Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:24 (157945): wrapper (7.7.26015): starting
23:38:24 (157945): wrapper: running run_atlas (--nthreads 8)
[2024-06-23 23:38:24] Arguments: --nthreads 8
[2024-06-23 23:38:24] Threads: 8
[2024-06-23 23:38:24] Checking for CVMFS
[2024-06-23 23:38:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 23:38:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 23:38:26] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 23:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 23:38:27] 2.11.2.0 204215 24994 155476 134224 2 91 12071175 18432000 18325 130560 0 21762472 99.430 22482144 40327 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-23 23:38:27] CVMFS is ok
[2024-06-23 23:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 23:38:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 23:38:27] Further information can be found at the LHC@home message board.
[2024-06-23 23:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 23:38:27] Checking for apptainer binary...
[2024-06-23 23:38:27] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 23:38:27] Running /usr/bin/apptainer --version
[2024-06-23 23:38:27] apptainer version 1.3.1-1.el7
[2024-06-23 23:38:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 23:38:42] c-211-35-3.aglt2.org
[2024-06-23 23:38:42] apptainer works
[2024-06-23 23:38:42] Set ATHENA_PROC_NUMBER=8
[2024-06-23 23:38:42] Set ATHENA_CORE_NUMBER=8
[2024-06-23 23:38:42] Starting ATLAS job with PandaID=6242537210
[2024-06-23 23:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 14:26:41]  *** The last 200 lines of the pilot log: ***
[2024-06-24 14:26:41] 2024-06-24 18:26:20,524 | INFO     | intersect: -7093897709.416448
[2024-06-24 14:26:41] 2024-06-24 18:26:20,525 | INFO     | chi2: 8.264018250346663
[2024-06-24 14:26:41] 2024-06-24 18:26:20,526 | INFO     | model: linear, x: [1719200650.0, 1719200711.0, 1719200772.0, 1719200833.0, 1719200894.0, 1719200955.0, 1719201016.0, 1719201077.0, 1719201138.0, 1719201199.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,527 | INFO     | sum of square deviations: 198609380068.29868
[2024-06-24 14:26:41] 2024-06-24 18:26:20,543 | INFO     | sum of deviations: 946291251933.554
[2024-06-24 14:26:41] 2024-06-24 18:26:20,543 | INFO     | mean x: 1719226910.6902552
[2024-06-24 14:26:41] 2024-06-24 18:26:20,543 | INFO     | mean y: 2517867.6612529
[2024-06-24 14:26:41] 2024-06-24 18:26:20,544 | INFO     | -- intersect: -8188884699.103096
[2024-06-24 14:26:41] 2024-06-24 18:26:20,544 | INFO     | intersect: -8188884699.103096
[2024-06-24 14:26:41] 2024-06-24 18:26:20,545 | INFO     | chi2: 6.728694272086012
[2024-06-24 14:26:41] 2024-06-24 18:26:20,545 | INFO     | current chi2=6.728694272086012 (change=18.578419501871814 %)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,545 | INFO     | right removable region: 861
[2024-06-24 14:26:41] 2024-06-24 18:26:20,546 | INFO     | model: linear, x: [1719200955.0, 1719201016.0, 1719201077.0, 1719201138.0, 1719201199.0, 1719201260.0, 1719201321.0, 1719201382.0, 1719201443.0, 1719201504.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,546 | INFO     | sum of square deviations: 198609280028.29886
[2024-06-24 14:26:41] 2024-06-24 18:26:20,575 | INFO     | sum of deviations: 569089226438.2699
[2024-06-24 14:26:41] 2024-06-24 18:26:20,575 | INFO     | mean x: 1719227215.6902552
[2024-06-24 14:26:41] 2024-06-24 18:26:20,575 | INFO     | mean y: 2524587.4129930395
[2024-06-24 14:26:41] 2024-06-24 18:26:20,575 | INFO     | -- intersect: -4923698830.291262
[2024-06-24 14:26:41] 2024-06-24 18:26:20,575 | INFO     | intersect: -4923698830.291262
[2024-06-24 14:26:41] 2024-06-24 18:26:20,576 | INFO     | chi2: 4.90437092578799
[2024-06-24 14:26:41] 2024-06-24 18:26:20,577 | INFO     | current chi2=4.90437092578799 (change=40.653919470927356 %)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,577 | INFO     | model: linear, x: [1719201260.0, 1719201321.0, 1719201382.0, 1719201443.0, 1719201504.0, 1719201565.0, 1719201626.0, 1719201687.0, 1719201748.0, 1719201809.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,578 | INFO     | sum of square deviations: 195173156280.61566
