Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:22 (1550913): wrapper (7.7.26015): starting
05:45:22 (1550913): wrapper: running run_atlas (--nthreads 4)
[2024-06-25 05:45:22] Arguments: --nthreads 4
[2024-06-25 05:45:22] Threads: 4
[2024-06-25 05:45:22] Checking for CVMFS
[2024-06-25 05:45:22] No cvmfs_config command found, will try listing directly
[2024-06-25 05:45:22] CVMFS is ok
[2024-06-25 05:45:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 05:45:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 05:45:22] Further information can be found at the LHC@home message board.
[2024-06-25 05:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 05:45:22] Checking for apptainer binary...
[2024-06-25 05:45:22] which: no apptainer in ((null))
[2024-06-25 05:45:22] apptainer is not installed, using version from CVMFS
[2024-06-25 05:45:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 05:45:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-25 05:45:23] apptainer works
[2024-06-25 05:45:23] Set ATHENA_PROC_NUMBER=4
[2024-06-25 05:45:23] Set ATHENA_CORE_NUMBER=4
[2024-06-25 05:45:23] Starting ATLAS job with PandaID=6243259329
[2024-06-25 05:45:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-25 17:55:33]  *** The last 200 lines of the pilot log: ***
[2024-06-25 17:55:33] 2024-06-25 15:55:20,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-25 17:55:33] 2024-06-25 15:55:20,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-25 17:55:33] 2024-06-25 15:55:20,481 | INFO     | fitting pss+swap vs Time
[2024-06-25 17:55:33] 2024-06-25 15:55:20,482 | INFO     | model: linear, x: [1719287153.0, 1719287214.0, 1719287275.0, 1719287336.0, 1719287397.0, 1719287458.0, 1719287519.0, 1719287580.0, 1719287641.0, 1719287702.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,483 | INFO     | sum of square deviations: 114775954799.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,496 | INFO     | sum of deviations: 281803215057.0002
[2024-06-25 17:55:33] 2024-06-25 15:55:20,497 | INFO     | mean x: 1719309021.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,497 | INFO     | mean y: 2360618.980501393
[2024-06-25 17:55:33] 2024-06-25 15:55:20,497 | INFO     | -- intersect: -4218966145.68533
[2024-06-25 17:55:33] 2024-06-25 15:55:20,497 | INFO     | intersect: -4218966145.68533
[2024-06-25 17:55:33] 2024-06-25 15:55:20,498 | INFO     | chi2: 4.1794691474286925
[2024-06-25 17:55:33] 2024-06-25 15:55:20,499 | INFO     | model: linear, x: [1719287153.0, 1719287214.0, 1719287275.0, 1719287336.0, 1719287397.0, 1719287458.0, 1719287519.0, 1719287580.0, 1719287641.0, 1719287702.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,499 | INFO     | sum of square deviations: 112394784572.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,512 | INFO     | sum of deviations: 325868228466.0002
[2024-06-25 17:55:33] 2024-06-25 15:55:20,512 | INFO     | mean x: 1719308869.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,512 | INFO     | mean y: 2363424.2973352033
[2024-06-25 17:55:33] 2024-06-25 15:55:20,512 | INFO     | -- intersect: -4982459825.824249
[2024-06-25 17:55:33] 2024-06-25 15:55:20,513 | INFO     | intersect: -4982459825.824249
[2024-06-25 17:55:33] 2024-06-25 15:55:20,513 | INFO     | chi2: 3.377511272476918
[2024-06-25 17:55:33] 2024-06-25 15:55:20,513 | INFO     | current chi2=3.377511272476918 (change=19.188031940495545 %)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,513 | INFO     | right removable region: 712
[2024-06-25 17:55:33] 2024-06-25 15:55:20,514 | INFO     | model: linear, x: [1719287458.0, 1719287519.0, 1719287580.0, 1719287641.0, 1719287702.0, 1719287763.0, 1719287824.0, 1719287885.0, 1719287946.0, 1719288007.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,514 | INFO     | sum of square deviations: 112394784572.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | sum of deviations: 121641630490.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | mean x: 1719309174.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | mean y: 2370865.267882188
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | -- intersect: -1858387817.0693796
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | intersect: -1858387817.0693796
[2024-06-25 17:55:33] 2024-06-25 15:55:20,521 | INFO     | chi2: 2.033467790068395
[2024-06-25 17:55:33] 2024-06-25 15:55:20,522 | INFO     | current chi2=2.033467790068395 (change=51.34626627595919 %)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,522 | INFO     | model: linear, x: [1719287763.0, 1719287824.0, 1719287885.0, 1719287946.0, 1719288007.0, 1719288068.0, 1719288129.0, 1719288190.0, 1719288251.0, 1719288312.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,522 | INFO     | sum of square deviations: 110046777757.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,529 | INFO     | sum of deviations: 3702809434.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,529 | INFO     | mean x: 1719309326.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,529 | INFO     | mean y: 2378525.0790960453
[2024-06-25 17:55:33] 2024-06-25 15:55:20,529 | INFO     | -- intersect: -55472099.20893252
[2024-06-25 17:55:33] 2024-06-25 15:55:20,529 | INFO     | intersect: -55472099.20893252
[2024-06-25 17:55:33] 2024-06-25 15:55:20,530 | INFO     | chi2: 0.988647397337099
[2024-06-25 17:55:33] 2024-06-25 15:55:20,530 | INFO     | current chi2=0.988647397337099 (change=51.381211831054074 %)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,530 | INFO     | model: linear, x: [1719288068.0, 1719288129.0, 1719288190.0, 1719288251.0, 1719288312.0, 1719288373.0, 1719288434.0, 1719288495.0, 1719288556.0, 1719288617.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,531 | INFO     | sum of square deviations: 107731701792.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,537 | INFO     | sum of deviations: -4827341445.000015
[2024-06-25 17:55:33] 2024-06-25 15:55:20,537 | INFO     | mean x: 1719309479.0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,537 | INFO     | mean y: 2379082.5775248935
[2024-06-25 17:55:33] 2024-06-25 15:55:20,537 | INFO     | -- intersect: 79419487.27457951
[2024-06-25 17:55:33] 2024-06-25 15:55:20,541 | WARNING  | process 1561430 is no longer using CPU - aborting
[2024-06-25 17:55:33] 2024-06-25 15:55:20,541 | INFO     | intersect: 79419487.27457951
[2024-06-25 17:55:33] 2024-06-25 15:55:20,541 | INFO     | chi2: 0.9561166451743344
[2024-06-25 17:55:33] 2024-06-25 15:55:20,542 | INFO     | current chi2=0.9561166451743344 (change=3.290430162501371 %)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,542 | INFO     | left removable region: 30
[2024-06-25 17:55:33] 2024-06-25 15:55:20,542 | INFO     | model: linear, x: [1719288983.0, 1719289044.0, 1719289105.0, 1719289166.0, 1719289227.0, 1719289288.0, 1719289349.0, 1719289410.0, 1719289471.0, 1719289532.0, 1719
[2024-06-25 17:55:33] 2024-06-25 15:55:20,542 | INFO     | sum of square deviations: 98362739150.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,548 | INFO     | sum of deviations: 100693719218.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,548 | INFO     | mean x: 1719309753.5
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | mean y: 2377880.1774193547
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | -- intersect: -1757675724.1012228
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | intersect: -1757675724.1012228
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | chi2: 0.023793863134028283
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | -- intersect: -1757675724.1012228
[2024-06-25 17:55:33] 2024-06-25 15:55:20,549 | INFO     | current memory leak: 1.02 B/s (using 682 data points, chi2=0.02)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | ..............................
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . Timing measurements:
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . get job = 0 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . initial setup = 1 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . payload setup = 4 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . stage-in = 0 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . payload execution = 43762 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . stage-out = 1 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | . log creation = 0 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,550 | INFO     | ..............................
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | 
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | job summary report
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | --------------------------------------------------
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | PanDA job id: 6243259329
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | task id: 38921007
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | errors: (none)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | pilot state: finished 
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | transexitcode: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | exeerrorcode: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | exeerrordiag: 
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | exitcode: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,607 | INFO     | exitmsg: OK
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | cpuconsumptiontime: 171493 s
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | nevents: 400
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | neventsw: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | pid: 1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | pgrp: 1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | corecount: 4
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | event service: False
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | sizes: {0: 2387019, 3: 2387225, 11: 2387253, 43769: 2431687, 43770: 2431686, 43772: 2440906, 43776: 2441020}
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | --------------------------------------------------
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | 
[2024-06-25 17:55:33] 2024-06-25 15:55:20,608 | INFO     | executing command: ls -lF /scratch/boinc/var/slot4/slots/0
[2024-06-25 17:55:33] 2024-06-25 15:55:20,621 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | job 6243259329 has completed (purged errors)
[2024-06-25 17:55:33] 2024-06-25 15:55:20,623 | INFO     | overall cleanup function is called
[2024-06-25 17:55:33] 2024-06-25 15:55:21,630 | INFO     | --- collectZombieJob: --- 10, [1561430]
[2024-06-25 17:55:33] 2024-06-25 15:55:21,630 | INFO     | zombie collector waiting for pid 1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:21,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-25 17:55:33] 2024-06-25 15:55:22,635 | INFO     | collected zombie processes
[2024-06-25 17:55:33] 2024-06-25 15:55:22,636 | INFO     | will now attempt to kill all subprocesses of pid=1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:22,738 | INFO     | process IDs to be killed: [1561430] (in reverse order)
[2024-06-25 17:55:33] 2024-06-25 15:55:22,798 | WARNING  | found no corresponding commands to process id(s)
[2024-06-25 17:55:33] 2024-06-25 15:55:22,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-25 17:55:33] 2024-06-25 15:55:22,802 | INFO     | did not find any defunct processes belonging to 1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:22,805 | INFO     | did not find any defunct processes belonging to 1561430
[2024-06-25 17:55:33] 2024-06-25 15:55:22,805 | INFO     | ready for new job
[2024-06-25 17:55:33] 2024-06-25 15:55:22,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-25 17:55:33] 2024-06-25 15:55:22,807 | INFO     | *************************************
[2024-06-25 17:55:33] 2024-06-25 15:55:22,808 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-25 17:55:33] 2024-06-25 15:55:22,808 | INFO     | *************************************
[2024-06-25 17:55:33] 2024-06-25 15:55:22,808 | INFO     | 
[2024-06-25 17:55:33] 2024-06-25 15:55:22,809 | INFO     | architecture information:
[2024-06-25 17:55:33] 2024-06-25 15:55:22,809 | INFO     | executing command: cat /etc/os-release
[2024-06-25 17:55:33] 2024-06-25 15:55:22,819 | INFO     | cat /etc/os-release:
[2024-06-25 17:55:33] NAME="CentOS Linux"
[2024-06-25 17:55:33] VERSION="7 (Core)"
[2024-06-25 17:55:33] ID="centos"
[2024-06-25 17:55:33] ID_LIKE="rhel fedora"
[2024-06-25 17:55:33] VERSION_ID="7"
[2024-06-25 17:55:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-25 17:55:33] ANSI_COLOR="0;31"
[2024-06-25 17:55:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-25 17:55:33] HOME_URL="https://www.centos.org/"
[2024-06-25 17:55:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-25 17:55:33] 
