Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:06 (21277): wrapper (7.7.26015): starting
12:42:06 (21277): wrapper: running run_atlas (--nthreads 8)
[2024-06-25 12:42:06] Arguments: --nthreads 8
[2024-06-25 12:42:06] Threads: 8
[2024-06-25 12:42:06] Checking for CVMFS
[2024-06-25 12:42:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-25 12:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-25 12:42:07] Running cvmfs_config stat atlas.cern.ch
[2024-06-25 12:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-25 12:42:08] 2.11.2.0 16934 5714 235192 134284 3 128 13143545 18432001 26812 130560 0 48360710 99.744 22170685 35270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-25 12:42:08] CVMFS is ok
[2024-06-25 12:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 12:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 12:42:08] Further information can be found at the LHC@home message board.
[2024-06-25 12:42:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 12:42:08] Checking for apptainer binary...
[2024-06-25 12:42:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-25 12:42:08] Running /usr/bin/apptainer --version
[2024-06-25 12:42:08] apptainer version 1.3.2-1.el7
[2024-06-25 12:42:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 12:42:23] c-211-40.aglt2.org
[2024-06-25 12:42:23] apptainer works
[2024-06-25 12:42:23] Set ATHENA_PROC_NUMBER=8
[2024-06-25 12:42:23] Set ATHENA_CORE_NUMBER=8
[2024-06-25 12:42:23] Starting ATLAS job with PandaID=6244003140
[2024-06-25 12:42:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 22:13:13]  *** The last 200 lines of the pilot log: ***
[2024-06-25 22:13:13] 2024-06-26 02:12:35,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:38,062 | INFO     | monitor loop #2261: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:38,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:40,566 | INFO     | monitor loop #2262: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:40,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:43,075 | INFO     | monitor loop #2263: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:43,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:45,580 | INFO     | monitor loop #2264: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:45,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:48,087 | INFO     | monitor loop #2265: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:48,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:50,592 | INFO     | monitor loop #2266: job 0:6244003140 is in state 'finished'
[2024-06-25 22:13:13] 2024-06-26 02:12:50,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,069 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-25 22:13:13] 2024-06-26 02:12:51,070 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6244003140/memory_monitor_summary.json (trf name=prmon)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,071 | INFO     | extracted standard info from prmon json
[2024-06-25 22:13:13] 2024-06-26 02:12:51,071 | INFO     | extracted standard memory fields from prmon json
[2024-06-25 22:13:13] 2024-06-26 02:12:51,071 | WARNING  | GPU info not found in prmon json
[2024-06-25 22:13:13] 2024-06-26 02:12:51,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-25 22:13:13] 2024-06-26 02:12:51,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-25 22:13:13] 2024-06-26 02:12:51,078 | INFO     | fitting pss+swap vs Time
[2024-06-25 22:13:13] 2024-06-26 02:12:51,079 | INFO     | model: linear, x: [1719334173.0, 1719334234.0, 1719334295.0, 1719334356.0, 1719334417.0, 1719334478.0, 1719334539.0, 1719334600.0, 1719334661.0, 1719334722.0, 1719
[2024-06-25 22:13:13] 2024-06-26 02:12:51,079 | INFO     | sum of square deviations: 52723769545.46033
[2024-06-25 22:13:13] 2024-06-26 02:12:51,085 | INFO     | sum of deviations: 1259758619749.127
[2024-06-25 22:13:13] 2024-06-26 02:12:51,085 | INFO     | mean x: 1719351039.5433214
[2024-06-25 22:13:13] 2024-06-26 02:12:51,085 | INFO     | mean y: 2409471.723826715
[2024-06-25 22:13:13] 2024-06-26 02:12:51,085 | INFO     | -- intersect: -41079009992.63648