[2024-06-24 14:26:41] 2024-06-24 18:26:20,593 | INFO     | sum of deviations: 373426622983.9053
[2024-06-24 14:26:41] 2024-06-24 18:26:20,594 | INFO     | mean x: 1719227368.1913652
[2024-06-24 14:26:41] 2024-06-24 18:26:20,594 | INFO     | mean y: 2533270.3115519253
[2024-06-24 14:26:41] 2024-06-24 18:26:20,594 | INFO     | -- intersect: -3286880512.1972866
[2024-06-24 14:26:41] 2024-06-24 18:26:20,594 | INFO     | intersect: -3286880512.1972866
[2024-06-24 14:26:41] 2024-06-24 18:26:20,595 | INFO     | chi2: 3.180250623678516
[2024-06-24 14:26:41] 2024-06-24 18:26:20,595 | INFO     | current chi2=3.180250623678516 (change=35.15476965748585 %)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,596 | INFO     | model: linear, x: [1719201565.0, 1719201626.0, 1719201687.0, 1719201748.0, 1719201809.0, 1719201870.0, 1719201931.0, 1719201992.0, 1719202053.0, 1719202114.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,597 | INFO     | sum of square deviations: 191776893745.4321
[2024-06-24 14:26:41] 2024-06-24 18:26:20,613 | INFO     | sum of deviations: 203578798937.0564
[2024-06-24 14:26:41] 2024-06-24 18:26:20,613 | INFO     | mean x: 1719227520.6924882
[2024-06-24 14:26:41] 2024-06-24 18:26:20,613 | INFO     | mean y: 2540893.1338028167
[2024-06-24 14:26:41] 2024-06-24 18:26:20,613 | INFO     | -- intersect: -1822487487.1188445
[2024-06-24 14:26:41] 2024-06-24 18:26:20,613 | INFO     | intersect: -1822487487.1188445
[2024-06-24 14:26:41] 2024-06-24 18:26:20,615 | INFO     | chi2: 1.8381017635941355
[2024-06-24 14:26:41] 2024-06-24 18:26:20,615 | INFO     | current chi2=1.8381017635941355 (change=42.20261290388336 %)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,616 | INFO     | model: linear, x: [1719201870.0, 1719201931.0, 1719201992.0, 1719202053.0, 1719202114.0, 1719202175.0, 1719202236.0, 1719202297.0, 1719202359.0, 1719202420.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,616 | INFO     | sum of square deviations: 188420259860.24442
[2024-06-24 14:26:41] 2024-06-24 18:26:20,644 | INFO     | sum of deviations: 146204696442.2729
[2024-06-24 14:26:41] 2024-06-24 18:26:20,645 | INFO     | mean x: 1719227673.1936245
[2024-06-24 14:26:41] 2024-06-24 18:26:20,645 | INFO     | mean y: 2543497.272727273
[2024-06-24 14:26:41] 2024-06-24 18:26:20,645 | INFO     | -- intersect: -1331491177.4531636
[2024-06-24 14:26:41] 2024-06-24 18:26:20,645 | INFO     | intersect: -1331491177.4531636
[2024-06-24 14:26:41] 2024-06-24 18:26:20,646 | INFO     | chi2: 1.6897566324122244
[2024-06-24 14:26:41] 2024-06-24 18:26:20,646 | INFO     | current chi2=1.6897566324122244 (change=8.070561386756093 %)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,646 | INFO     | left removable region: 40
[2024-06-24 14:26:41] 2024-06-24 18:26:20,647 | INFO     | model: linear, x: [1719203090.0, 1719203151.0, 1719203213.0, 1719203274.0, 1719203334.0, 1719203395.0, 1719203457.0, 1719203517.0, 1719203578.0, 1719203639.0, 1719
[2024-06-24 14:26:41] 2024-06-24 18:26:20,647 | INFO     | sum of square deviations: 171595803010.03418
[2024-06-24 14:26:41] 2024-06-24 18:26:20,662 | INFO     | sum of deviations: 186501474534.86597
[2024-06-24 14:26:41] 2024-06-24 18:26:20,663 | INFO     | mean x: 1719228100.1973202
[2024-06-24 14:26:41] 2024-06-24 18:26:20,663 | INFO     | mean y: 2552085.9390986604
[2024-06-24 14:26:41] 2024-06-24 18:26:20,663 | INFO     | -- intersect: -1866016784.1854637
[2024-06-24 14:26:41] 2024-06-24 18:26:20,663 | INFO     | intersect: -1866016784.1854637
[2024-06-24 14:26:41] 2024-06-24 18:26:20,664 | INFO     | chi2: 0.022681491557845546
[2024-06-24 14:26:41] 2024-06-24 18:26:20,664 | INFO     | -- intersect: -1866016784.1854637
[2024-06-24 14:26:41] 2024-06-24 18:26:20,664 | INFO     | current memory leak: 1.09 B/s (using 821 data points, chi2=0.02)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | ..............................
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . Timing measurements:
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . get job = 0 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . initial setup = 6 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . payload setup = 68 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . stage-in = 0 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . payload execution = 52917 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . stage-out = 5 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | . log creation = 1 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,666 | INFO     | ..............................
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | 
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | job summary report
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | --------------------------------------------------
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | PanDA job id: 6242537210
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | task id: 38921001
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | errors: (none)
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 14:26:41] 2024-06-24 18:26:20,841 | INFO     | pilot state: finished 
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | transexitcode: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | exeerrorcode: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | exeerrordiag: 
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | exitcode: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | exitmsg: OK
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | cpuconsumptiontime: 147113 s
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | nevents: 400
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | neventsw: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | pid: 224281
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | pgrp: 224281
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | corecount: 8
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | event service: False
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | sizes: {0: 2386908, 1: 2387107, 12: 2387107, 23: 2387135, 34: 2387163, 42: 2387397, 45: 2387553, 52990: 2435578, 52996: 2444538, 52997: 2444594, 53058: 2444764}
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | --------------------------------------------------
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | 
[2024-06-24 14:26:41] 2024-06-24 18:26:20,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 14:26:41] 2024-06-24 18:26:21,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,115 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 14:26:41] 2024-06-24 18:26:21,115 | INFO     | job 6242537210 has completed (purged errors)
[2024-06-24 14:26:41] 2024-06-24 18:26:21,115 | INFO     | overall cleanup function is called
[2024-06-24 14:26:41] 2024-06-24 18:26:22,130 | INFO     | --- collectZombieJob: --- 10, [224281]
[2024-06-24 14:26:41] 2024-06-24 18:26:22,131 | INFO     | zombie collector waiting for pid 224281
[2024-06-24 14:26:41] 2024-06-24 18:26:22,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 14:26:41] 2024-06-24 18:26:23,136 | INFO     | collected zombie processes
[2024-06-24 14:26:41] 2024-06-24 18:26:23,137 | INFO     | will now attempt to kill all subprocesses of pid=224281
[2024-06-24 14:26:41] 2024-06-24 18:26:23,771 | INFO     | process IDs to be killed: [224281] (in reverse order)
[2024-06-24 14:26:41] 2024-06-24 18:26:24,333 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 14:26:41] 2024-06-24 18:26:24,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 14:26:41] 2024-06-24 18:26:24,361 | INFO     | did not find any defunct processes belonging to 224281
[2024-06-24 14:26:41] 2024-06-24 18:26:24,389 | INFO     | did not find any defunct processes belonging to 224281
[2024-06-24 14:26:41] 2024-06-24 18:26:24,390 | INFO     | ready for new job
[2024-06-24 14:26:41] 2024-06-24 18:26:24,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 14:26:41] 2024-06-24 18:26:24,398 | INFO     | *************************************
[2024-06-24 14:26:41] 2024-06-24 18:26:24,399 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 14:26:41] 2024-06-24 18:26:24,399 | INFO     | *************************************
[2024-06-24 14:26:41] 2024-06-24 18:26:24,399 | INFO     | 
[2024-06-24 14:26:41] 2024-06-24 18:26:24,410 | INFO     | architecture information:
[2024-06-24 14:26:41] 2024-06-24 18:26:24,411 | INFO     | executing command: cat /etc/os-release
[2024-06-24 14:26:41] 2024-06-24 18:26:24,532 | INFO     | cat /etc/os-release:
[2024-06-24 14:26:41] NAME="CentOS Linux"
[2024-06-24 14:26:41] VERSION="7 (Core)"
[2024-06-24 14:26:41] ID="centos"
[2024-06-24 14:26:41] ID_LIKE="rhel fedora"
[2024-06-24 14:26:41] VERSION_ID="7"
[2024-06-24 14:26:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 14:26:41] ANSI_COLOR="0;31"
[2024-06-24 14:26:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 14:26:41] HOME_URL="https://www.centos.org/"
[2024-06-24 14:26:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 14:26:41] 
[2024-06-24 14:26:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 14:26:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 14:26:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 14:26:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 14:26:41] 
[2024-06-24 14:26:41] 2024-06-24 18:26:24,532 | INFO     | *************************************
[2024-06-24 14:26:41] 2024-06-24 18:26:25,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-24 14:26:41] 2024-06-24 18:26:25,071 | INFO     | sufficient remaining disk space (101988696064 B)
[2024-06-24 14:26:41] 2024-06-24 18:26:25,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 14:26:41] 2024-06-24 18:26:25,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 14:26:41] 2024-06-24 18:26:25,073 | INFO     | aborting loop
[2024-06-24 14:26:41] 2024-06-24 18:26:25,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 14:26:41] 2024-06-24 18:26:25,161 | INFO     | all payload control threads have been joined
[2024-06-24 14:26:41] 2024-06-24 18:26:25,488 | INFO     | all data control threads have been joined
[2024-06-24 14:26:41] 2024-06-24 18:26:25,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 14:26:41] 2024-06-24 18:26:26,028 | INFO     | all job control threads have been joined
[2024-06-24 14:26:41] 2024-06-24 18:26:26,078 | INFO     | [job] retrieve thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,082 | INFO     | [job] job monitor thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,167 | INFO     | [payload] control thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,497 | INFO     | [data] control thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,645 | INFO     | [payload] validate_post thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,688 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,786 | INFO     | [job] validate thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,889 | INFO     | [job] queue monitor thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:26,907 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,034 | INFO     | [job] control thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,066 | INFO     | [payload] failed_post thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,080 | INFO     | [data] copytool_out thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,172 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,318 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:27,391 | INFO     | [data] copytool_in thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:28,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 14:26:41] 2024-06-24 18:26:32,475 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 14:26:41] 2024-06-24 18:26:33,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303392618304)>', '<ExcThread(monitor, started 140302782277376)>']
[2024-06-24 14:26:41] 2024-06-24 18:26:34,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 14:26:41] 2024-06-24 18:26:34,134 | INFO     | [monitor] control thread has ended
[2024-06-24 14:26:41] 2024-06-24 18:26:38,669 | INFO     | all workflow threads have been joined
[2024-06-24 14:26:41] 2024-06-24 18:26:38,669 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 14:26:41] 2024-06-24 18:26:38,669 | INFO     | traces error code: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:38,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 14:26:41] 2024-06-24 18:26:39,212 [wrapper] ==== pilot stdout END ====
[2024-06-24 14:26:41] 2024-06-24 18:26:39,250 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 14:26:41] 2024-06-24 18:26:39,275 [wrapper] pilotpid: 177066
[2024-06-24 14:26:41] 2024-06-24 18:26:39,280 [wrapper] Pilot exit status: 0
[2024-06-24 14:26:41] 2024-06-24 18:26:39,438 [wrapper] pandaids: 6242537210
[2024-06-24 14:26:41] 2024-06-24 18:26:39,748 [wrapper] cleanup supervisor_pilot 122034 177067
[2024-06-24 14:26:41] 2024-06-24 18:26:39,796 [wrapper] Test setup, not cleaning
[2024-06-24 14:26:41] 2024-06-24 18:26:39,839 [wrapper] ==== wrapper stdout END ====
[2024-06-24 14:26:41] 2024-06-24 18:26:39,869 [wrapper] ==== wrapper stderr END ====
[2024-06-24 14:26:41] 2024-06-24 18:26:39,961 [wrapper] apfmon messages muted
[2024-06-24 14:26:41]  *** Error codes and diagnostics ***
[2024-06-24 14:26:41]     "exeErrorCode": 0,
[2024-06-24 14:26:41]     "exeErrorDiag": "",
[2024-06-24 14:26:41]     "pilotErrorCode": 0,
[2024-06-24 14:26:41]     "pilotErrorDiag": "",
[2024-06-24 14:26:41]  *** Listing of results directory ***
[2024-06-24 14:26:41] total 962164
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas    469766 Jun 23 22:53 pilot3.tar.gz
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas      5654 Jun 23 23:33 queuedata.json
[2024-06-24 14:26:41] -rwx------ 1 boincer umatlas     32308 Jun 23 23:36 runpilot2-wrapper.sh
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas       100 Jun 23 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 14:26:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun 23 23:38 run_atlas
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas       105 Jun 23 23:38 job.xml
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas 615198162 Jun 23 23:38 EVNT.38776190._000272.pool.root.1
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 23:38 start_atlas.sh
[2024-06-24 14:26:41] drwxrwx--x 2 boincer umatlas      4096 Jun 23 23:38 shared
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas    482542 Jun 23 23:38 input.tar.gz
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas         0 Jun 23 23:38 boinc_lockfile
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas      2653 Jun 23 23:38 pandaJob.out
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas       424 Jun 23 23:38 setup.sh.local
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas   1024670 Jun 23 23:40 agis_schedconf.cvmfs.json
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas   1321363 Jun 23 23:40 cric_ddmendpoints.json
[2024-06-24 14:26:41] drwx------ 4 boincer umatlas      4096 Jun 23 23:40 pilot3
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas      6302 Jun 24 14:22 init_data.xml
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas 350376133 Jun 24 14:22 HITS.38921001._065333.pool.root.1
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas       533 Jun 24 14:22 boinc_task_state.xml
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas      1067 Jun 24 14:25 memory_monitor_summary.json
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas         0 Jun 24 14:25 agis_ddmendpoints.agis.ALL.json
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas    867676 Jun 24 14:25 log.38921001._065333.job.log.tgz.1
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas        95 Jun 24 14:25 pilot_heartbeat.json
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas      7786 Jun 24 14:26 heartbeat.json
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas      8192 Jun 24 14:26 boinc_mmap_file
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas        29 Jun 24 14:26 wrapper_checkpoint.txt
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas      4335 Jun 24 14:26 pilotlog.txt
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas   7205679 Jun 24 14:26 log.38921001._065333.job.log.1
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas       357 Jun 24 14:26 output.list
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas       620 Jun 24 14:26 runtime_log
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas   8089600 Jun 24 14:26 result.tar.gz
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas       655 Jun 24 14:26 TigLDmsgpf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmAHoKDmkzAFbm.diag
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas     11010 Jun 24 14:26 runtime_log.err
[2024-06-24 14:26:41] -rw-r--r-- 1 boincer umatlas     21676 Jun 24 14:26 stderr.txt
[2024-06-24 14:26:41] HITS file was successfully produced:
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas 350376133 Jun 24 14:22 shared/HITS.pool.root.1
[2024-06-24 14:26:41]  *** Contents of shared directory: ***
[2024-06-24 14:26:41] total 951348
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas 615198162 Jun 23 23:38 ATLAS.root_0
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 23:38 start_atlas.sh
[2024-06-24 14:26:41] -rw-r--r-- 2 boincer umatlas    482542 Jun 23 23:38 input.tar.gz
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas 350376133 Jun 24 14:22 HITS.pool.root.1
[2024-06-24 14:26:41] -rw------- 1 boincer umatlas   8089600 Jun 24 14:26 result.tar.gz
14:26:43 (157945): run_atlas exited; CPU time 146260.336053
14:26:43 (157945): called boinc_finish(0)

</stderr_txt>
]]>

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