Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:19 (64436): wrapper (7.7.26015): starting
01:56:19 (64436): wrapper: running run_atlas (--nthreads 8)
[2024-06-25 01:56:19] Arguments: --nthreads 8
[2024-06-25 01:56:19] Threads: 8
[2024-06-25 01:56:19] Checking for CVMFS
[2024-06-25 01:56:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-25 01:56:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-25 01:56:19] Running cvmfs_config stat atlas.cern.ch
[2024-06-25 01:56:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-25 01:56:19] 2.11.2.0 95880 27933 153608 134263 3 102 17395584 18432001 15593 130560 0 11391993 99.322 11822820 59490 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-25 01:56:19] CVMFS is ok
[2024-06-25 01:56:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 01:56:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 01:56:19] Further information can be found at the LHC@home message board.
[2024-06-25 01:56:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 01:56:19] Checking for apptainer binary...
[2024-06-25 01:56:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-25 01:56:19] Running /usr/bin/apptainer --version
[2024-06-25 01:56:19] apptainer version 1.3.1-1.el7
[2024-06-25 01:56:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 01:56:20] c-212-9.aglt2.org
[2024-06-25 01:56:20] apptainer works
[2024-06-25 01:56:20] Set ATHENA_PROC_NUMBER=8
[2024-06-25 01:56:20] Set ATHENA_CORE_NUMBER=8
[2024-06-25 01:56:20] Starting ATLAS job with PandaID=6243438363
[2024-06-25 01:56:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 04:38:05]  *** The last 200 lines of the pilot log: ***
[2024-06-25 04:38:05] 2024-06-25 08:37:43,943 | INFO     | chi2: 0.8859766557023335
[2024-06-25 04:38:05] 2024-06-25 08:37:43,943 | INFO     | current chi2=0.8859766557023335 (change=64.47712848660086 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,943 | INFO     | model: linear, x: [1719295932.0, 1719295993.0, 1719296054.0, 1719296115.0, 1719296176.0, 1719296237.0, 1719296298.0, 1719296359.0, 1719296420.0, 1719296481.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,943 | INFO     | sum of square deviations: 906705220.9930037
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | sum of deviations: 5998892774.37063
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | mean x: 1719300263.006993
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | mean y: 2535396.6293706293
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | -- intersect: -11372603607.677475
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | intersect: -11372603607.677475
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | chi2: 0.0248630733448238
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | current chi2=0.0248630733448238 (change=97.19371010682958 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,944 | INFO     | model: linear, x: [1719296237.0, 1719296298.0, 1719296359.0, 1719296420.0, 1719296481.0, 1719296542.0, 1719296603.0, 1719296664.0, 1719296725.0, 1719296786.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | sum of square deviations: 814879938.4927523
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | sum of deviations: 3059498405.275363
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | mean x: 1719300415.5072465
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | mean y: 2540211.724637681
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | -- intersect: -6452640031.3468075
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | intersect: -6452640031.3468075
[2024-06-25 04:38:05] 2024-06-25 08:37:43,945 | INFO     | chi2: 0.0015504624879740564
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | current chi2=0.0015504624879740564 (change=93.76399503604873 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | model: linear, x: [1719296542.0, 1719296603.0, 1719296664.0, 1719296725.0, 1719296786.0, 1719296847.0, 1719296908.0, 1719296969.0, 1719297030.0, 1719297091.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | sum of square deviations: 729473380.9924784
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | sum of deviations: 1986702368.225564
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | mean x: 1719300568.0075188
[2024-06-25 04:38:05] 2024-06-25 08:37:43,946 | INFO     | mean y: 2542119.77443609
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | -- intersect: -4679929645.685796
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | intersect: -4679929645.685796
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | chi2: 0.00030673201933439134
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | current chi2=0.00030673201933439134 (change=80.21674037820875 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | model: linear, x: [1719296847.0, 1719296908.0, 1719296969.0, 1719297030.0, 1719297091.0, 1719297152.0, 1719297213.0, 1719297274.0, 1719297335.0, 1719297396.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,947 | INFO     | sum of square deviations: 650252985.9921875
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | sum of deviations: 1519215013.3046875
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | mean x: 1719300720.5078125
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | mean y: 2543012.1953125
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | -- intersect: -4014335838.419327
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | intersect: -4014335838.419327
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | chi2: 8.841458717683378e-05
