Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:43 (33156): wrapper (7.7.26015): starting
12:31:43 (33156): wrapper: running run_atlas (--nthreads 8)
[2024-06-25 12:31:43] Arguments: --nthreads 8
[2024-06-25 12:31:43] Threads: 8
[2024-06-25 12:31:43] Checking for CVMFS
[2024-06-25 12:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-25 12:31:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-25 12:31:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-25 12:31:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-25 12:31:45] 2.11.2.0 2604 21275 154476 134284 1 98 16872758 18432001 17715 130560 0 30671588 99.312 38936153 58731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-25 12:31:45] CVMFS is ok
[2024-06-25 12:31:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 12:31:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 12:31:45] Further information can be found at the LHC@home message board.
[2024-06-25 12:31:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 12:31:45] Checking for apptainer binary...
[2024-06-25 12:31:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-25 12:31:45] Running /usr/bin/apptainer --version
[2024-06-25 12:31:45] apptainer version 1.3.1-1.el7
[2024-06-25 12:31:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 12:31:58] c-212-5.aglt2.org
[2024-06-25 12:31:58] apptainer works
[2024-06-25 12:31:58] Set ATHENA_PROC_NUMBER=8
[2024-06-25 12:31:58] Set ATHENA_CORE_NUMBER=8
[2024-06-25 12:31:58] Starting ATLAS job with PandaID=6243996991
[2024-06-25 12:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 17:57:06]  *** The last 200 lines of the pilot log: ***
[2024-06-25 17:57:07] 2024-06-25 21:56:37,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 17:57:07] 2024-06-25 21:56:40,083 | INFO     | monitor loop #1388: job 0:6243996991 is in state 'finished'
[2024-06-25 17:57:07] 2024-06-25 21:56:40,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,355 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-25 17:57:07] 2024-06-25 21:56:42,355 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6243996991/memory_monitor_summary.json (trf name=prmon)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,356 | INFO     | extracted standard info from prmon json
[2024-06-25 17:57:07] 2024-06-25 21:56:42,356 | INFO     | extracted standard memory fields from prmon json
[2024-06-25 17:57:07] 2024-06-25 21:56:42,356 | WARNING  | GPU info not found in prmon json
[2024-06-25 17:57:07] 2024-06-25 21:56:42,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-25 17:57:07] 2024-06-25 21:56:42,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-25 17:57:07] 2024-06-25 21:56:42,362 | INFO     | fitting pss+swap vs Time
[2024-06-25 17:57:07] 2024-06-25 21:56:42,362 | INFO     | model: linear, x: [1719333517.0, 1719333578.0, 1719333639.0, 1719333700.0, 1719333761.0, 1719333822.0, 1719333883.0, 1719333944.0, 1719334005.0, 1719334066.0, 1719
[2024-06-25 17:57:07] 2024-06-25 21:56:42,363 | INFO     | sum of square deviations: 9417518263.073708
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | sum of deviations: 628650805350.9741
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | mean x: 1719343002.5544872
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | mean y: 2314181.5897435895
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | -- intersect: -114769575082.33032
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | intersect: -114769575082.33032
[2024-06-25 17:57:07] 2024-06-25 21:56:42,365 | INFO     | chi2: 17.567065433548496
[2024-06-25 17:57:07] 2024-06-25 21:56:42,366 | INFO     | model: linear, x: [1719333517.0, 1719333578.0, 1719333639.0, 1719333700.0, 1719333761.0, 1719333822.0, 1719333883.0, 1719333944.0, 1719334005.0, 1719334066.0, 1719
[2024-06-25 17:57:07] 2024-06-25 21:56:42,366 | INFO     | sum of square deviations: 8971970908.058588
[2024-06-25 17:57:07] 2024-06-25 21:56:42,367 | INFO     | sum of deviations: 616638756639.0946
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | mean x: 1719342850.0553746
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | mean y: 2310070.700325733
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | -- intersect: -118167203424.06412