[2024-06-25 22:13:13] 2024-06-26 02:12:51,085 | INFO     | intersect: -41079009992.63648
[2024-06-25 22:13:13] 2024-06-26 02:12:51,086 | INFO     | chi2: 20.2046690816068
[2024-06-25 22:13:13] 2024-06-26 02:12:51,086 | INFO     | model: linear, x: [1719334173.0, 1719334234.0, 1719334295.0, 1719334356.0, 1719334417.0, 1719334478.0, 1719334539.0, 1719334600.0, 1719334661.0, 1719334722.0, 1719
[2024-06-25 22:13:13] 2024-06-26 02:12:51,086 | INFO     | sum of square deviations: 51309080572.95063
[2024-06-25 22:13:13] 2024-06-26 02:12:51,092 | INFO     | sum of deviations: 1284889247273.7974
[2024-06-25 22:13:13] 2024-06-26 02:12:51,092 | INFO     | mean x: 1719350887.043716
[2024-06-25 22:13:13] 2024-06-26 02:12:51,092 | INFO     | mean y: 2412150.883424408
[2024-06-25 22:13:13] 2024-06-26 02:12:51,092 | INFO     | -- intersect: -43053815760.12264
[2024-06-25 22:13:13] 2024-06-26 02:12:51,092 | INFO     | intersect: -43053815760.12264
[2024-06-25 22:13:13] 2024-06-26 02:12:51,093 | INFO     | chi2: 19.436054759531082
[2024-06-25 22:13:13] 2024-06-26 02:12:51,093 | INFO     | current chi2=19.436054759531082 (change=3.8041420969147186 %)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,093 | INFO     | right removable region: 548
[2024-06-25 22:13:13] 2024-06-26 02:12:51,093 | INFO     | model: linear, x: [1719334478.0, 1719334539.0, 1719334600.0, 1719334661.0, 1719334722.0, 1719334783.0, 1719334844.0, 1719334905.0, 1719334966.0, 1719335027.0, 1719
[2024-06-25 22:13:13] 2024-06-26 02:12:51,093 | INFO     | sum of square deviations: 51309065932.950615
[2024-06-25 22:13:13] 2024-06-26 02:12:51,098 | INFO     | sum of deviations: 1073272072627.8412
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | mean x: 1719351192.043716
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | mean y: 2429567.8816029145
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | -- intersect: -35962591114.25947
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | intersect: -35962591114.25947
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | chi2: 15.472957590425136
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | current chi2=15.472957590425136 (change=23.418901205806677 %)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,099 | INFO     | left removable region: 10
[2024-06-25 22:13:13] 2024-06-26 02:12:51,100 | INFO     | model: linear, x: [1719334783.0, 1719334844.0, 1719334905.0, 1719334966.0, 1719335027.0, 1719335088.0, 1719335149.0, 1719335210.0, 1719335271.0, 1719335332.0, 1719
[2024-06-25 22:13:13] 2024-06-26 02:12:51,100 | INFO     | sum of square deviations: 48286292581.42952
[2024-06-25 22:13:13] 2024-06-26 02:12:51,105 | INFO     | sum of deviations: 953038238784.0074
[2024-06-25 22:13:13] 2024-06-26 02:12:51,105 | INFO     | mean x: 1719351161.5446095
[2024-06-25 22:13:13] 2024-06-26 02:12:51,105 | INFO     | mean y: 2448410.4163568774
[2024-06-25 22:13:13] 2024-06-26 02:12:51,105 | INFO     | -- intersect: -33932801434.793465
[2024-06-25 22:13:13] 2024-06-26 02:12:51,105 | INFO     | intersect: -33932801434.793465
[2024-06-25 22:13:13] 2024-06-26 02:12:51,106 | INFO     | chi2: 11.9726549821553
[2024-06-25 22:13:13] 2024-06-26 02:12:51,106 | INFO     | -- intersect: -33932801434.793465
[2024-06-25 22:13:13] 2024-06-26 02:12:51,106 | INFO     | current memory leak: 19.74 B/s (using 538 data points, chi2=11.97)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | ..............................
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . Timing measurements:
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . get job = 0 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . initial setup = 4 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . payload setup = 85 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . stage-in = 0 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . payload execution = 33879 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . stage-out = 2 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | . log creation = 0 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,107 | INFO     | ..............................