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | current chi2=8.841458717683378e-05 (change=71.17529908723142 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | model: linear, x: [1719297152.0, 1719297213.0, 1719297274.0, 1719297335.0, 1719297396.0, 1719297457.0, 1719297518.0, 1719297579.0, 1719297640.0, 1719297701.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,948 | INFO     | sum of square deviations: 576986190.9918702
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | sum of deviations: 1288184200.682927
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | mean x: 1719300873.00813
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | mean y: 2543492.3170731706
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | -- intersect: -3835982031.183095
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | intersect: -3835982031.183095
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | chi2: 7.885273609190182e-05
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | current chi2=7.885273609190182e-05 (change=10.814789041323863 %)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,949 | INFO     | left removable region: 70
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | model: linear, x: [1719299287.0, 1719299348.0, 1719299409.0, 1719299470.0, 1719299531.0, 1719299592.0, 1719299653.0, 1719299714.0, 1719299775.0, 1719299836.0, 1719
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | sum of square deviations: 170943320.4878044
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | sum of deviations: 504620142.31707317
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | mean x: 1719301757.512195
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | mean y: 2545226.6829268294
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | -- intersect: -5072787901.783444
[2024-06-25 04:38:05] 2024-06-25 08:37:43,950 | INFO     | intersect: -5072787901.783444
[2024-06-25 04:38:05] 2024-06-25 08:37:43,951 | INFO     | chi2: 4.5768206781962084e-05
[2024-06-25 04:38:05] 2024-06-25 08:37:43,951 | INFO     | -- intersect: -5072787901.783444
[2024-06-25 04:38:05] 2024-06-25 08:37:43,951 | INFO     | current memory leak: 2.95 B/s (using 82 data points, chi2=0.00)
[2024-06-25 04:38:05] 2024-06-25 08:37:43,951 | INFO     | ..............................
[2024-06-25 04:38:05] 2024-06-25 08:37:43,951 | INFO     | . Timing measurements:
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . get job = 0 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . initial setup = 1 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . payload setup = 5 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . stage-in = 0 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . payload execution = 9630 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . stage-out = 1 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | . log creation = 0 s
[2024-06-25 04:38:05] 2024-06-25 08:37:43,952 | INFO     | ..............................
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | 
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | job summary report
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | --------------------------------------------------
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | PanDA job id: 6243438363
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | task id: 40024031
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | errors: (none)
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 04:38:05] 2024-06-25 08:37:44,006 | INFO     | pilot state: finished 
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | transexitcode: 0
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | exeerrorcode: 0
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | exeerrordiag: 
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | exitcode: 0
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | exitmsg: OK
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | cpuconsumptiontime: 50586 s
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | nevents: 400
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | neventsw: 0
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | pid: 94413
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | pgrp: 94413
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | corecount: 8
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | event service: False
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | sizes: {0: 2386798, 1: 2386997, 5: 2387203, 11: 2387259, 9639: 2415630, 9641: 2424774, 9658: 2424888}
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | --------------------------------------------------
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | 
[2024-06-25 04:38:05] 2024-06-25 08:37:44,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-25 04:38:05] 2024-06-25 08:37:44,028 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,028 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | job 6243438363 has completed (purged errors)
[2024-06-25 04:38:05] 2024-06-25 08:37:44,030 | INFO     | overall cleanup function is called
[2024-06-25 04:38:05] 2024-06-25 08:37:45,038 | INFO     | --- collectZombieJob: --- 10, [94413]
[2024-06-25 04:38:05] 2024-06-25 08:37:45,039 | INFO     | zombie collector waiting for pid 94413
[2024-06-25 04:38:05] 2024-06-25 08:37:45,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 04:38:05] 2024-06-25 08:37:46,043 | INFO     | collected zombie processes
[2024-06-25 04:38:05] 2024-06-25 08:37:46,043 | INFO     | will now attempt to kill all subprocesses of pid=94413