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | intersect: -118167203424.06412
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | chi2: 17.48354251263594
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | current chi2=17.48354251263594 (change=0.47545175503843845 %)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | right removable region: 306
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | model: linear, x: [1719333822.0, 1719333883.0, 1719333944.0, 1719334005.0, 1719334066.0, 1719334127.0, 1719334188.0, 1719334249.0, 1719334310.0, 1719334371.0, 1719
[2024-06-25 17:57:07] 2024-06-25 21:56:42,368 | INFO     | sum of square deviations: 8971960538.058588
[2024-06-25 17:57:07] 2024-06-25 21:56:42,370 | INFO     | sum of deviations: 528272092959.5534
[2024-06-25 17:57:07] 2024-06-25 21:56:42,370 | INFO     | mean x: 1719343155.0553746
[2024-06-25 17:57:07] 2024-06-25 21:56:42,370 | INFO     | mean y: 2348517.9674267103
[2024-06-25 17:57:07] 2024-06-25 21:56:42,370 | INFO     | -- intersect: -101233162180.49187
[2024-06-25 17:57:07] 2024-06-25 21:56:42,370 | INFO     | intersect: -101233162180.49187
[2024-06-25 17:57:07] 2024-06-25 21:56:42,371 | INFO     | chi2: 12.967967141296398
[2024-06-25 17:57:07] 2024-06-25 21:56:42,371 | INFO     | current chi2=12.967967141296398 (change=26.180230896556147 %)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,371 | INFO     | model: linear, x: [1719334127.0, 1719334188.0, 1719334249.0, 1719334310.0, 1719334371.0, 1719334432.0, 1719334493.0, 1719334554.0, 1719334615.0, 1719334676.0, 1719
[2024-06-25 17:57:07] 2024-06-25 21:56:42,371 | INFO     | sum of square deviations: 8540682150.543049
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | sum of deviations: 450533398067.285
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | mean x: 1719343307.5562913
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | mean y: 2375976.218543046
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | -- intersect: -90695482712.77711
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | intersect: -90695482712.77711
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | chi2: 10.540707906879254
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | current chi2=10.540707906879254 (change=18.71734565618658 %)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,373 | INFO     | left removable region: 20
[2024-06-25 17:57:07] 2024-06-25 21:56:42,374 | INFO     | model: linear, x: [1719334737.0, 1719334799.0, 1719334859.0, 1719334920.0, 1719334981.0, 1719335042.0, 1719335103.0, 1719335164.0, 1719335225.0, 1719335286.0, 1719
[2024-06-25 17:57:07] 2024-06-25 21:56:42,374 | INFO     | sum of square deviations: 7253834506.604923
[2024-06-25 17:57:07] 2024-06-25 21:56:42,375 | INFO     | sum of deviations: 315514276584.85333
[2024-06-25 17:57:07] 2024-06-25 21:56:42,375 | INFO     | mean x: 1719343429.555944
[2024-06-25 17:57:07] 2024-06-25 21:56:42,375 | INFO     | mean y: 2420297.321678322
[2024-06-25 17:57:07] 2024-06-25 21:56:42,375 | INFO     | -- intersect: -74782494892.47424
[2024-06-25 17:57:07] 2024-06-25 21:56:42,375 | INFO     | intersect: -74782494892.47424
[2024-06-25 17:57:07] 2024-06-25 21:56:42,376 | INFO     | chi2: 7.465957062300551
[2024-06-25 17:57:07] 2024-06-25 21:56:42,376 | INFO     | -- intersect: -74782494892.47424
[2024-06-25 17:57:07] 2024-06-25 21:56:42,376 | INFO     | current memory leak: 43.50 B/s (using 286 data points, chi2=7.47)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | ..............................
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . Timing measurements:
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . get job = 0 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . initial setup = 5 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . payload setup = 84 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . stage-in = 0 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . payload execution = 19125 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . stage-out = 2 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | . log creation = 0 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,377 | INFO     | ..............................
[2024-06-25 17:57:07] 2024-06-25 21:56:42,459 | INFO     | 
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | job summary report
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | --------------------------------------------------
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | PanDA job id: 6243996991
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | task id: 38776146
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | errors: (none)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | pilot state: finished 
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | transexitcode: 0
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | exeerrorcode: 0
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | exeerrordiag: 
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | exitcode: 0
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | exitmsg: OK
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | cpuconsumptiontime: 56291 s
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | nevents: 400
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | neventsw: 0
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | pid: 97050
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | pgrp: 97050
[2024-06-25 17:57:07] 2024-06-25 21:56:42,460 | INFO     | corecount: 8
[2024-06-25 17:57:07] 2024-06-25 21:56:42,461 | INFO     | event service: False
[2024-06-25 17:57:07] 2024-06-25 21:56:42,461 | INFO     | sizes: {0: 2385536, 1: 2386901, 2: 2387100, 12: 2387100, 23: 2387128, 34: 2387156, 45: 2387312, 52: 2387546, 56: 2387574, 19211: 2419715, 19214: 2428675, 19216: 24
[2024-06-25 17:57:07] 2024-06-25 21:56:42,461 | INFO     | --------------------------------------------------
[2024-06-25 17:57:07] 2024-06-25 21:56:42,461 | INFO     | 
[2024-06-25 17:57:07] 2024-06-25 21:56:42,461 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | job 6243996991 has completed (purged errors)
[2024-06-25 17:57:07] 2024-06-25 21:56:42,713 | INFO     | overall cleanup function is called
[2024-06-25 17:57:07] 2024-06-25 21:56:43,731 | INFO     | --- collectZombieJob: --- 10, [97050]
[2024-06-25 17:57:07] 2024-06-25 21:56:43,732 | INFO     | zombie collector waiting for pid 97050
[2024-06-25 17:57:07] 2024-06-25 21:56:43,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 17:57:07] 2024-06-25 21:56:44,737 | INFO     | collected zombie processes
[2024-06-25 17:57:07] 2024-06-25 21:56:44,737 | INFO     | will now attempt to kill all subprocesses of pid=97050
[2024-06-25 17:57:07] 2024-06-25 21:56:44,960 | INFO     | process IDs to be killed: [97050] (in reverse order)
[2024-06-25 17:57:07] 2024-06-25 21:56:45,341 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 17:57:07] 2024-06-25 21:56:45,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 17:57:07] 2024-06-25 21:56:45,364 | INFO     | did not find any defunct processes belonging to 97050
[2024-06-25 17:57:07] 2024-06-25 21:56:45,386 | INFO     | did not find any defunct processes belonging to 97050
[2024-06-25 17:57:07] 2024-06-25 21:56:45,387 | INFO     | ready for new job
[2024-06-25 17:57:07] 2024-06-25 21:56:45,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 17:57:07] 2024-06-25 21:56:45,388 | INFO     | *************************************
[2024-06-25 17:57:07] 2024-06-25 21:56:45,388 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 17:57:07] 2024-06-25 21:56:45,388 | INFO     | *************************************
[2024-06-25 17:57:07] 2024-06-25 21:56:45,389 | INFO     | 
[2024-06-25 17:57:07] 2024-06-25 21:56:45,401 | INFO     | architecture information:
[2024-06-25 17:57:07] 2024-06-25 21:56:45,409 | INFO     | executing command: cat /etc/os-release
[2024-06-25 17:57:07] 2024-06-25 21:56:45,556 | INFO     | cat /etc/os-release:
[2024-06-25 17:57:07] NAME="CentOS Linux"
[2024-06-25 17:57:07] VERSION="7 (Core)"
[2024-06-25 17:57:07] ID="centos"
[2024-06-25 17:57:07] ID_LIKE="rhel fedora"
[2024-06-25 17:57:07] VERSION_ID="7"
[2024-06-25 17:57:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 17:57:07] ANSI_COLOR="0;31"
[2024-06-25 17:57:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 17:57:07] HOME_URL="https://www.centos.org/"
[2024-06-25 17:57:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 17:57:07] 
[2024-06-25 17:57:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 17:57:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 17:57:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 17:57:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 17:57:07] 
[2024-06-25 17:57:07] 2024-06-25 21:56:45,556 | INFO     | *************************************
[2024-06-25 17:57:07] 2024-06-25 21:56:46,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-25 17:57:07] 2024-06-25 21:56:46,195 | INFO     | sufficient remaining disk space (101500059648 B)
[2024-06-25 17:57:07] 2024-06-25 21:56:46,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 17:57:07] 2024-06-25 21:56:46,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 17:57:07] 2024-06-25 21:56:46,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 17:57:07] 2024-06-25 21:56:46,199 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-25 17:57:07] 2024-06-25 21:56:46,200 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 17:57:07] 2024-06-25 21:56:46,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 17:57:07] 2024-06-25 21:56:46,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 17:57:07] 2024-06-25 21:56:46,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:57:07] 2024-06-25 21:56:46,200 | INFO     | aborting loop
[2024-06-25 17:57:07] 2024-06-25 21:56:46,357 | INFO     | all job control threads have been joined
[2024-06-25 17:57:07] 2024-06-25 21:56:46,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 17:57:07] 2024-06-25 21:56:46,907 | INFO     | all data control threads have been joined
[2024-06-25 17:57:07] 2024-06-25 21:56:47,201 | INFO     | [job] retrieve thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,205 | INFO     | [job] job monitor thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,279 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,297 | INFO     | all payload control threads have been joined
[2024-06-25 17:57:07] 2024-06-25 21:56:47,363 | INFO     | [job] control thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,376 | INFO     | [payload] validate_post thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,421 | INFO     | [data] copytool_in thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,425 | INFO     | [payload] failed_post thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:57:07] 2024-06-25 21:56:47,738 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,913 | INFO     | [data] control thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:47,984 | INFO     | [job] validate thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:48,002 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:48,204 | INFO     | [data] copytool_out thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:48,303 | INFO     | [payload] control thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:48,486 | INFO     | [job] queue monitor thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:50,729 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:56,503 | INFO     | job.realtimelogging is not enabled
[2024-06-25 17:57:07] 2024-06-25 21:56:57,509 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 17:57:07] 2024-06-25 21:56:59,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984682215232)>', '<ExcThread(monitor, started 139984233285376)>']
[2024-06-25 17:57:07] 2024-06-25 21:57:00,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 17:57:07] 2024-06-25 21:57:00,287 | INFO     | [monitor] control thread has ended
[2024-06-25 17:57:07] 2024-06-25 21:57:04,316 | INFO     | all workflow threads have been joined
[2024-06-25 17:57:07] 2024-06-25 21:57:04,316 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 17:57:07] 2024-06-25 21:57:04,317 | INFO     | traces error code: 0
[2024-06-25 17:57:07] 2024-06-25 21:57:04,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 17:57:07] 2024-06-25 21:57:04,739 [wrapper] ==== pilot stdout END ====
[2024-06-25 17:57:07] 2024-06-25 21:57:04,775 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 17:57:07] 2024-06-25 21:57:04,811 [wrapper] pilotpid: 53985
[2024-06-25 17:57:07] 2024-06-25 21:57:04,843 [wrapper] Pilot exit status: 0
[2024-06-25 17:57:07] 2024-06-25 21:57:04,978 [wrapper] pandaids: 6243996991
[2024-06-25 17:57:07] 2024-06-25 21:57:05,165 [wrapper] cleanup supervisor_pilot 56980 53986
[2024-06-25 17:57:07] 2024-06-25 21:57:05,172 [wrapper] Test setup, not cleaning
[2024-06-25 17:57:07] 2024-06-25 21:57:05,214 [wrapper] ==== wrapper stdout END ====
[2024-06-25 17:57:07] 2024-06-25 21:57:05,229 [wrapper] ==== wrapper stderr END ====
[2024-06-25 17:57:07] 2024-06-25 21:57:05,236 [wrapper] apfmon messages muted
[2024-06-25 17:57:07]  *** Error codes and diagnostics ***