[2024-06-25 22:13:13] 2024-06-26 02:12:51,183 | INFO     | 
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | job summary report
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | --------------------------------------------------
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | PanDA job id: 6244003140
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | task id: 38921001
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | errors: (none)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | pilot state: finished 
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | transexitcode: 0
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | exeerrorcode: 0
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | exeerrordiag: 
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | exitcode: 0
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | exitmsg: OK
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | cpuconsumptiontime: 114343 s
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | nevents: 400
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | neventsw: 0
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | pid: 24851
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | pgrp: 24851
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | corecount: 8
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | event service: False
[2024-06-25 22:13:13] 2024-06-26 02:12:51,184 | INFO     | sizes: {0: 2386990, 1: 2387189, 12: 2387189, 23: 2387217, 34: 2387245, 45: 2387273, 54: 2387635, 56: 2387663, 33969: 2427254, 33972: 2436270, 33994: 2436384}
[2024-06-25 22:13:13] 2024-06-26 02:12:51,185 | INFO     | --------------------------------------------------
[2024-06-25 22:13:13] 2024-06-26 02:12:51,185 | INFO     | 
[2024-06-25 22:13:13] 2024-06-26 02:12:51,185 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-25 22:13:13] 2024-06-26 02:12:51,306 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,308 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 22:13:13] 2024-06-26 02:12:51,308 | INFO     | job 6244003140 has completed (purged errors)
[2024-06-25 22:13:13] 2024-06-26 02:12:51,308 | INFO     | overall cleanup function is called
[2024-06-25 22:13:13] 2024-06-26 02:12:52,315 | INFO     | --- collectZombieJob: --- 10, [24851]
[2024-06-25 22:13:13] 2024-06-26 02:12:52,315 | INFO     | zombie collector waiting for pid 24851
[2024-06-25 22:13:13] 2024-06-26 02:12:52,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 22:13:13] 2024-06-26 02:12:53,322 | INFO     | collected zombie processes
[2024-06-25 22:13:13] 2024-06-26 02:12:53,322 | INFO     | will now attempt to kill all subprocesses of pid=24851
[2024-06-25 22:13:13] 2024-06-26 02:12:53,647 | INFO     | process IDs to be killed: [24851] (in reverse order)
[2024-06-25 22:13:13] 2024-06-26 02:12:53,897 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 22:13:13] 2024-06-26 02:12:53,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 22:13:13] 2024-06-26 02:12:53,910 | INFO     | did not find any defunct processes belonging to 24851
[2024-06-25 22:13:13] 2024-06-26 02:12:53,921 | INFO     | did not find any defunct processes belonging to 24851
[2024-06-25 22:13:13] 2024-06-26 02:12:53,921 | INFO     | ready for new job
[2024-06-25 22:13:13] 2024-06-26 02:12:53,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 22:13:13] 2024-06-26 02:12:53,924 | INFO     | *************************************
[2024-06-25 22:13:13] 2024-06-26 02:12:53,924 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 22:13:13] 2024-06-26 02:12:53,924 | INFO     | *************************************
[2024-06-25 22:13:13] 2024-06-26 02:12:53,924 | INFO     | 
[2024-06-25 22:13:13] 2024-06-26 02:12:53,927 | INFO     | architecture information:
[2024-06-25 22:13:13] 2024-06-26 02:12:53,931 | INFO     | executing command: cat /etc/os-release
[2024-06-25 22:13:13] 2024-06-26 02:12:53,995 | INFO     | cat /etc/os-release:
[2024-06-25 22:13:13] NAME="CentOS Linux"
[2024-06-25 22:13:13] VERSION="7 (Core)"
[2024-06-25 22:13:13] ID="centos"
[2024-06-25 22:13:13] ID_LIKE="rhel fedora"
[2024-06-25 22:13:13] VERSION_ID="7"
[2024-06-25 22:13:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 22:13:13] ANSI_COLOR="0;31"
[2024-06-25 22:13:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 22:13:13] HOME_URL="https://www.centos.org/"
[2024-06-25 22:13:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 22:13:13] 
[2024-06-25 22:13:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 22:13:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 22:13:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 22:13:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 22:13:13] 
[2024-06-25 22:13:13] 2024-06-26 02:12:53,995 | INFO     | *************************************
[2024-06-25 22:13:13] 2024-06-26 02:12:54,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-25 22:13:13] 2024-06-26 02:12:54,510 | INFO     | sufficient remaining disk space (74156343296 B)
[2024-06-25 22:13:13] 2024-06-26 02:12:54,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 22:13:13] 2024-06-26 02:12:54,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 22:13:13] 2024-06-26 02:12:54,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 22:13:13] 2024-06-26 02:12:54,511 | INFO     | aborting loop
[2024-06-25 22:13:13] 2024-06-26 02:12:54,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 22:13:13] 2024-06-26 02:12:54,582 | INFO     | all data control threads have been joined
[2024-06-25 22:13:13] 2024-06-26 02:12:54,684 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 22:13:13] 2024-06-26 02:12:54,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 22:13:13] 2024-06-26 02:12:54,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 22:13:13] 2024-06-26 02:12:54,715 | INFO     | all job control threads have been joined
[2024-06-25 22:13:13] 2024-06-26 02:12:54,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 22:13:13] 2024-06-26 02:12:55,439 | INFO     | all payload control threads have been joined
[2024-06-25 22:13:13] 2024-06-26 02:12:55,516 | INFO     | [job] retrieve thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:55,516 | INFO     | [job] job monitor thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:55,588 | INFO     | [data] control thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:55,619 | INFO     | [job] validate thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:55,723 | INFO     | [job] control thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:55,725 | INFO     | [data] copytool_in thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,062 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 22:13:13] 2024-06-26 02:12:56,445 | INFO     | [payload] control thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,524 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,590 | INFO     | [payload] validate_post thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,696 | INFO     | [payload] failed_post thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,873 | INFO     | [data] copytool_out thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:56,955 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:57,203 | INFO     | [job] queue monitor thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:12:58,521 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:13:04,775 | INFO     | job.realtimelogging is not enabled
[2024-06-25 22:13:13] 2024-06-26 02:13:05,781 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 22:13:13] 2024-06-26 02:13:07,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127802566464)>', '<ExcThread(monitor, started 140126999017216)>']
[2024-06-25 22:13:13] 2024-06-26 02:13:07,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 22:13:13] 2024-06-26 02:13:07,757 | INFO     | [monitor] control thread has ended
[2024-06-25 22:13:13] 2024-06-26 02:13:12,526 | INFO     | all workflow threads have been joined
[2024-06-25 22:13:13] 2024-06-26 02:13:12,530 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 22:13:13] 2024-06-26 02:13:12,531 | INFO     | traces error code: 0
[2024-06-25 22:13:13] 2024-06-26 02:13:12,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 22:13:13] 2024-06-26 02:13:12,687 [wrapper] ==== pilot stdout END ====
[2024-06-25 22:13:13] 2024-06-26 02:13:12,736 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 22:13:13] 2024-06-26 02:13:12,777 [wrapper] pilotpid: 14215
[2024-06-25 22:13:13] 2024-06-26 02:13:12,819 [wrapper] Pilot exit status: 0
[2024-06-25 22:13:13] 2024-06-26 02:13:13,036 [wrapper] pandaids: 6244003140
[2024-06-25 22:13:13] 2024-06-26 02:13:13,164 [wrapper] cleanup supervisor_pilot 43829 14216
[2024-06-25 22:13:13] 2024-06-26 02:13:13,230 [wrapper] Test setup, not cleaning
[2024-06-25 22:13:13] 2024-06-26 02:13:13,260 [wrapper] ==== wrapper stdout END ====
[2024-06-25 22:13:13] 2024-06-26 02:13:13,283 [wrapper] ==== wrapper stderr END ====
[2024-06-25 22:13:13] 2024-06-26 02:13:13,301 [wrapper] apfmon messages muted
[2024-06-25 22:13:13]  *** Error codes and diagnostics ***
[2024-06-25 22:13:13]     "exeErrorCode": 0,
[2024-06-25 22:13:13]     "exeErrorDiag": "",
[2024-06-25 22:13:13]     "pilotErrorCode": 0,
[2024-06-25 22:13:13]     "pilotErrorDiag": "",
[2024-06-25 22:13:13]  *** Listing of results directory ***
[2024-06-25 22:13:13] total 955616
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas    469766 Jun 25 12:25 pilot3.tar.gz
[2024-06-25 22:13:13] -rwx------ 1 boincer umatlas     32220 Jun 25 12:40 runpilot2-wrapper.sh
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas      5654 Jun 25 12:40 queuedata.json
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas       100 Jun 25 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 22:13:13] -rwxr-xr-x 1 boincer umatlas      7986 Jun 25 12:42 run_atlas
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas       105 Jun 25 12:42 job.xml
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas 615784758 Jun 25 12:42 EVNT.38776190._000738.pool.root.1
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 12:42 start_atlas.sh
[2024-06-25 22:13:13] drwxrwx--x 2 boincer umatlas      4096 Jun 25 12:42 shared
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas    482534 Jun 25 12:42 input.tar.gz
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas         0 Jun 25 12:42 boinc_lockfile
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas      2655 Jun 25 12:42 pandaJob.out
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas       467 Jun 25 12:42 setup.sh.local
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas   1033810 Jun 25 12:44 agis_schedconf.cvmfs.json
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas   1321363 Jun 25 12:44 cric_ddmendpoints.json
[2024-06-25 22:13:13] drwx------ 4 boincer umatlas      4096 Jun 25 12:44 pilot3
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas      6340 Jun 25 22:09 init_data.xml
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas 351652467 Jun 25 22:11 HITS.38921001._065494.pool.root.1
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas       533 Jun 25 22:11 boinc_task_state.xml
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas        95 Jun 25 22:12 pilot_heartbeat.json
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas      1093 Jun 25 22:12 memory_monitor_summary.json
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas         0 Jun 25 22:12 agis_ddmendpoints.agis.ALL.json
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas    598982 Jun 25 22:12 log.38921001._065494.job.log.tgz.1
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas      7781 Jun 25 22:12 heartbeat.json
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas      4283 Jun 25 22:13 pilotlog.txt
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas      8192 Jun 25 22:13 boinc_mmap_file
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas        29 Jun 25 22:13 wrapper_checkpoint.txt
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas   3182594 Jun 25 22:13 log.38921001._065494.job.log.1
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas       357 Jun 25 22:13 output.list
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas       620 Jun 25 22:13 runtime_log
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas   3799040 Jun 25 22:13 result.tar.gz
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas     11405 Jun 25 22:13 runtime_log.err
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas       655 Jun 25 22:13 LERMDmoOOg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmnRoKDmzoqR9n.diag
[2024-06-25 22:13:13] -rw-r--r-- 1 boincer umatlas     21880 Jun 25 22:13 stderr.txt
[2024-06-25 22:13:13] HITS file was successfully produced:
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas 351652467 Jun 25 22:11 shared/HITS.pool.root.1
[2024-06-25 22:13:13]  *** Contents of shared directory: ***
[2024-06-25 22:13:13] total 948980
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas 615784758 Jun 25 12:42 ATLAS.root_0
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 12:42 start_atlas.sh
[2024-06-25 22:13:13] -rw-r--r-- 2 boincer umatlas    482534 Jun 25 12:42 input.tar.gz
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas 351652467 Jun 25 22:11 HITS.pool.root.1
[2024-06-25 22:13:13] -rw------- 1 boincer umatlas   3799040 Jun 25 22:13 result.tar.gz
22:13:15 (21277): run_atlas exited; CPU time 111334.529836
22:13:15 (21277): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN