427640.0, 1719427701.0, 1719427762.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,464 | INFO     | sum of square deviations: 33022619162.5
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | sum of deviations: -113544068309.00002
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | mean x: 1719441639.5
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | mean y: 2397408.8734177216
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | -- intersect: 5914478398.210267
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | intersect: 5914478398.210267
[2024-06-27 04:41:49] 2024-06-27 02:41:29,469 | INFO     | chi2: 1.0766268022034333
[2024-06-27 04:41:49] 2024-06-27 02:41:29,470 | INFO     | current chi2=1.0766268022034333 (change=19.279916522720818 %)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,470 | INFO     | left removable region: 30
[2024-06-27 04:41:49] 2024-06-27 02:41:29,470 | INFO     | model: linear, x: [1719428128.0, 1719428189.0, 1719428250.0, 1719428311.0, 1719428372.0, 1719428433.0, 1719428494.0, 1719428555.0, 1719428616.0, 1719428677.0, 1719
[2024-06-27 04:41:49] 2024-06-27 02:41:29,470 | INFO     | sum of square deviations: 28825106042.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | sum of deviations: -41453195075.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | mean x: 1719441914.0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | mean y: 2395820.4326710817
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | -- intersect: 2475113907.829096
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | intersect: 2475113907.829096
[2024-06-27 04:41:49] 2024-06-27 02:41:29,475 | INFO     | chi2: 0.1995954225310745
[2024-06-27 04:41:49] 2024-06-27 02:41:29,476 | INFO     | -- intersect: 2475113907.829096
[2024-06-27 04:41:49] 2024-06-27 02:41:29,476 | INFO     | current memory leak: -1.44 B/s (using 453 data points, chi2=0.20)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,476 | INFO     | ..............................
[2024-06-27 04:41:49] 2024-06-27 02:41:29,476 | INFO     | . Timing measurements:
[2024-06-27 04:41:49] 2024-06-27 02:41:29,476 | INFO     | . get job = 0 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . initial setup = 1 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . payload setup = 4 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . stage-in = 0 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . payload execution = 29781 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . stage-out = 1 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | . log creation = 0 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,477 | INFO     | ..............................
[2024-06-27 04:41:49] 2024-06-27 02:41:29,544 | INFO     | 
[2024-06-27 04:41:49] 2024-06-27 02:41:29,544 | INFO     | job summary report
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | --------------------------------------------------
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | PanDA job id: 6244375771
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | task id: 38921013
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | errors: (none)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | pilot state: finished 
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | transexitcode: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,545 | INFO     | exeerrorcode: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | exeerrordiag: 
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | exitcode: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | exitmsg: OK
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | cpuconsumptiontime: 115311 s
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | nevents: 400
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | neventsw: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | pid: 3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | pgrp: 3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:29,546 | INFO     | corecount: 4
[2024-06-27 04:41:49] 2024-06-27 02:41:29,547 | INFO     | event service: False
[2024-06-27 04:41:49] 2024-06-27 02:41:29,547 | INFO     | sizes: {0: 2386869, 1: 2387068, 4: 2387274, 11: 2387302, 29790: 2425320, 29791: 2434302, 29794: 2434486, 29800: 2434656}
[2024-06-27 04:41:49] 2024-06-27 02:41:29,547 | INFO     | --------------------------------------------------
[2024-06-27 04:41:49] 2024-06-27 02:41:29,547 | INFO     | 
[2024-06-27 04:41:49] 2024-06-27 02:41:29,547 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-06-27 04:41:49] 2024-06-27 02:41:29,568 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,568 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,568 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,568 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,570 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 04:41:49] 2024-06-27 02:41:29,571 | INFO     | job 6244375771 has completed (purged errors)
[2024-06-27 04:41:49] 2024-06-27 02:41:29,571 | INFO     | overall cleanup function is called
[2024-06-27 04:41:49] 2024-06-27 02:41:30,579 | INFO     | --- collectZombieJob: --- 10, [3896399]
[2024-06-27 04:41:49] 2024-06-27 02:41:30,579 | INFO     | zombie collector waiting for pid 3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:30,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 04:41:49] 2024-06-27 02:41:31,584 | INFO     | collected zombie processes
[2024-06-27 04:41:49] 2024-06-27 02:41:31,585 | INFO     | will now attempt to kill all subprocesses of pid=3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:31,670 | INFO     | process IDs to be killed: [3896399] (in reverse order)
[2024-06-27 04:41:49] 2024-06-27 02:41:31,724 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 04:41:49] 2024-06-27 02:41:31,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 04:41:49] 2024-06-27 02:41:31,728 | INFO     | did not find any defunct processes belonging to 3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:31,732 | INFO     | did not find any defunct processes belonging to 3896399
[2024-06-27 04:41:49] 2024-06-27 02:41:31,732 | INFO     | ready for new job
[2024-06-27 04:41:49] 2024-06-27 02:41:31,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 04:41:49] 2024-06-27 02:41:31,735 | INFO     | *************************************
[2024-06-27 04:41:49] 2024-06-27 02:41:31,735 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 04:41:49] 2024-06-27 02:41:31,735 | INFO     | *************************************
[2024-06-27 04:41:49] 2024-06-27 02:41:31,735 | INFO     | 
[2024-06-27 04:41:49] 2024-06-27 02:41:31,737 | INFO     | architecture information:
[2024-06-27 04:41:49] 2024-06-27 02:41:31,738 | INFO     | executing command: cat /etc/os-release
[2024-06-27 04:41:49] 2024-06-27 02:41:31,749 | INFO     | cat /etc/os-release:
[2024-06-27 04:41:49] NAME="CentOS Linux"
[2024-06-27 04:41:49] VERSION="7 (Core)"
[2024-06-27 04:41:49] ID="centos"
[2024-06-27 04:41:49] ID_LIKE="rhel fedora"
[2024-06-27 04:41:49] VERSION_ID="7"
[2024-06-27 04:41:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 04:41:49] ANSI_COLOR="0;31"
[2024-06-27 04:41:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 04:41:49] HOME_URL="https://www.centos.org/"
[2024-06-27 04:41:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 04:41:49] 
[2024-06-27 04:41:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 04:41:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 04:41:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 04:41:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 04:41:49] 
[2024-06-27 04:41:49] 2024-06-27 02:41:31,749 | INFO     | *************************************
[2024-06-27 04:41:49] 2024-06-27 02:41:32,252 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-06-27 04:41:49] 2024-06-27 02:41:32,273 | INFO     | sufficient remaining disk space (1696351649792 B)
[2024-06-27 04:41:49] 2024-06-27 02:41:32,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 04:41:49] 2024-06-27 02:41:32,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 04:41:49] 2024-06-27 02:41:32,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 04:41:49] 2024-06-27 02:41:32,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 04:41:49] 2024-06-27 02:41:32,356 | INFO     | aborting loop
[2024-06-27 04:41:49] 2024-06-27 02:41:32,549 | INFO     | all data control threads have been joined
[2024-06-27 04:41:49] 2024-06-27 02:41:33,053 | INFO     | all payload control threads have been joined
[2024-06-27 04:41:49] 2024-06-27 02:41:33,247 | INFO     | all job control threads have been joined
[2024-06-27 04:41:49] 2024-06-27 02:41:33,277 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 04:41:49] 2024-06-27 02:41:33,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 04:41:49] 2024-06-27 02:41:33,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 04:41:49] 2024-06-27 02:41:33,279 | INFO     | [job] retrieve thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:33,362 | INFO     | [job] job monitor thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:33,428 | INFO     | [data] copytool_in thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:33,554 | INFO     | [data] control thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:33,610 | INFO     | [payload] validate_post thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:33,712 | INFO     | [payload] failed_post thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,059 | INFO     | [payload] control thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,165 | INFO     | [job] validate thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,183 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,236 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,253 | INFO     | [job] control thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,279 | INFO     | [data] copytool_out thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:34,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 04:41:49] 2024-06-27 02:41:34,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 04:41:49] 2024-06-27 02:41:34,638 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:35,560 | INFO     | [job] queue monitor thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:38,314 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:42,399 | INFO     | job.realtimelogging is not enabled
[2024-06-27 04:41:49] 2024-06-27 02:41:43,403 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 04:41:49] 2024-06-27 02:41:43,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47375420740672)>', '<ExcThread(monitor, started 47375601014528)>']
[2024-06-27 04:41:49] 2024-06-27 02:41:44,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 04:41:49] 2024-06-27 02:41:44,328 | INFO     | [monitor] control thread has ended
[2024-06-27 04:41:49] 2024-06-27 02:41:48,729 | INFO     | all workflow threads have been joined
[2024-06-27 04:41:49] 2024-06-27 02:41:48,729 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 04:41:49] 2024-06-27 02:41:48,730 | INFO     | traces error code: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:48,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 04:41:49] 2024-06-27 02:41:48,821 [wrapper] ==== pilot stdout END ====
[2024-06-27 04:41:49] 2024-06-27 02:41:48,824 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 04:41:49] 2024-06-27 02:41:48,828 [wrapper] pilotpid: 3889604
[2024-06-27 04:41:49] 2024-06-27 02:41:48,830 [wrapper] Pilot exit status: 0
[2024-06-27 04:41:49] 2024-06-27 02:41:48,841 [wrapper] pandaids: 6244375771
[2024-06-27 04:41:49] 2024-06-27 02:41:48,882 [wrapper] cleanup supervisor_pilot  103788 3889605
[2024-06-27 04:41:49] 2024-06-27 02:41:48,886 [wrapper] Test setup, not cleaning
[2024-06-27 04:41:49] 2024-06-27 02:41:48,889 [wrapper] ==== wrapper stdout END ====
[2024-06-27 04:41:49] 2024-06-27 02:41:48,892 [wrapper] ==== wrapper stderr END ====
[2024-06-27 04:41:49] 2024-06-27 02:41:48,898 [wrapper] apfmon messages muted
[2024-06-27 04:41:49]  *** Error codes and diagnostics ***
[2024-06-27 04:41:49]     "exeErrorCode": 0,
[2024-06-27 04:41:49]     "exeErrorDiag": "",
[2024-06-27 04:41:49]     "pilotErrorCode": 0,
[2024-06-27 04:41:49]     "pilotErrorDiag": "",
[2024-06-27 04:41:49]  *** Listing of results directory ***
[2024-06-27 04:41:49] total 872408
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc    469766 Jun 26 03:49 pilot3.tar.gz
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc      5654 Jun 26 03:51 queuedata.json
[2024-06-27 04:41:49] -rwx------ 1 boinc boinc     32220 Jun 26 03:52 runpilot2-wrapper.sh
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc       100 Jun 26 20:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 04:41:49] -rwxr-xr-x 1 boinc boinc      7986 Jun 26 20:24 run_atlas
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc       105 Jun 26 20:24 job.xml
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc      6454 Jun 26 20:24 init_data.xml
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc 540755697 Jun 26 20:24 EVNT.38776210._000376.pool.root.1
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc     17537 Jun 26 20:24 start_atlas.sh
[2024-06-27 04:41:49] drwxrwx--x 2 boinc boinc      4096 Jun 26 20:24 shared
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc    482520 Jun 26 20:24 input.tar.gz
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc         0 Jun 26 20:24 boinc_lockfile
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc      2645 Jun 26 20:24 pandaJob.out
[2024-06-27 04:41:49] -rw------- 1 boinc boinc       424 Jun 26 20:24 setup.sh.local
[2024-06-27 04:41:49] -rw------- 1 boinc boinc   1034751 Jun 26 20:24 agis_schedconf.cvmfs.json
[2024-06-27 04:41:49] -rw------- 1 boinc boinc   1321363 Jun 26 20:24 cric_ddmendpoints.json
[2024-06-27 04:41:49] drwx------ 4 boinc boinc      4096 Jun 26 20:24 pilot3
[2024-06-27 04:41:49] -rw------- 1 boinc boinc 341184324 Jun 27 04:40 HITS.38921013._055402.pool.root.1
[2024-06-27 04:41:49] -rw------- 1 boinc boinc        95 Jun 27 04:40 pilot_heartbeat.json
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc       532 Jun 27 04:41 boinc_task_state.xml
[2024-06-27 04:41:49] -rw------- 1 boinc boinc      1044 Jun 27 04:41 memory_monitor_summary.json
[2024-06-27 04:41:49] -rw------- 1 boinc boinc         0 Jun 27 04:41 agis_ddmendpoints.agis.ALL.json
[2024-06-27 04:41:49] -rw------- 1 boinc boinc    507439 Jun 27 04:41 log.38921013._055402.job.log.tgz.1
[2024-06-27 04:41:49] -rw------- 1 boinc boinc      7766 Jun 27 04:41 heartbeat.json
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc      8192 Jun 27 04:41 boinc_mmap_file
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc        29 Jun 27 04:41 wrapper_checkpoint.txt
[2024-06-27 04:41:49] -rw------- 1 boinc boinc      4294 Jun 27 04:41 pilotlog.txt
[2024-06-27 04:41:49] -rw------- 1 boinc boinc   3421737 Jun 27 04:41 log.38921013._055402.job.log.1
[2024-06-27 04:41:49] -rw------- 1 boinc boinc       357 Jun 27 04:41 output.list
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc       620 Jun 27 04:41 runtime_log
[2024-06-27 04:41:49] -rw------- 1 boinc boinc   3952640 Jun 27 04:41 result.tar.gz
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc     11410 Jun 27 04:41 runtime_log.err
[2024-06-27 04:41:49] -rw------- 1 boinc boinc       659 Jun 27 04:41 qtIODmq0Wg5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmm6YKDm7HO9Em.diag
[2024-06-27 04:41:49] -rw-r--r-- 1 boinc boinc     21272 Jun 27 04:41 stderr.txt
[2024-06-27 04:41:49] HITS file was successfully produced:
[2024-06-27 04:41:49] -rw------- 1 boinc boinc 341184324 Jun 27 04:40 shared/HITS.pool.root.1
[2024-06-27 04:41:49]  *** Contents of shared directory: ***
[2024-06-27 04:41:49] total 865632
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc 540755697 Jun 26 20:24 ATLAS.root_0
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc     17537 Jun 26 20:24 start_atlas.sh
[2024-06-27 04:41:49] -rw-r--r-- 2 boinc boinc    482520 Jun 26 20:24 input.tar.gz
[2024-06-27 04:41:49] -rw------- 1 boinc boinc 341184324 Jun 27 04:40 HITS.pool.root.1
[2024-06-27 04:41:49] -rw------- 1 boinc boinc   3952640 Jun 27 04:41 result.tar.gz
04:41:51 (3885940): run_atlas exited; CPU time 115053.522645
04:41:51 (3885940): called boinc_finish(0)

</stderr_txt>
]]>

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