[2024-06-25 17:55:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-25 17:55:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-25 17:55:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-25 17:55:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-25 17:55:33] 
[2024-06-25 17:55:33] 2024-06-25 15:55:22,820 | INFO     | *************************************
[2024-06-25 17:55:33] 2024-06-25 15:55:23,322 | INFO     | executing command: df -mP /scratch/boinc/var/slot4/slots/0
[2024-06-25 17:55:33] 2024-06-25 15:55:23,336 | INFO     | sufficient remaining disk space (1690084311040 B)
[2024-06-25 17:55:33] 2024-06-25 15:55:23,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-25 17:55:33] 2024-06-25 15:55:23,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-25 17:55:33] 2024-06-25 15:55:23,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-25 17:55:33] 2024-06-25 15:55:23,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-25 17:55:33] 2024-06-25 15:55:23,952 | INFO     | all data control threads have been joined
[2024-06-25 17:55:33] 2024-06-25 15:55:23,963 | INFO     | found 0 job(s) in 20 queues
[2024-06-25 17:55:33] 2024-06-25 15:55:23,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-25 17:55:33] 2024-06-25 15:55:23,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-25 17:55:33] 2024-06-25 15:55:24,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:55:33] 2024-06-25 15:55:24,048 | INFO     | aborting loop
[2024-06-25 17:55:33] 2024-06-25 15:55:24,341 | INFO     | [job] retrieve thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:24,363 | INFO     | all job control threads have been joined
[2024-06-25 17:55:33] 2024-06-25 15:55:24,606 | INFO     | [job] validate thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:24,710 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:24,711 | INFO     | all payload control threads have been joined
[2024-06-25 17:55:33] 2024-06-25 15:55:24,753 | INFO     | [data] copytool_in thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:24,957 | INFO     | [data] control thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,053 | INFO     | [job] job monitor thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,111 | INFO     | [payload] validate_post thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,342 | INFO     | [data] copytool_out thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,368 | INFO     | [job] control thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,492 | INFO     | [payload] execute_payloads thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,493 | INFO     | [payload] failed_post thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,581 | INFO     | [payload] validate_pre thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-25 17:55:33] 2024-06-25 15:55:25,646 | INFO     | [job] create_data_payload thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:25,716 | INFO     | [payload] control thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:26,621 | INFO     | [job] queue monitor thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:27,342 | INFO     | [data] queue_monitor thread has finished
[2024-06-25 17:55:33] 2024-06-25 15:55:27,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47713848386624)>', '<ExcThread(monitor, started 47714030761728)>']
[2024-06-25 17:55:33] 2024-06-25 15:55:27,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-25 17:55:33] 2024-06-25 15:55:27,983 | INFO     | [monitor] control thread has ended
[2024-06-25 17:55:33] 2024-06-25 15:55:32,676 | INFO     | all workflow threads have been joined
[2024-06-25 17:55:33] 2024-06-25 15:55:32,677 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-25 17:55:33] 2024-06-25 15:55:32,677 | INFO     | traces error code: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:32,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-25 17:55:33] 2024-06-25 15:55:32,774 [wrapper] ==== pilot stdout END ====
[2024-06-25 17:55:33] 2024-06-25 15:55:32,776 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-25 17:55:33] 2024-06-25 15:55:32,778 [wrapper] pilotpid: 1554573
[2024-06-25 17:55:33] 2024-06-25 15:55:32,780 [wrapper] Pilot exit status: 0
[2024-06-25 17:55:33] 2024-06-25 15:55:32,787 [wrapper] pandaids: 6243259329
[2024-06-25 17:55:33] 2024-06-25 15:55:32,829 [wrapper] cleanup supervisor_pilot 2595109 1554574
[2024-06-25 17:55:33] 2024-06-25 15:55:32,831 [wrapper] Test setup, not cleaning
[2024-06-25 17:55:33] 2024-06-25 15:55:32,833 [wrapper] ==== wrapper stdout END ====
[2024-06-25 17:55:33] 2024-06-25 15:55:32,834 [wrapper] ==== wrapper stderr END ====
[2024-06-25 17:55:33] 2024-06-25 15:55:32,837 [wrapper] apfmon messages muted
[2024-06-25 17:55:33]  *** Error codes and diagnostics ***
[2024-06-25 17:55:33]     "exeErrorCode": 0,
[2024-06-25 17:55:33]     "exeErrorDiag": "",
[2024-06-25 17:55:33]     "pilotErrorCode": 0,
[2024-06-25 17:55:33]     "pilotErrorDiag": "",
[2024-06-25 17:55:33]  *** Listing of results directory ***
[2024-06-25 17:55:33] total 923448
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc    469766 Jun 25 01:58 pilot3.tar.gz
[2024-06-25 17:55:33] -rwx------ 1 boinc boinc     32220 Jun 25 02:41 runpilot2-wrapper.sh
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc      5654 Jun 25 02:41 queuedata.json
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc       100 Jun 25 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-25 17:55:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 25 05:45 run_atlas
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc       105 Jun 25 05:45 job.xml
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc 582920592 Jun 25 05:45 EVNT.38776201._000488.pool.root.1
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc      6450 Jun 25 05:45 init_data.xml
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc     17537 Jun 25 05:45 start_atlas.sh
[2024-06-25 17:55:33] drwxrwx--x 2 boinc boinc      4096 Jun 25 05:45 shared
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc    482517 Jun 25 05:45 input.tar.gz
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc         0 Jun 25 05:45 boinc_lockfile
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc      2631 Jun 25 05:45 pandaJob.out
[2024-06-25 17:55:33] -rw------- 1 boinc boinc       424 Jun 25 05:45 setup.sh.local
[2024-06-25 17:55:33] -rw------- 1 boinc boinc   1020981 Jun 25 05:45 agis_schedconf.cvmfs.json
[2024-06-25 17:55:33] -rw------- 1 boinc boinc   1321363 Jun 25 05:45 cric_ddmendpoints.json
[2024-06-25 17:55:33] drwx------ 4 boinc boinc      4096 Jun 25 05:45 pilot3
[2024-06-25 17:55:33] -rw------- 1 boinc boinc 347278097 Jun 25 17:54 HITS.38921007._054982.pool.root.1
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc       533 Jun 25 17:54 boinc_task_state.xml
[2024-06-25 17:55:33] -rw------- 1 boinc boinc        95 Jun 25 17:54 pilot_heartbeat.json
[2024-06-25 17:55:33] -rw------- 1 boinc boinc      1042 Jun 25 17:55 memory_monitor_summary.json
[2024-06-25 17:55:33] -rw------- 1 boinc boinc         0 Jun 25 17:55 agis_ddmendpoints.agis.ALL.json
[2024-06-25 17:55:33] -rw------- 1 boinc boinc    665942 Jun 25 17:55 log.38921007._054982.job.log.tgz.1
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc      8192 Jun 25 17:55 boinc_mmap_file
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc        29 Jun 25 17:55 wrapper_checkpoint.txt
[2024-06-25 17:55:33] -rw------- 1 boinc boinc      7763 Jun 25 17:55 heartbeat.json
[2024-06-25 17:55:33] -rw------- 1 boinc boinc      4221 Jun 25 17:55 pilotlog.txt
[2024-06-25 17:55:33] -rw------- 1 boinc boinc   5274702 Jun 25 17:55 log.38921007._054982.job.log.1
[2024-06-25 17:55:33] -rw------- 1 boinc boinc       357 Jun 25 17:55 output.list
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc       620 Jun 25 17:55 runtime_log
[2024-06-25 17:55:33] -rw------- 1 boinc boinc   5959680 Jun 25 17:55 result.tar.gz
[2024-06-25 17:55:33] -rw------- 1 boinc boinc       660 Jun 25 17:55 tJXNDmcQ9f5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmiNoKDmyaEdWm.diag
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc     11391 Jun 25 17:55 runtime_log.err
[2024-06-25 17:55:33] -rw-r--r-- 1 boinc boinc     21288 Jun 25 17:55 stderr.txt
[2024-06-25 17:55:33] HITS file was successfully produced:
[2024-06-25 17:55:33] -rw------- 1 boinc boinc 347278097 Jun 25 17:54 shared/HITS.pool.root.1
[2024-06-25 17:55:33]  *** Contents of shared directory: ***
[2024-06-25 17:55:33] total 914720
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc 582920592 Jun 25 05:45 ATLAS.root_0
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc     17537 Jun 25 05:45 start_atlas.sh
[2024-06-25 17:55:33] -rw-r--r-- 2 boinc boinc    482517 Jun 25 05:45 input.tar.gz
[2024-06-25 17:55:33] -rw------- 1 boinc boinc 347278097 Jun 25 17:54 HITS.pool.root.1
[2024-06-25 17:55:33] -rw------- 1 boinc boinc   5959680 Jun 25 17:55 result.tar.gz
17:55:34 (1550913): run_atlas exited; CPU time 171131.014351
17:55:34 (1550913): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN