Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:39 (40917): wrapper (7.7.26015): starting
00:38:39 (40917): wrapper: running run_atlas (--nthreads 8)
[2024-06-24 00:38:39] Arguments: --nthreads 8
[2024-06-24 00:38:39] Threads: 8
[2024-06-24 00:38:39] Checking for CVMFS
[2024-06-24 00:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-24 00:38:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-24 00:38:40] Running cvmfs_config stat atlas.cern.ch
[2024-06-24 00:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-24 00:38:42] 2.11.2.0 25751 11575 135864 134225 2 156 18096010 18432001 34991 130560 0 32416216 99.648 19199983 36130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-24 00:38:42] CVMFS is ok
[2024-06-24 00:38:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 00:38:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 00:38:42] Further information can be found at the LHC@home message board.
[2024-06-24 00:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 00:38:42] Checking for apptainer binary...
[2024-06-24 00:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-24 00:38:42] Running /usr/bin/apptainer --version
[2024-06-24 00:38:43] apptainer version 1.3.2-1.el7
[2024-06-24 00:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 00:39:13] c-210-40.aglt2.org
[2024-06-24 00:39:13] apptainer works
[2024-06-24 00:39:13] Set ATHENA_PROC_NUMBER=8
[2024-06-24 00:39:13] Set ATHENA_CORE_NUMBER=8
[2024-06-24 00:39:13] Starting ATLAS job with PandaID=6242561160
[2024-06-24 00:39:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 13:35:04]  *** The last 200 lines of the pilot log: ***
[2024-06-24 13:35:04] 2024-06-24 17:34:36,837 | INFO     | total number of processed events: 400 (read)
[2024-06-24 13:35:04] 2024-06-24 17:34:36,840 | INFO     | executing command: lscpu
[2024-06-24 13:35:04] 2024-06-24 17:34:36,896 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-24 13:35:04] 2024-06-24 17:34:36,897 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-24 13:35:04] 2024-06-24 17:34:36,940 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-24 13:35:04] 2024-06-24 17:34:37,871 | INFO     | monitor loop #2995: job 0:6242561160 is in state 'finished'
[2024-06-24 13:35:04] 2024-06-24 17:34:37,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-24 13:35:04] 2024-06-24 17:34:38,962 | INFO     | 46332s have passed since pilot start
[2024-06-24 13:35:04] 2024-06-24 17:34:40,375 | INFO     | monitor loop #2996: job 0:6242561160 is in state 'finished'
[2024-06-24 13:35:04] 2024-06-24 17:34:40,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-24 13:35:04] 2024-06-24 17:34:42,879 | INFO     | monitor loop #2997: job 0:6242561160 is in state 'finished'
[2024-06-24 13:35:04] 2024-06-24 17:34:42,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,331 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-24 13:35:04] 2024-06-24 17:34:43,332 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6242561160/memory_monitor_summary.json (trf name=prmon)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,333 | INFO     | extracted standard info from prmon json
[2024-06-24 13:35:04] 2024-06-24 17:34:43,333 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 13:35:04] 2024-06-24 17:34:43,333 | WARNING  | GPU info not found in prmon json
[2024-06-24 13:35:04] 2024-06-24 17:34:43,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 13:35:04] 2024-06-24 17:34:43,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 13:35:04] 2024-06-24 17:34:43,343 | INFO     | fitting pss+swap vs Time
[2024-06-24 13:35:04] 2024-06-24 17:34:43,343 | INFO     | model: linear, x: [1719204557.0, 1719204618.0, 1719204679.0, 1719204740.0, 1719204801.0, 1719204862.0, 1719204923.0, 1719204984.0, 1719205045.0, 1719205106.0, 1719
[2024-06-24 13:35:04] 2024-06-24 17:34:43,344 | INFO     | sum of square deviations: 132391448777.5298
[2024-06-24 13:35:04] 2024-06-24 17:34:43,354 | INFO     | sum of deviations: 1918650636534.8577
[2024-06-24 13:35:04] 2024-06-24 17:34:43,354 | INFO     | mean x: 1719227493.0996015
[2024-06-24 13:35:04] 2024-06-24 17:34:43,355 | INFO     | mean y: 2428853.1885790173
[2024-06-24 13:35:04] 2024-06-24 17:34:43,355 | INFO     | -- intersect: -24913054393.216034
[2024-06-24 13:35:04] 2024-06-24 17:34:43,355 | INFO     | intersect: -24913054393.216034
[2024-06-24 13:35:04] 2024-06-24 17:34:43,355 | INFO     | chi2: 21.47910246910588
[2024-06-24 13:35:04] 2024-06-24 17:34:43,356 | INFO     | model: linear, x: [1719204557.0, 1719204618.0, 1719204679.0, 1719204740.0, 1719204801.0, 1719204862.0, 1719204923.0, 1719204984.0, 1719205045.0, 1719205106.0, 1719
[2024-06-24 13:35:04] 2024-06-24 17:34:43,356 | INFO     | sum of square deviations: 129771645787.47876
[2024-06-24 13:35:04] 2024-06-24 17:34:43,366 | INFO     | sum of deviations: 1958335936551.571
[2024-06-24 13:35:04] 2024-06-24 17:34:43,366 | INFO     | mean x: 1719227340.6002674
[2024-06-24 13:35:04] 2024-06-24 17:34:43,366 | INFO     | mean y: 2431146.139037433
[2024-06-24 13:35:04] 2024-06-24 17:34:43,366 | INFO     | -- intersect: -25941793139.289154
[2024-06-24 13:35:04] 2024-06-24 17:34:43,366 | INFO     | intersect: -25941793139.289154
[2024-06-24 13:35:04] 2024-06-24 17:34:43,367 | INFO     | chi2: 20.631402906584068
[2024-06-24 13:35:04] 2024-06-24 17:34:43,367 | INFO     | current chi2=20.631402906584068 (change=3.946624695985719 %)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,367 | INFO     | right removable region: 747
[2024-06-24 13:35:04] 2024-06-24 17:34:43,368 | INFO     | model: linear, x: [1719204862.0, 1719204923.0, 1719204984.0, 1719205045.0, 1719205106.0, 1719205167.0, 1719205228.0, 1719205289.0, 1719205350.0, 1719205411.0, 1719
[2024-06-24 13:35:04] 2024-06-24 17:34:43,368 | INFO     | sum of square deviations: 129771600037.47868
[2024-06-24 13:35:04] 2024-06-24 17:34:43,378 | INFO     | sum of deviations: 1661042876892.3047
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | mean x: 1719227645.6002674
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | mean y: 2443844.4893048126
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | -- intersect: -22003224835.37523
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | intersect: -22003224835.37523
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | chi2: 16.708451494012287
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | current chi2=16.708451494012287 (change=22.21066258217903 %)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,379 | INFO     | left removable region: 10
[2024-06-24 13:35:04] 2024-06-24 17:34:43,380 | INFO     | model: linear, x: [1719205167.0, 1719205228.0, 1719205289.0, 1719205350.0, 1719205411.0, 1719205472.0, 1719205533.0, 1719205594.0, 1719205655.0, 1719205716.0, 1719
[2024-06-24 13:35:04] 2024-06-24 17:34:43,380 | INFO     | sum of square deviations: 124130125813.36755
[2024-06-24 13:35:04] 2024-06-24 17:34:43,390 | INFO     | sum of deviations: 1481615359009.265
[2024-06-24 13:35:04] 2024-06-24 17:34:43,390 | INFO     | mean x: 1719227615.101764
[2024-06-24 13:35:04] 2024-06-24 17:34:43,390 | INFO     | mean y: 2459142.7964721844
[2024-06-24 13:35:04] 2024-06-24 17:34:43,390 | INFO     | -- intersect: -20518216426.30322
[2024-06-24 13:35:04] 2024-06-24 17:34:43,390 | INFO     | intersect: -20518216426.30322
[2024-06-24 13:35:04] 2024-06-24 17:34:43,391 | INFO     | chi2: 12.567284855400032
[2024-06-24 13:35:04] 2024-06-24 17:34:43,391 | INFO     | -- intersect: -20518216426.30322
[2024-06-24 13:35:04] 2024-06-24 17:34:43,391 | INFO     | current memory leak: 11.94 B/s (using 737 data points, chi2=12.57)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | ..............................
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . Timing measurements:
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . get job = 0 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . initial setup = 11 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . payload setup = 125 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . stage-in = 0 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . payload execution = 46033 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,392 | INFO     | . stage-out = 1 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,393 | INFO     | . log creation = 0 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,393 | INFO     | ..............................
[2024-06-24 13:35:04] 2024-06-24 17:34:43,729 | INFO     | 
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | job summary report
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | --------------------------------------------------
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | PanDA job id: 6242561160
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | task id: 38921013
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | errors: (none)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | pilot state: finished 
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | transexitcode: 0
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | exeerrorcode: 0
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | exeerrordiag: 
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | exitcode: 0
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | exitmsg: OK
[2024-06-24 13:35:04] 2024-06-24 17:34:43,730 | INFO     | cpuconsumptiontime: 145969 s
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | nevents: 400
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | neventsw: 0
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | pid: 64509
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | pgrp: 64509
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | corecount: 8
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | event service: False
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | sizes: {0: 2386066, 1: 2386830, 2: 2387029, 13: 2387029, 24: 2387085, 35: 2387113, 45: 2387269, 56: 2387297, 67: 2387325, 74: 2387559, 78: 2387587, 46162: 2432595,
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | --------------------------------------------------
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | 
[2024-06-24 13:35:04] 2024-06-24 17:34:43,731 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | job 6242561160 has completed (purged errors)
[2024-06-24 13:35:04] 2024-06-24 17:34:43,768 | INFO     | overall cleanup function is called
[2024-06-24 13:35:04] 2024-06-24 17:34:44,791 | INFO     | --- collectZombieJob: --- 10, [64509]
[2024-06-24 13:35:04] 2024-06-24 17:34:44,792 | INFO     | zombie collector waiting for pid 64509
[2024-06-24 13:35:04] 2024-06-24 17:34:44,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 13:35:04] 2024-06-24 17:34:45,797 | INFO     | collected zombie processes
[2024-06-24 13:35:04] 2024-06-24 17:34:45,798 | INFO     | will now attempt to kill all subprocesses of pid=64509
[2024-06-24 13:35:04] 2024-06-24 17:34:46,050 | INFO     | process IDs to be killed: [64509] (in reverse order)
[2024-06-24 13:35:04] 2024-06-24 17:34:46,185 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 13:35:04] 2024-06-24 17:34:46,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 13:35:04] 2024-06-24 17:34:46,197 | INFO     | did not find any defunct processes belonging to 64509
[2024-06-24 13:35:04] 2024-06-24 17:34:46,208 | INFO     | did not find any defunct processes belonging to 64509
[2024-06-24 13:35:04] 2024-06-24 17:34:46,208 | INFO     | ready for new job
[2024-06-24 13:35:04] 2024-06-24 17:34:46,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 13:35:04] 2024-06-24 17:34:46,211 | INFO     | *************************************
[2024-06-24 13:35:04] 2024-06-24 17:34:46,211 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 13:35:04] 2024-06-24 17:34:46,211 | INFO     | *************************************
[2024-06-24 13:35:04] 2024-06-24 17:34:46,212 | INFO     | 
[2024-06-24 13:35:04] 2024-06-24 17:34:46,214 | INFO     | architecture information:
[2024-06-24 13:35:04] 2024-06-24 17:34:46,215 | INFO     | executing command: cat /etc/os-release
[2024-06-24 13:35:04] 2024-06-24 17:34:46,237 | INFO     | cat /etc/os-release:
[2024-06-24 13:35:04] NAME="CentOS Linux"
[2024-06-24 13:35:04] VERSION="7 (Core)"
[2024-06-24 13:35:04] ID="centos"
[2024-06-24 13:35:04] ID_LIKE="rhel fedora"
[2024-06-24 13:35:04] VERSION_ID="7"
[2024-06-24 13:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 13:35:04] ANSI_COLOR="0;31"
[2024-06-24 13:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 13:35:04] HOME_URL="https://www.centos.org/"
[2024-06-24 13:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 13:35:04] 
[2024-06-24 13:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 13:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 13:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 13:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 13:35:04] 
[2024-06-24 13:35:04] 2024-06-24 17:34:46,238 | INFO     | *************************************
[2024-06-24 13:35:04] 2024-06-24 17:34:46,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-24 13:35:04] 2024-06-24 17:34:46,804 | INFO     | sufficient remaining disk space (75270979584 B)
[2024-06-24 13:35:04] 2024-06-24 17:34:46,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 13:35:04] 2024-06-24 17:34:46,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 13:35:04] 2024-06-24 17:34:46,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 13:35:04] 2024-06-24 17:34:46,805 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 13:35:04] 2024-06-24 17:34:46,805 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 13:35:04] 2024-06-24 17:34:46,805 | INFO     | aborting loop
[2024-06-24 13:35:04] 2024-06-24 17:34:46,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 13:35:04] 2024-06-24 17:34:46,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 13:35:04] 2024-06-24 17:34:46,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 13:35:04] 2024-06-24 17:34:46,881 | INFO     | all payload control threads have been joined
[2024-06-24 13:35:04] 2024-06-24 17:34:46,973 | INFO     | all data control threads have been joined
[2024-06-24 13:35:04] 2024-06-24 17:34:47,169 | INFO     | all job control threads have been joined
[2024-06-24 13:35:04] 2024-06-24 17:34:47,810 | INFO     | [job] retrieve thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:47,811 | INFO     | [job] job monitor thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:47,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 13:35:04] 2024-06-24 17:34:47,887 | INFO     | [payload] control thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:47,979 | INFO     | [data] control thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,174 | INFO     | [job] control thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,371 | INFO     | [payload] validate_post thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,405 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,439 | INFO     | [payload] failed_post thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 13:35:04] 2024-06-24 17:34:48,579 | INFO     | [job] validate thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,608 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,616 | INFO     | [data] copytool_in thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:48,653 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:49,486 | INFO     | [job] queue monitor thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:49,884 | INFO     | [data] copytool_out thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:50,813 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:57,628 | INFO     | job.realtimelogging is not enabled
[2024-06-24 13:35:04] 2024-06-24 17:34:58,635 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 13:35:04] 2024-06-24 17:34:59,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285365974848)>', '<ExcThread(monitor, started 140285065537280)>']
[2024-06-24 13:35:04] 2024-06-24 17:34:59,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 13:35:04] 2024-06-24 17:34:59,884 | INFO     | [monitor] control thread has ended
[2024-06-24 13:35:04] 2024-06-24 17:35:04,402 | INFO     | all workflow threads have been joined
[2024-06-24 13:35:04] 2024-06-24 17:35:04,403 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 13:35:04] 2024-06-24 17:35:04,403 | INFO     | traces error code: 0
[2024-06-24 13:35:04] 2024-06-24 17:35:04,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 13:35:04] 2024-06-24 17:35:04,547 [wrapper] ==== pilot stdout END ====
[2024-06-24 13:35:04] 2024-06-24 17:35:04,552 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 13:35:04] 2024-06-24 17:35:04,556 [wrapper] pilotpid: 58514
[2024-06-24 13:35:04] 2024-06-24 17:35:04,558 [wrapper] Pilot exit status: 0
[2024-06-24 13:35:04] 2024-06-24 17:35:04,588 [wrapper] pandaids: 6242561160
[2024-06-24 13:35:04] 2024-06-24 17:35:04,676 [wrapper] cleanup supervisor_pilot 29994 58515
[2024-06-24 13:35:04] 2024-06-24 17:35:04,679 [wrapper] Test setup, not cleaning
[2024-06-24 13:35:04] 2024-06-24 17:35:04,684 [wrapper] ==== wrapper stdout END ====
[2024-06-24 13:35:04] 2024-06-24 17:35:04,687 [wrapper] ==== wrapper stderr END ====
[2024-06-24 13:35:04] 2024-06-24 17:35:04,692 [wrapper] apfmon messages muted
[2024-06-24 13:35:04]  *** Error codes and diagnostics ***
[2024-06-24 13:35:04]     "exeErrorCode": 0,
[2024-06-24 13:35:04]     "exeErrorDiag": "",
[2024-06-24 13:35:04]     "pilotErrorCode": 0,
[2024-06-24 13:35:04]     "pilotErrorDiag": "",
[2024-06-24 13:35:04]  *** Listing of results directory ***
[2024-06-24 13:35:04] total 883516
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas    469766 Jun 23 23:47 pilot3.tar.gz
[2024-06-24 13:35:04] -rwx------ 1 boincer umatlas     32308 Jun 24 00:37 runpilot2-wrapper.sh
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas      5654 Jun 24 00:37 queuedata.json
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas       100 Jun 24 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 13:35:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun 24 00:38 run_atlas
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas       105 Jun 24 00:38 job.xml
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas 543446620 Jun 24 00:38 EVNT.38776210._000285.pool.root.1
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas     17537 Jun 24 00:38 start_atlas.sh
[2024-06-24 13:35:04] drwxrwx--x 2 boincer umatlas      4096 Jun 24 00:38 shared
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas    482513 Jun 24 00:38 input.tar.gz
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas         0 Jun 24 00:38 boinc_lockfile
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas      2642 Jun 24 00:39 pandaJob.out
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas       467 Jun 24 00:39 setup.sh.local
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas   1024686 Jun 24 00:42 agis_schedconf.cvmfs.json
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas   1321363 Jun 24 00:42 cric_ddmendpoints.json
[2024-06-24 13:35:04] drwx------ 4 boincer umatlas      4096 Jun 24 00:42 pilot3
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas      6341 Jun 24 13:27 init_data.xml
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas 347559492 Jun 24 13:33 HITS.38921013._054835.pool.root.1
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas       533 Jun 24 13:33 boinc_task_state.xml
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas        95 Jun 24 13:34 pilot_heartbeat.json
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas      1087 Jun 24 13:34 memory_monitor_summary.json
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas         0 Jun 24 13:34 agis_ddmendpoints.agis.ALL.json
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas    712293 Jun 24 13:34 log.38921013._054835.job.log.tgz.1
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas      7768 Jun 24 13:34 heartbeat.json
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas      8192 Jun 24 13:34 boinc_mmap_file
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas        29 Jun 24 13:34 wrapper_checkpoint.txt
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas      4406 Jun 24 13:35 pilotlog.txt
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas   4374324 Jun 24 13:35 log.38921013._054835.job.log.1
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas       357 Jun 24 13:35 output.list
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas       620 Jun 24 13:35 runtime_log
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas   5109760 Jun 24 13:35 result.tar.gz
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas     11405 Jun 24 13:35 runtime_log.err
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas       655 Jun 24 13:35 csALDmndqf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmQqrKDmA1pwXn.diag
[2024-06-24 13:35:04] -rw-r--r-- 1 boincer umatlas     21864 Jun 24 13:35 stderr.txt
[2024-06-24 13:35:04] HITS file was successfully produced:
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas 347559492 Jun 24 13:33 shared/HITS.pool.root.1
[2024-06-24 13:35:04]  *** Contents of shared directory: ***
[2024-06-24 13:35:04] total 875620
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas 543446620 Jun 24 00:38 ATLAS.root_0
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas     17537 Jun 24 00:38 start_atlas.sh
[2024-06-24 13:35:04] -rw-r--r-- 2 boincer umatlas    482513 Jun 24 00:38 input.tar.gz
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas 347559492 Jun 24 13:33 HITS.pool.root.1
[2024-06-24 13:35:04] -rw------- 1 boincer umatlas   5109760 Jun 24 13:35 result.tar.gz
13:35:06 (40917): run_atlas exited; CPU time 142339.039366
13:35:06 (40917): called boinc_finish(0)

</stderr_txt>
]]>

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