Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:35 (20666): wrapper (7.7.26015): starting
04:09:35 (20666): wrapper: running run_atlas (--nthreads 8)
[2024-06-25 04:09:35] Arguments: --nthreads 8
[2024-06-25 04:09:35] Threads: 8
[2024-06-25 04:09:35] Checking for CVMFS
[2024-06-25 04:09:35] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-25 04:09:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-25 04:09:35] Running cvmfs_config stat atlas.cern.ch
[2024-06-25 04:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-25 04:09:36] 2.11.2.0 46690 50764 91944 134266 1 25 16922025 18432001 6191 130560 2 113686507 98.628 336716200 33196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-06-25 04:09:36] CVMFS is ok
[2024-06-25 04:09:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 04:09:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 04:09:36] Further information can be found at the LHC@home message board.
[2024-06-25 04:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 04:09:36] Checking for apptainer binary...
[2024-06-25 04:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-25 04:09:36] Running /usr/bin/apptainer --version
[2024-06-25 04:09:37] apptainer version 1.3.1-1.el7
[2024-06-25 04:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 04:09:47] c-9-34.aglt2.org
[2024-06-25 04:09:47] apptainer works
[2024-06-25 04:09:47] Set ATHENA_PROC_NUMBER=8
[2024-06-25 04:09:47] Set ATHENA_CORE_NUMBER=8
[2024-06-25 04:09:47] Starting ATLAS job with PandaID=6243527446
[2024-06-25 04:09:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 17:44:34]  *** The last 200 lines of the pilot log: ***
[2024-06-25 17:44:34] 2024-06-25 21:44:17,777 | INFO     | current chi2=7.8231353890934345 (change=9.169455905676225 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,777 | INFO     | right removable region: 790
[2024-06-25 17:44:34] 2024-06-25 21:44:17,778 | INFO     | model: linear, x: [1719303596.0, 1719303657.0, 1719303718.0, 1719303779.0, 1719303840.0, 1719303901.0, 1719303962.0, 1719304023.0, 1719304084.0, 1719304145.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,779 | INFO     | sum of square deviations: 153458487368.7944
[2024-06-25 17:44:34] 2024-06-25 21:44:17,796 | INFO     | sum of deviations: 701895489686.3403
[2024-06-25 17:44:34] 2024-06-25 21:44:17,796 | INFO     | mean x: 1719327691.4652338
[2024-06-25 17:44:34] 2024-06-25 21:44:17,796 | INFO     | mean y: 2497685.5941845765
[2024-06-25 17:44:34] 2024-06-25 21:44:17,797 | INFO     | -- intersect: -7861442410.674966
[2024-06-25 17:44:34] 2024-06-25 21:44:17,797 | INFO     | intersect: -7861442410.674966
[2024-06-25 17:44:34] 2024-06-25 21:44:17,798 | INFO     | chi2: 4.591028194320181
[2024-06-25 17:44:34] 2024-06-25 21:44:17,798 | INFO     | current chi2=4.591028194320181 (change=46.695849157379016 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,799 | INFO     | model: linear, x: [1719303901.0, 1719303962.0, 1719304023.0, 1719304084.0, 1719304145.0, 1719304206.0, 1719304268.0, 1719304328.0, 1719304390.0, 1719304450.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,799 | INFO     | sum of square deviations: 150566534860.20474
[2024-06-25 17:44:34] 2024-06-25 21:44:17,817 | INFO     | sum of deviations: 531382248064.91174
[2024-06-25 17:44:34] 2024-06-25 21:44:17,817 | INFO     | mean x: 1719327843.9681933
[2024-06-25 17:44:34] 2024-06-25 21:44:17,817 | INFO     | mean y: 2506675.796437659
[2024-06-25 17:44:34] 2024-06-25 21:44:17,817 | INFO     | -- intersect: -6065377504.022656
[2024-06-25 17:44:34] 2024-06-25 21:44:17,818 | INFO     | intersect: -6065377504.022656
[2024-06-25 17:44:34] 2024-06-25 21:44:17,819 | INFO     | chi2: 3.0186781190690914
[2024-06-25 17:44:34] 2024-06-25 21:44:17,819 | INFO     | current chi2=3.0186781190690914 (change=34.24832104486599 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,820 | INFO     | model: linear, x: [1719304206.0, 1719304268.0, 1719304328.0, 1719304390.0, 1719304450.0, 1719304513.0, 1719304572.0, 1719304633.0, 1719304695.0, 1719304757.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,820 | INFO     | sum of square deviations: 147711141176.60205
[2024-06-25 17:44:34] 2024-06-25 21:44:17,836 | INFO     | sum of deviations: 381775939708.53876
[2024-06-25 17:44:34] 2024-06-25 21:44:17,836 | INFO     | mean x: 1719327996.4711907
[2024-06-25 17:44:34] 2024-06-25 21:44:17,836 | INFO     | mean y: 2514665.9795134445
[2024-06-25 17:44:34] 2024-06-25 21:44:17,836 | INFO     | -- intersect: -4441280543.314853
[2024-06-25 17:44:34] 2024-06-25 21:44:17,837 | INFO     | intersect: -4441280543.314853
[2024-06-25 17:44:34] 2024-06-25 21:44:17,838 | INFO     | chi2: 1.8249449793804589
[2024-06-25 17:44:34] 2024-06-25 21:44:17,838 | INFO     | current chi2=1.8249449793804589 (change=39.5448965607754 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,839 | INFO     | model: linear, x: [1719304513.0, 1719304572.0, 1719304633.0, 1719304695.0, 1719304757.0, 1719304816.0, 1719304877.0, 1719304938.0, 1719304999.0, 1719305062.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,839 | INFO     | sum of square deviations: 144892169037.3763
[2024-06-25 17:44:34] 2024-06-25 21:44:17,854 | INFO     | sum of deviations: 265526559198.4074
[2024-06-25 17:44:34] 2024-06-25 21:44:17,855 | INFO     | mean x: 1719328148.9716494
[2024-06-25 17:44:34] 2024-06-25 21:44:17,855 | INFO     | mean y: 2520948.7912371135
[2024-06-25 17:44:34] 2024-06-25 21:44:17,855 | INFO     | -- intersect: -3148286238.1150713
[2024-06-25 17:44:34] 2024-06-25 21:44:17,855 | INFO     | intersect: -3148286238.1150713
[2024-06-25 17:44:34] 2024-06-25 21:44:17,856 | INFO     | chi2: 1.0549565592167776
[2024-06-25 17:44:34] 2024-06-25 21:44:17,856 | INFO     | current chi2=1.0549565592167776 (change=42.19241833937814 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,857 | INFO     | model: linear, x: [1719304816.0, 1719304877.0, 1719304938.0, 1719304999.0, 1719305062.0, 1719305121.0, 1719305182.0, 1719305244.0, 1719305304.0, 1719305365.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,858 | INFO     | sum of square deviations: 142109432479.97156
[2024-06-25 17:44:34] 2024-06-25 21:44:17,873 | INFO     | sum of deviations: 211370762954.69156
[2024-06-25 17:44:34] 2024-06-25 21:44:17,873 | INFO     | mean x: 1719328301.468223
[2024-06-25 17:44:34] 2024-06-25 21:44:17,874 | INFO     | mean y: 2523914.701686122
[2024-06-25 17:44:34] 2024-06-25 21:44:17,874 | INFO     | -- intersect: -2554771041.0863533
[2024-06-25 17:44:34] 2024-06-25 21:44:17,874 | INFO     | intersect: -2554771041.0863533
[2024-06-25 17:44:34] 2024-06-25 21:44:17,875 | INFO     | chi2: 0.9088729363803356
[2024-06-25 17:44:34] 2024-06-25 21:44:17,875 | INFO     | current chi2=0.9088729363803356 (change=13.847359074661572 %)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,875 | INFO     | left removable region: 50
[2024-06-25 17:44:34] 2024-06-25 21:44:17,876 | INFO     | model: linear, x: [1719306341.0, 1719306405.0, 1719306463.0, 1719306526.0, 1719306585.0, 1719306646.0, 1719306707.0, 1719306769.0, 1719306830.0, 1719306891.0, 1719
[2024-06-25 17:44:34] 2024-06-25 21:44:17,877 | INFO     | sum of square deviations: 125647391683.22148
[2024-06-25 17:44:34] 2024-06-25 21:44:17,890 | INFO     | sum of deviations: 179234370072.5839
[2024-06-25 17:44:34] 2024-06-25 21:44:17,891 | INFO     | mean x: 1719328880.9675677
[2024-06-25 17:44:34] 2024-06-25 21:44:17,891 | INFO     | mean y: 2531310.5243243244
[2024-06-25 17:44:34] 2024-06-25 21:44:17,891 | INFO     | -- intersect: -2450068976.6726727
[2024-06-25 17:44:34] 2024-06-25 21:44:17,891 | INFO     | intersect: -2450068976.6726727
[2024-06-25 17:44:34] 2024-06-25 21:44:17,892 | INFO     | chi2: 0.03480056825609766
[2024-06-25 17:44:34] 2024-06-25 21:44:17,892 | INFO     | -- intersect: -2450068976.6726727
[2024-06-25 17:44:34] 2024-06-25 21:44:17,892 | INFO     | current memory leak: 1.43 B/s (using 740 data points, chi2=0.03)
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | ..............................
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . Timing measurements:
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . get job = 0 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . initial setup = 7 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . payload setup = 66 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . stage-in = 0 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,894 | INFO     | . payload execution = 48595 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,895 | INFO     | . stage-out = 2 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,895 | INFO     | . log creation = 0 s
[2024-06-25 17:44:34] 2024-06-25 21:44:17,895 | INFO     | ..............................
[2024-06-25 17:44:34] 2024-06-25 21:44:18,031 | WARNING  | process 20529 is no longer using CPU - aborting
[2024-06-25 17:44:34] 2024-06-25 21:44:18,031 | INFO     | aborting job monitoring since job object (job id=6243527446) has expired
[2024-06-25 17:44:34] 2024-06-25 21:44:18,037 | INFO     | 
[2024-06-25 17:44:34] 2024-06-25 21:44:18,037 | INFO     | job summary report
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | --------------------------------------------------
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | PanDA job id: 6243527446
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | task id: 40024031
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | errors: (none)
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | pilot state: finished 
[2024-06-25 17:44:34] 2024-06-25 21:44:18,038 | INFO     | transexitcode: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | exeerrorcode: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | exeerrordiag: 
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | exitcode: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | exitmsg: OK
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | cpuconsumptiontime: 121091 s
[2024-06-25 17:44:34] 2024-06-25 21:44:18,039 | INFO     | nevents: 400
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | neventsw: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | pid: 20529
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | pgrp: 20529
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | corecount: 8
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | event service: False
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | sizes: {0: 2386012, 1: 2386776, 2: 2386975, 13: 2386975, 24: 2387031, 35: 2387059, 40: 2387421, 45: 2387449, 48665: 2432603, 48666: 2432602, 48668: 2441618, 48669:
[2024-06-25 17:44:34] 2024-06-25 21:44:18,040 | INFO     | --------------------------------------------------
[2024-06-25 17:44:34] 2024-06-25 21:44:18,041 | INFO     | 
[2024-06-25 17:44:34] 2024-06-25 21:44:18,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-25 17:44:34] 2024-06-25 21:44:18,299 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,300 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,300 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,300 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | job 6243527446 has completed (purged errors)
[2024-06-25 17:44:34] 2024-06-25 21:44:18,303 | INFO     | overall cleanup function is called
[2024-06-25 17:44:34] 2024-06-25 21:44:19,312 | INFO     | --- collectZombieJob: --- 10, [20529]
[2024-06-25 17:44:34] 2024-06-25 21:44:19,312 | INFO     | zombie collector waiting for pid 20529
[2024-06-25 17:44:34] 2024-06-25 21:44:19,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 17:44:34] 2024-06-25 21:44:20,318 | INFO     | collected zombie processes
[2024-06-25 17:44:34] 2024-06-25 21:44:20,318 | INFO     | will now attempt to kill all subprocesses of pid=20529
[2024-06-25 17:44:34] 2024-06-25 21:44:20,522 | INFO     | process IDs to be killed: [20529] (in reverse order)
[2024-06-25 17:44:34] 2024-06-25 21:44:20,920 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 17:44:34] 2024-06-25 21:44:20,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 17:44:34] 2024-06-25 21:44:20,931 | INFO     | did not find any defunct processes belonging to 20529
[2024-06-25 17:44:34] 2024-06-25 21:44:20,944 | INFO     | did not find any defunct processes belonging to 20529
[2024-06-25 17:44:34] 2024-06-25 21:44:20,945 | INFO     | ready for new job
[2024-06-25 17:44:34] 2024-06-25 21:44:20,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 17:44:34] 2024-06-25 21:44:20,948 | INFO     | *************************************
[2024-06-25 17:44:34] 2024-06-25 21:44:20,949 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 17:44:34] 2024-06-25 21:44:20,949 | INFO     | *************************************
[2024-06-25 17:44:34] 2024-06-25 21:44:20,949 | INFO     | 
[2024-06-25 17:44:34] 2024-06-25 21:44:20,951 | INFO     | architecture information:
[2024-06-25 17:44:34] 2024-06-25 21:44:20,959 | INFO     | executing command: cat /etc/os-release
[2024-06-25 17:44:34] 2024-06-25 21:44:20,987 | INFO     | cat /etc/os-release:
[2024-06-25 17:44:34] NAME="CentOS Linux"
[2024-06-25 17:44:34] VERSION="7 (Core)"
[2024-06-25 17:44:34] ID="centos"
[2024-06-25 17:44:34] ID_LIKE="rhel fedora"
[2024-06-25 17:44:34] VERSION_ID="7"
[2024-06-25 17:44:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 17:44:34] ANSI_COLOR="0;31"
[2024-06-25 17:44:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 17:44:34] HOME_URL="https://www.centos.org/"
[2024-06-25 17:44:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 17:44:34] 
[2024-06-25 17:44:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 17:44:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 17:44:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 17:44:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 17:44:34] 
[2024-06-25 17:44:34] 2024-06-25 21:44:20,987 | INFO     | *************************************
[2024-06-25 17:44:34] 2024-06-25 21:44:21,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-25 17:44:34] 2024-06-25 21:44:21,605 | INFO     | sufficient remaining disk space (104480112640 B)
[2024-06-25 17:44:34] 2024-06-25 21:44:21,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 17:44:34] 2024-06-25 21:44:21,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 17:44:34] 2024-06-25 21:44:21,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:44:34] 2024-06-25 21:44:21,607 | INFO     | aborting loop
[2024-06-25 17:44:34] 2024-06-25 21:44:21,749 | INFO     | all data control threads have been joined
[2024-06-25 17:44:34] 2024-06-25 21:44:22,108 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 17:44:34] 2024-06-25 21:44:22,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 17:44:34] 2024-06-25 21:44:22,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 17:44:34] 2024-06-25 21:44:22,227 | INFO     | all payload control threads have been joined
[2024-06-25 17:44:34] 2024-06-25 21:44:22,613 | INFO     | [job] retrieve thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:22,614 | INFO     | [job] job monitor thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:22,756 | INFO     | [data] control thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:22,769 | INFO     | [payload] failed_post thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:22,779 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:22,906 | INFO     | all job control threads have been joined
[2024-06-25 17:44:34] 2024-06-25 21:44:23,046 | INFO     | [job] validate thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:44:34] 2024-06-25 21:44:23,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 17:44:34] 2024-06-25 21:44:23,233 | INFO     | [payload] control thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,262 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,281 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,476 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,590 | INFO     | [data] copytool_in thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,871 | INFO     | [payload] validate_post thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,912 | INFO     | [job] control thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:23,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 17:44:34] 2024-06-25 21:44:24,056 | INFO     | [job] queue monitor thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:25,081 | INFO     | [data] copytool_out thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:27,928 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 17:44:34] 2024-06-25 21:44:28,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328021948224)>', '<ExcThread(monitor, started 140327444801280)>']
[2024-06-25 17:44:34] 2024-06-25 21:44:29,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 17:44:34] 2024-06-25 21:44:29,147 | INFO     | [monitor] control thread has ended
[2024-06-25 17:44:34] 2024-06-25 21:44:33,932 | INFO     | all workflow threads have been joined
[2024-06-25 17:44:34] 2024-06-25 21:44:33,932 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 17:44:34] 2024-06-25 21:44:33,932 | INFO     | traces error code: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:33,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 17:44:34] 2024-06-25 21:44:34,112 [wrapper] ==== pilot stdout END ====
[2024-06-25 17:44:34] 2024-06-25 21:44:34,131 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 17:44:34] 2024-06-25 21:44:34,134 [wrapper] pilotpid: 39485
[2024-06-25 17:44:34] 2024-06-25 21:44:34,137 [wrapper] Pilot exit status: 0
[2024-06-25 17:44:34] 2024-06-25 21:44:34,181 [wrapper] pandaids: 6243527446
[2024-06-25 17:44:34] 2024-06-25 21:44:34,240 [wrapper] cleanup supervisor_pilot 27292 39486
[2024-06-25 17:44:34] 2024-06-25 21:44:34,249 [wrapper] Test setup, not cleaning
[2024-06-25 17:44:34] 2024-06-25 21:44:34,252 [wrapper] ==== wrapper stdout END ====
[2024-06-25 17:44:34] 2024-06-25 21:44:34,255 [wrapper] ==== wrapper stderr END ====
[2024-06-25 17:44:34] 2024-06-25 21:44:34,260 [wrapper] apfmon messages muted
[2024-06-25 17:44:34]  *** Error codes and diagnostics ***
[2024-06-25 17:44:34]     "exeErrorCode": 0,
[2024-06-25 17:44:34]     "exeErrorDiag": "",
[2024-06-25 17:44:34]     "pilotErrorCode": 0,
[2024-06-25 17:44:34]     "pilotErrorDiag": "",
[2024-06-25 17:44:34]  *** Listing of results directory ***
[2024-06-25 17:44:34] total 847240
[2024-06-25 17:44:34] -rwx------ 1 boincer umatlas     32220 Jun 25 04:08 runpilot2-wrapper.sh
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas      5654 Jun 25 04:08 queuedata.json
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas    469766 Jun 25 04:08 pilot3.tar.gz
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas       100 Jun 25 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 17:44:34] -rwxr-xr-x 1 boincer umatlas      7986 Jun 25 04:09 run_atlas
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas       105 Jun 25 04:09 job.xml
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas 595510003 Jun 25 04:09 EVNT.40024029._000048.pool.root.1
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 04:09 start_atlas.sh
[2024-06-25 17:44:34] drwxrwx--x 2 boincer umatlas      4096 Jun 25 04:09 shared
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas    482513 Jun 25 04:09 input.tar.gz
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas         0 Jun 25 04:09 boinc_lockfile
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas      2572 Jun 25 04:09 pandaJob.out
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas       424 Jun 25 04:09 setup.sh.local
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas   1021013 Jun 25 04:11 agis_schedconf.cvmfs.json
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas   1321363 Jun 25 04:11 cric_ddmendpoints.json
[2024-06-25 17:44:34] drwx------ 4 boincer umatlas      4096 Jun 25 04:11 pilot3
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas      5949 Jun 25 17:37 init_data.xml
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas 254889213 Jun 25 17:42 HITS.40024031._001903.pool.root.1
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas       533 Jun 25 17:43 boinc_task_state.xml
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas        95 Jun 25 17:43 pilot_heartbeat.json
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas      1066 Jun 25 17:43 memory_monitor_summary.json
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas         0 Jun 25 17:43 agis_ddmendpoints.agis.ALL.json
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas    780715 Jun 25 17:43 log.40024031._001903.job.log.tgz.1
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas      7769 Jun 25 17:44 heartbeat.json
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas      8192 Jun 25 17:44 boinc_mmap_file
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas        29 Jun 25 17:44 wrapper_checkpoint.txt
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas      4212 Jun 25 17:44 pilotlog.txt
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas   6039119 Jun 25 17:44 log.40024031._001903.job.log.1
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas       357 Jun 25 17:44 output.list
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas       620 Jun 25 17:44 runtime_log
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas   6840320 Jun 25 17:44 result.tar.gz
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas     10990 Jun 25 17:44 runtime_log.err
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas       652 Jun 25 17:44 ocgNDmAPGg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmiPoKDmedtxGn.diag
[2024-06-25 17:44:34] -rw-r--r-- 1 boincer umatlas     21708 Jun 25 17:44 stderr.txt
[2024-06-25 17:44:34] HITS file was successfully produced:
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas 254889213 Jun 25 17:42 shared/HITS.pool.root.1
[2024-06-25 17:44:34]  *** Contents of shared directory: ***
[2024-06-25 17:44:34] total 837652
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas 595510003 Jun 25 04:09 ATLAS.root_0
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 04:09 start_atlas.sh
[2024-06-25 17:44:34] -rw-r--r-- 2 boincer umatlas    482513 Jun 25 04:09 input.tar.gz
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas 254889213 Jun 25 17:42 HITS.pool.root.1
[2024-06-25 17:44:34] -rw------- 1 boincer umatlas   6840320 Jun 25 17:44 result.tar.gz
17:44:36 (20666): run_atlas exited; CPU time 120116.268286
17:44:36 (20666): called boinc_finish(0)

</stderr_txt>
]]>

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