[2024-06-25 04:38:05] 2024-06-25 08:37:46,231 | INFO     | process IDs to be killed: [94413] (in reverse order)
[2024-06-25 04:38:05] 2024-06-25 08:37:46,394 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 04:38:05] 2024-06-25 08:37:46,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 04:38:05] 2024-06-25 08:37:46,411 | INFO     | did not find any defunct processes belonging to 94413
[2024-06-25 04:38:05] 2024-06-25 08:37:46,429 | INFO     | did not find any defunct processes belonging to 94413
[2024-06-25 04:38:05] 2024-06-25 08:37:46,429 | INFO     | ready for new job
[2024-06-25 04:38:05] 2024-06-25 08:37:46,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 04:38:05] 2024-06-25 08:37:46,431 | INFO     | *************************************
[2024-06-25 04:38:05] 2024-06-25 08:37:46,431 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 04:38:05] 2024-06-25 08:37:46,431 | INFO     | *************************************
[2024-06-25 04:38:05] 2024-06-25 08:37:46,431 | INFO     | 
[2024-06-25 04:38:05] 2024-06-25 08:37:46,435 | INFO     | architecture information:
[2024-06-25 04:38:05] 2024-06-25 08:37:46,438 | INFO     | executing command: cat /etc/os-release
[2024-06-25 04:38:05] 2024-06-25 08:37:46,455 | INFO     | cat /etc/os-release:
[2024-06-25 04:38:05] NAME="CentOS Linux"
[2024-06-25 04:38:05] VERSION="7 (Core)"
[2024-06-25 04:38:05] ID="centos"
[2024-06-25 04:38:05] ID_LIKE="rhel fedora"
[2024-06-25 04:38:05] VERSION_ID="7"
[2024-06-25 04:38:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 04:38:05] ANSI_COLOR="0;31"
[2024-06-25 04:38:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 04:38:05] HOME_URL="https://www.centos.org/"
[2024-06-25 04:38:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 04:38:05] 
[2024-06-25 04:38:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 04:38:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 04:38:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 04:38:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 04:38:05] 
[2024-06-25 04:38:05] 2024-06-25 08:37:46,455 | INFO     | *************************************
[2024-06-25 04:38:05] 2024-06-25 08:37:46,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-25 04:38:05] 2024-06-25 08:37:46,999 | INFO     | sufficient remaining disk space (103495499776 B)
[2024-06-25 04:38:05] 2024-06-25 08:37:47,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 04:38:05] 2024-06-25 08:37:47,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 04:38:05] 2024-06-25 08:37:47,000 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-25 04:38:05] 2024-06-25 08:37:47,000 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 04:38:05] 2024-06-25 08:37:47,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 04:38:05] 2024-06-25 08:37:47,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 04:38:05] 2024-06-25 08:37:47,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 04:38:05] 2024-06-25 08:37:47,092 | INFO     | all payload control threads have been joined
[2024-06-25 04:38:05] 2024-06-25 08:37:47,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 04:38:05] 2024-06-25 08:37:47,665 | INFO     | aborting loop
[2024-06-25 04:38:05] 2024-06-25 08:37:47,675 | INFO     | all data control threads have been joined
[2024-06-25 04:38:05] 2024-06-25 08:37:47,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 04:38:05] 2024-06-25 08:37:48,005 | INFO     | [job] validate thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,007 | INFO     | [job] retrieve thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,043 | INFO     | [payload] failed_post thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,098 | INFO     | [payload] control thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,391 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,442 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,660 | INFO     | [payload] validate_post thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,665 | INFO     | all job control threads have been joined
[2024-06-25 04:38:05] 2024-06-25 08:37:48,670 | INFO     | [job] job monitor thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,681 | INFO     | [data] control thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,688 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:48,909 | INFO     | [data] copytool_in thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:49,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 04:38:05] 2024-06-25 08:37:49,671 | INFO     | [job] control thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:49,900 | INFO     | [data] copytool_out thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:50,024 | INFO     | [job] queue monitor thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:51,009 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:57,102 | INFO     | job.realtimelogging is not enabled
[2024-06-25 04:38:05] 2024-06-25 08:37:58,108 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 04:38:05] 2024-06-25 08:37:58,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481300916032)>', '<ExcThread(monitor, started 140480721446656)>']
[2024-06-25 04:38:05] 2024-06-25 08:37:59,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 04:38:05] 2024-06-25 08:37:59,075 | INFO     | [monitor] control thread has ended
[2024-06-25 04:38:05] 2024-06-25 08:38:03,545 | INFO     | all workflow threads have been joined
[2024-06-25 04:38:05] 2024-06-25 08:38:03,545 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 04:38:05] 2024-06-25 08:38:03,545 | INFO     | traces error code: 0
[2024-06-25 04:38:05] 2024-06-25 08:38:03,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 04:38:05] 2024-06-25 08:38:03,752 [wrapper] ==== pilot stdout END ====
[2024-06-25 04:38:05] 2024-06-25 08:38:03,788 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 04:38:05] 2024-06-25 08:38:03,829 [wrapper] pilotpid: 79302
[2024-06-25 04:38:05] 2024-06-25 08:38:03,850 [wrapper] Pilot exit status: 0
[2024-06-25 04:38:05] 2024-06-25 08:38:04,041 [wrapper] pandaids: 6243438363
[2024-06-25 04:38:05] 2024-06-25 08:38:04,412 [wrapper] cleanup supervisor_pilot 16302 79305
[2024-06-25 04:38:05] 2024-06-25 08:38:04,415 [wrapper] Test setup, not cleaning
[2024-06-25 04:38:05] 2024-06-25 08:38:04,458 [wrapper] ==== wrapper stdout END ====
[2024-06-25 04:38:05] 2024-06-25 08:38:04,501 [wrapper] ==== wrapper stderr END ====
[2024-06-25 04:38:05] 2024-06-25 08:38:04,583 [wrapper] apfmon messages muted
[2024-06-25 04:38:05]  *** Error codes and diagnostics ***
[2024-06-25 04:38:05]     "exeErrorCode": 0,
[2024-06-25 04:38:05]     "exeErrorDiag": "",
[2024-06-25 04:38:05]     "pilotErrorCode": 0,
[2024-06-25 04:38:05]     "pilotErrorDiag": "",
[2024-06-25 04:38:05]  *** Listing of results directory ***
[2024-06-25 04:38:05] total 838724
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas    469766 Jun 25 01:49 pilot3.tar.gz
[2024-06-25 04:38:05] -rwx------ 1 boincer umatlas     32220 Jun 25 01:54 runpilot2-wrapper.sh
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas      5654 Jun 25 01:54 queuedata.json
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas       100 Jun 25 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 04:38:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun 25 01:56 run_atlas
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas       105 Jun 25 01:56 job.xml
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas 596995085 Jun 25 01:56 EVNT.40024029._000032.pool.root.1
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 01:56 start_atlas.sh
[2024-06-25 04:38:05] drwxrwx--x 2 boincer umatlas      4096 Jun 25 01:56 shared
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas    482511 Jun 25 01:56 input.tar.gz
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas         0 Jun 25 01:56 boinc_lockfile
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas      2572 Jun 25 01:56 pandaJob.out
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas       424 Jun 25 01:56 setup.sh.local
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas   1020981 Jun 25 01:56 agis_schedconf.cvmfs.json
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas         0 Jun 25 01:56 agis_ddmendpoints.agis.ALL.json
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas   1321363 Jun 25 01:56 cric_ddmendpoints.json
[2024-06-25 04:38:05] drwx------ 4 boincer umatlas      4096 Jun 25 01:56 pilot3
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas      6302 Jun 25 04:36 init_data.xml
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas       531 Jun 25 04:36 boinc_task_state.xml
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas 255762232 Jun 25 04:36 HITS.40024031._001899.pool.root.1
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas        95 Jun 25 04:37 pilot_heartbeat.json
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas      1088 Jun 25 04:37 memory_monitor_summary.json
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas    351368 Jun 25 04:37 log.40024031._001899.job.log.tgz.1
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas      7750 Jun 25 04:37 heartbeat.json
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas      4407 Jun 25 04:38 pilotlog.txt
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas      8192 Jun 25 04:38 boinc_mmap_file
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas        27 Jun 25 04:38 wrapper_checkpoint.txt
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas    929944 Jun 25 04:38 log.40024031._001899.job.log.1
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas       357 Jun 25 04:38 output.list
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas       620 Jun 25 04:38 runtime_log
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas   1300480 Jun 25 04:38 result.tar.gz
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas     10994 Jun 25 04:38 runtime_log.err
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas       647 Jun 25 04:38 NIRODmdJEg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4OoKDmGywXDo.diag
[2024-06-25 04:38:05] -rw-r--r-- 1 boincer umatlas     21656 Jun 25 04:38 stderr.txt
[2024-06-25 04:38:05] HITS file was successfully produced:
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas 255762232 Jun 25 04:36 shared/HITS.pool.root.1
[2024-06-25 04:38:05]  *** Contents of shared directory: ***
[2024-06-25 04:38:05] total 834544
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas 596995085 Jun 25 01:56 ATLAS.root_0
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 25 01:56 start_atlas.sh
[2024-06-25 04:38:05] -rw-r--r-- 2 boincer umatlas    482511 Jun 25 01:56 input.tar.gz
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas 255762232 Jun 25 04:36 HITS.pool.root.1
[2024-06-25 04:38:05] -rw------- 1 boincer umatlas   1300480 Jun 25 04:38 result.tar.gz
04:38:07 (64436): run_atlas exited; CPU time 49650.060210
04:38:07 (64436): called boinc_finish(0)

</stderr_txt>
]]>

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