Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:06:38 (2127984): wrapper (7.7.26015): starting
12:06:38 (2127984): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 12:06:38] Arguments: --nthreads 4
[2024-06-24 12:06:38] Threads: 4
[2024-06-24 12:06:38] Checking for CVMFS
[2024-06-24 12:06:38] No cvmfs_config command found, will try listing directly
[2024-06-24 12:06:45] CVMFS is ok
[2024-06-24 12:06:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 12:06:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 12:06:45] Further information can be found at the LHC@home message board.
[2024-06-24 12:06:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 12:06:45] Checking for apptainer binary...
[2024-06-24 12:06:45] which: no apptainer in ((null))
[2024-06-24 12:06:45] apptainer is not installed, using version from CVMFS
[2024-06-24 12:06:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 12:06:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-24 12:06:46] apptainer works
[2024-06-24 12:06:46] Set ATHENA_PROC_NUMBER=4
[2024-06-24 12:06:46] Set ATHENA_CORE_NUMBER=4
[2024-06-24 12:06:46] Starting ATLAS job with PandaID=6242688681
[2024-06-24 12:06:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 12:10:38]  *** The last 200 lines of the pilot log: ***
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | WARNING  | GPU info not found in prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | found no stored workdir sizes
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | INFO     | will not add max space = 0 B to job metrics
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | WARNING  | wrong length of table data, x=[1719223684.0], y=[5742.0] (must be same and length>=4)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . Timing measurements:
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . get job = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . initial setup = 1 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload setup = 5 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . stage-in = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload execution = 18 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . stage-out = 4 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . log creation = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot104/slots/1/PanDA_Pilot-6242688681/pilotlog.txt
[2024-06-24 12:10:38] 2024-06-24 10:10:25,516 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-24 12:10:38] - Log from pilotlog.txt -
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | INFO     | extracted standard info from prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | WARNING  | GPU info not found in prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | found no stored workdir sizes
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | INFO     | will not add max space = 0 B to job metrics
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | WARNING  | wrong length of table data, x=[1719223684.0], y=[5742.0] (must be same and length>=4)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . Timing measurements:
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . get job = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . initial setup = 1 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload setup = 5 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . stage-in = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload execution = 18 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . stage-out = 4 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . log creation = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot104/slots/1/PanDA_Pilot-6242688681/pilotlog.txt
[2024-06-24 12:10:38] 2024-06-24 10:10:25,516 | WARNING  | 
[2024-06-24 12:10:38] [begin log extracts]
[2024-06-24 12:10:38] - Log from pilotlog.txt -
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | INFO     | extracted standard info from prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,495 | WARNING  | GPU info not found in prmon json
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | WARNING  | found no stored workdir sizes
[2024-06-24 12:10:38] 2024-06-24 10:10:25,496 | INFO     | will not add max space = 0 B to job metrics
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | WARNING  | wrong length of table data, x=[1719223684.0], y=[5742.0] (must be same and length>=4)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . Timing measurements:
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . get job = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . initial setup = 1 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload setup = 5 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . stage-in = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,497 | INFO     | . payload execution = 18 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . stage-out = 4 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | . log creation = 0 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | ..............................
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-24 12:10:38] 2024-06-24 10:10:25,498 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot104/slots/1/PanDA_Pilot-6242688681/pilotlog.txt
[2024-06-24 12:10:38] [end log extracts]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,516 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,516 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-24 12:08:14,160 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-24 12:10:38] 2024-06-24 10:10:25,829 | INFO     | 
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | job summary report
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | --------------------------------------------------
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | PanDA job id: 6242688681
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | task id: 38921013
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-24 12:08:14,160 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | pilot state: failed 
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | transexitcode: 65
[2024-06-24 12:10:38] 2024-06-24 10:10:25,830 | INFO     | exeerrorcode: 65
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | exitcode: 65
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | cpuconsumptiontime: 22 s
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | nevents: 0
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | neventsw: 0
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | pid: 2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | pgrp: 2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | corecount: 4
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | event service: False
[2024-06-24 12:10:38] 2024-06-24 10:10:25,831 | INFO     | sizes: {0: 2385575, 1: 2387123, 5: 2387329, 12: 2387385, 28: 2410614, 29: 2414851, 32: 2415007, 33: 2415063, 152: 2415177}
[2024-06-24 12:10:38] 2024-06-24 10:10:25,832 | INFO     | --------------------------------------------------
[2024-06-24 12:10:38] 2024-06-24 10:10:25,832 | INFO     | 
[2024-06-24 12:10:38] 2024-06-24 10:10:25,832 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/1
[2024-06-24 12:10:38] 2024-06-24 10:10:25,851 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,853 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,854 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 12:10:38] 2024-06-24 10:10:25,854 | INFO     | job 6242688681 has completed (purged errors)
[2024-06-24 12:10:38] 2024-06-24 10:10:25,854 | INFO     | overall cleanup function is called
[2024-06-24 12:10:38] 2024-06-24 10:10:26,860 | INFO     | --- collectZombieJob: --- 10, [2140756]
[2024-06-24 12:10:38] 2024-06-24 10:10:26,860 | INFO     | zombie collector waiting for pid 2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:26,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 12:10:38] 2024-06-24 10:10:27,866 | INFO     | collected zombie processes
[2024-06-24 12:10:38] 2024-06-24 10:10:27,866 | INFO     | will now attempt to kill all subprocesses of pid=2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:28,043 | INFO     | process IDs to be killed: [2140756] (in reverse order)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,162 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 12:10:38] 2024-06-24 10:10:28,173 | INFO     | did not find any defunct processes belonging to 2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:28,182 | INFO     | did not find any defunct processes belonging to 2140756
[2024-06-24 12:10:38] 2024-06-24 10:10:28,182 | INFO     | ready for new job
[2024-06-24 12:10:38] 2024-06-24 10:10:28,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 12:10:38] 2024-06-24 10:10:28,183 | INFO     | *************************************
[2024-06-24 12:10:38] 2024-06-24 10:10:28,183 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 12:10:38] 2024-06-24 10:10:28,184 | INFO     | *************************************
[2024-06-24 12:10:38] 2024-06-24 10:10:28,184 | INFO     | 
[2024-06-24 12:10:38] 2024-06-24 10:10:28,193 | INFO     | architecture information:
[2024-06-24 12:10:38] 2024-06-24 10:10:28,193 | INFO     | executing command: cat /etc/os-release
[2024-06-24 12:10:38] 2024-06-24 10:10:28,213 | INFO     | cat /etc/os-release:
[2024-06-24 12:10:38] NAME="CentOS Linux"
[2024-06-24 12:10:38] VERSION="7 (Core)"
[2024-06-24 12:10:38] ID="centos"
[2024-06-24 12:10:38] ID_LIKE="rhel fedora"
[2024-06-24 12:10:38] VERSION_ID="7"
[2024-06-24 12:10:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 12:10:38] ANSI_COLOR="0;31"
[2024-06-24 12:10:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 12:10:38] HOME_URL="https://www.centos.org/"
[2024-06-24 12:10:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 12:10:38] 
[2024-06-24 12:10:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 12:10:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 12:10:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 12:10:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 12:10:38] 
[2024-06-24 12:10:38] 2024-06-24 10:10:28,213 | INFO     | *************************************
[2024-06-24 12:10:38] 2024-06-24 10:10:28,716 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/1
[2024-06-24 12:10:38] 2024-06-24 10:10:28,737 | INFO     | sufficient remaining disk space (3301532762112 B)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 12:10:38] 2024-06-24 10:10:28,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,738 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 12:10:38] 2024-06-24 10:10:28,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 12:10:38] 2024-06-24 10:10:28,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 12:10:38] 2024-06-24 10:10:28,869 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-24 12:10:38] 2024-06-24 10:10:28,869 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-24 12:10:38] 2024-06-24 10:10:28,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 12:10:38] 2024-06-24 10:10:28,870 | INFO     | will abort loop
[2024-06-24 12:10:38] 2024-06-24 10:10:28,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 12:10:38] 2024-06-24 10:10:29,115 | INFO     | all job control threads have been joined
[2024-06-24 12:10:38] 2024-06-24 10:10:29,603 | INFO     | all data control threads have been joined
[2024-06-24 12:10:38] 2024-06-24 10:10:29,742 | INFO     | [job] retrieve thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:29,799 | INFO     | [data] copytool_in thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:29,875 | INFO     | [job] job monitor thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:29,936 | INFO     | [job] validate thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:29,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 12:10:38] 2024-06-24 10:10:30,096 | INFO     | all payload control threads have been joined
[2024-06-24 12:10:38] 2024-06-24 10:10:30,120 | INFO     | [job] control thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,163 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,164 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,256 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,608 | INFO     | [data] control thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 12:10:38] 2024-06-24 10:10:30,801 | INFO     | [payload] failed_post thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,867 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:30,883 | INFO     | [payload] validate_post thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:31,101 | INFO     | [payload] control thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:31,638 | INFO     | [job] queue monitor thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:31,968 | INFO     | [data] copytool_out thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:32,963 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 12:10:38] 2024-06-24 10:10:33,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47222204204096)>', '<ExcThread(monitor, started 47222401939200)>']
[2024-06-24 12:10:38] 2024-06-24 10:10:33,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 12:10:38] 2024-06-24 10:10:33,763 | INFO     | [monitor] control thread has ended
[2024-06-24 12:10:38] 2024-06-24 10:10:38,039 | INFO     | all workflow threads have been joined
[2024-06-24 12:10:38] 2024-06-24 10:10:38,039 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 12:10:38] 2024-06-24 10:10:38,039 | INFO     | traces error code: 0
[2024-06-24 12:10:38] 2024-06-24 10:10:38,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 12:10:38] 2024-06-24 10:10:38,138 [wrapper] ==== pilot stdout END ====
[2024-06-24 12:10:38] 2024-06-24 10:10:38,140 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 12:10:38] 2024-06-24 10:10:38,143 [wrapper] pilotpid: 2133216
[2024-06-24 12:10:38] 2024-06-24 10:10:38,144 [wrapper] Pilot exit status: 0
[2024-06-24 12:10:38] 2024-06-24 10:10:38,153 [wrapper] pandaids: 6242688681
[2024-06-24 12:10:38] 2024-06-24 10:10:38,227 [wrapper] cleanup supervisor_pilot 2133221 2133217
[2024-06-24 12:10:38] 2024-06-24 10:10:38,230 [wrapper] Test setup, not cleaning
[2024-06-24 12:10:38] 2024-06-24 10:10:38,233 [wrapper] ==== wrapper stdout END ====
[2024-06-24 12:10:38] 2024-06-24 10:10:38,235 [wrapper] ==== wrapper stderr END ====
[2024-06-24 12:10:38] 2024-06-24 10:10:38,241 [wrapper] apfmon messages muted
[2024-06-24 12:10:38]  *** Error codes and diagnostics ***
[2024-06-24 12:10:38]     "exeErrorCode": 65,
[2024-06-24 12:10:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-24 12:10:38]     "pilotErrorCode": 1305,
[2024-06-24 12:10:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-24 12:08:14,160 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-24 12:10:38]  *** Listing of results directory ***
[2024-06-24 12:10:38] total 530880
[2024-06-24 12:10:38] -rwx------ 1 boinc boinc     32220 Jun 24 11:32 runpilot2-wrapper.sh
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc    469766 Jun 24 11:32 pilot3.tar.gz
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc      5654 Jun 24 11:32 queuedata.json
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc       100 Jun 24 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 12:10:38] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 11:48 run_atlas
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc       105 Jun 24 11:48 job.xml
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc      6644 Jun 24 12:06 init_data.xml
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc 539891530 Jun 24 12:06 EVNT.38776210._000509.pool.root.1
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc     17537 Jun 24 12:06 start_atlas.sh
[2024-06-24 12:10:38] drwxrwx--x 2 boinc boinc      4096 Jun 24 12:06 shared
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc    482510 Jun 24 12:06 input.tar.gz
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc         0 Jun 24 12:06 boinc_lockfile
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc      2647 Jun 24 12:06 pandaJob.out
[2024-06-24 12:10:38] -rw------- 1 boinc boinc       424 Jun 24 12:06 setup.sh.local
[2024-06-24 12:10:38] -rw------- 1 boinc boinc   1025930 Jun 24 12:07 agis_schedconf.cvmfs.json
[2024-06-24 12:10:38] -rw------- 1 boinc boinc         0 Jun 24 12:07 agis_ddmendpoints.agis.ALL.json
[2024-06-24 12:10:38] -rw------- 1 boinc boinc   1321363 Jun 24 12:07 cric_ddmendpoints.json
[2024-06-24 12:10:38] drwx------ 4 boinc boinc      4096 Jun 24 12:07 pilot3
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc       523 Jun 24 12:08 boinc_task_state.xml
[2024-06-24 12:10:38] -rw------- 1 boinc boinc       943 Jun 24 12:08 memory_monitor_summary.json
[2024-06-24 12:10:38] -rw------- 1 boinc boinc     20513 Jun 24 12:08 log.38921013._054893.job.log.tgz.1
[2024-06-24 12:10:38] -rw------- 1 boinc boinc        95 Jun 24 12:09 pilot_heartbeat.json
[2024-06-24 12:10:38] -rw------- 1 boinc boinc      8352 Jun 24 12:10 heartbeat.json
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc      8192 Jun 24 12:10 boinc_mmap_file
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc        22 Jun 24 12:10 wrapper_checkpoint.txt
[2024-06-24 12:10:38] -rw------- 1 boinc boinc      4532 Jun 24 12:10 pilotlog.txt
[2024-06-24 12:10:38] -rw------- 1 boinc boinc     76160 Jun 24 12:10 log.38921013._054893.job.log.1
[2024-06-24 12:10:38] -rw------- 1 boinc boinc       188 Jun 24 12:10 output.list
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc       620 Jun 24 12:10 runtime_log
[2024-06-24 12:10:38] -rw------- 1 boinc boinc    112640 Jun 24 12:10 result.tar.gz
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc     11275 Jun 24 12:10 runtime_log.err
[2024-06-24 12:10:38] -rw------- 1 boinc boinc       643 Jun 24 12:10 aA0MDmvEvf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmlqrKDmNSRzjm.diag
[2024-06-24 12:10:38] -rw-r--r-- 1 boinc boinc     21384 Jun 24 12:10 stderr.txt
[2024-06-24 12:10:38] No HITS result produced
[2024-06-24 12:10:38]  *** Contents of shared directory: ***
[2024-06-24 12:10:38] total 527848
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc 539891530 Jun 24 12:06 ATLAS.root_0
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc     17537 Jun 24 12:06 start_atlas.sh
[2024-06-24 12:10:38] -rw-r--r-- 2 boinc boinc    482510 Jun 24 12:06 input.tar.gz
[2024-06-24 12:10:38] -rw------- 1 boinc boinc    112640 Jun 24 12:10 result.tar.gz
12:10:40 (2127984): run_atlas exited; CPU time 21.099488
12:10:40 (2127984): called boinc_finish(0)

</stderr_txt>
]]>

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