[2024-06-25 17:57:07]     "exeErrorCode": 0,
[2024-06-25 17:57:07]     "exeErrorDiag": "",
[2024-06-25 17:57:07]     "pilotErrorCode": 0,
[2024-06-25 17:57:07]     "pilotErrorDiag": "",
[2024-06-25 17:57:07]  *** Listing of results directory ***
[2024-06-25 17:57:07] total 879128
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas    469766 Jun 25 12:25 pilot3.tar.gz
[2024-06-25 17:57:07] -rwx------ 1 boincer umatlas     32220 Jun 25 12:30 runpilot2-wrapper.sh
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas      5654 Jun 25 12:30 queuedata.json
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas       100 Jun 25 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 17:57:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun 25 12:31 run_atlas
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas       105 Jun 25 12:31 job.xml
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas    482516 Jun 25 12:31 input.tar.gz
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas 617456802 Jun 25 12:31 EVNT.38776140._000968.pool.root.1
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 12:31 start_atlas.sh
[2024-06-25 17:57:07] drwxrwx--x 2 boincer umatlas      4096 Jun 25 12:31 shared
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas         0 Jun 25 12:31 boinc_lockfile
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas      2616 Jun 25 12:31 pandaJob.out
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas       467 Jun 25 12:32 setup.sh.local
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas   1033810 Jun 25 12:33 agis_schedconf.cvmfs.json
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas   1321363 Jun 25 12:33 cric_ddmendpoints.json
[2024-06-25 17:57:07] drwx------ 4 boincer umatlas      4096 Jun 25 12:33 pilot3
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas      6388 Jun 25 17:46 init_data.xml
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas 274856490 Jun 25 17:54 HITS.38776146._072963.pool.root.1
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas       531 Jun 25 17:55 boinc_task_state.xml
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas      1088 Jun 25 17:55 memory_monitor_summary.json
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas         0 Jun 25 17:55 agis_ddmendpoints.agis.ALL.json
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas    452369 Jun 25 17:55 log.38776146._072963.job.log.tgz.1
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas        95 Jun 25 17:56 pilot_heartbeat.json
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas      7763 Jun 25 17:56 heartbeat.json
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas      8192 Jun 25 17:56 boinc_mmap_file
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas        28 Jun 25 17:56 wrapper_checkpoint.txt
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas      4407 Jun 25 17:57 pilotlog.txt
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas   1731817 Jun 25 17:57 log.38776146._072963.job.log.1
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas       357 Jun 25 17:57 output.list
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas       620 Jun 25 17:57 runtime_log
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas   2201600 Jun 25 17:57 result.tar.gz
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas       651 Jun 25 17:57 WXxLDmnEOg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmgRoKDmeAdy5n.diag
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas     11400 Jun 25 17:57 runtime_log.err
[2024-06-25 17:57:07] -rw-r--r-- 1 boincer umatlas     21719 Jun 25 17:57 stderr.txt
[2024-06-25 17:57:07] HITS file was successfully produced:
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas 274856490 Jun 25 17:54 shared/HITS.pool.root.1
[2024-06-25 17:57:07]  *** Contents of shared directory: ***
[2024-06-25 17:57:07] total 874056
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas    482516 Jun 25 12:31 input.tar.gz
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas 617456802 Jun 25 12:31 ATLAS.root_0
[2024-06-25 17:57:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 12:31 start_atlas.sh
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas 274856490 Jun 25 17:54 HITS.pool.root.1
[2024-06-25 17:57:07] -rw------- 1 boincer umatlas   2201600 Jun 25 17:57 result.tar.gz
17:57:08 (33156): run_atlas exited; CPU time 54907.939257
17:57:08 (33156): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN