Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:31 (10261): wrapper (7.7.26015): starting
20:13:31 (10261): wrapper: running run_atlas (--nthreads 8)
[2024-06-23 20:13:31] Arguments: --nthreads 8
[2024-06-23 20:13:31] Threads: 8
[2024-06-23 20:13:31] Checking for CVMFS
[2024-06-23 20:13:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 20:13:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 20:13:33] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 20:13:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 20:13:34] 2.11.2.0 56809 18837 155980 134218 2 87 17312524 18432001 18362 130560 0 21013375 99.812 6269712 53808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-23 20:13:34] CVMFS is ok
[2024-06-23 20:13:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 20:13:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 20:13:34] Further information can be found at the LHC@home message board.
[2024-06-23 20:13:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 20:13:34] Checking for apptainer binary...
[2024-06-23 20:13:34] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 20:13:34] Running /usr/bin/apptainer --version
[2024-06-23 20:13:34] apptainer version 1.3.1-1.el7
[2024-06-23 20:13:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 20:13:46] c-212-19.aglt2.org
[2024-06-23 20:13:46] apptainer works
[2024-06-23 20:13:46] Set ATHENA_PROC_NUMBER=8
[2024-06-23 20:13:46] Set ATHENA_CORE_NUMBER=8
[2024-06-23 20:13:46] Starting ATLAS job with PandaID=6242448734
[2024-06-23 20:13:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 09:26:43]  *** The last 200 lines of the pilot log: ***
[2024-06-24 09:26:43] 2024-06-24 13:26:25,052 | INFO     | intersect: -13481091929.683628
[2024-06-24 09:26:43] 2024-06-24 13:26:25,053 | INFO     | chi2: 10.281124029550647
[2024-06-24 09:26:43] 2024-06-24 13:26:25,053 | INFO     | current chi2=10.281124029550647 (change=6.8437690187374125 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,053 | INFO     | right removable region: 766
[2024-06-24 09:26:43] 2024-06-24 13:26:25,054 | INFO     | model: linear, x: [1719188783.0, 1719188844.0, 1719188905.0, 1719188966.0, 1719189027.0, 1719189088.0, 1719189149.0, 1719189210.0, 1719189271.0, 1719189332.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,054 | INFO     | sum of square deviations: 139914353946.79288
[2024-06-24 09:26:43] 2024-06-24 13:26:25,064 | INFO     | sum of deviations: 782389776617.839
[2024-06-24 09:26:43] 2024-06-24 13:26:25,064 | INFO     | mean x: 1719212146.0899608
[2024-06-24 09:26:43] 2024-06-24 13:26:25,064 | INFO     | mean y: 2495256.2777053453
[2024-06-24 09:26:43] 2024-06-24 13:26:25,064 | INFO     | -- intersect: -9611200329.591326
[2024-06-24 09:26:43] 2024-06-24 13:26:25,064 | INFO     | intersect: -9611200329.591326
[2024-06-24 09:26:43] 2024-06-24 13:26:25,065 | INFO     | chi2: 6.466292626651843
[2024-06-24 09:26:43] 2024-06-24 13:26:25,065 | INFO     | current chi2=6.466292626651843 (change=41.409572748132476 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,066 | INFO     | model: linear, x: [1719189088.0, 1719189149.0, 1719189210.0, 1719189271.0, 1719189332.0, 1719189393.0, 1719189454.0, 1719189515.0, 1719189576.0, 1719189637.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,066 | INFO     | sum of square deviations: 137195854024.2521
[2024-06-24 09:26:43] 2024-06-24 13:26:25,076 | INFO     | sum of deviations: 583254718092.031
[2024-06-24 09:26:43] 2024-06-24 13:26:25,076 | INFO     | mean x: 1719212298.5905511
[2024-06-24 09:26:43] 2024-06-24 13:26:25,076 | INFO     | mean y: 2506424.282152231
[2024-06-24 09:26:43] 2024-06-24 13:26:25,076 | INFO     | -- intersect: -7306305432.2155695
[2024-06-24 09:26:43] 2024-06-24 13:26:25,076 | INFO     | intersect: -7306305432.2155695
[2024-06-24 09:26:43] 2024-06-24 13:26:25,077 | INFO     | chi2: 4.0983818491250315
[2024-06-24 09:26:43] 2024-06-24 13:26:25,077 | INFO     | current chi2=4.0983818491250315 (change=36.61929507747754 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,077 | INFO     | model: linear, x: [1719189393.0, 1719189454.0, 1719189515.0, 1719189576.0, 1719189637.0, 1719189698.0, 1719189759.0, 1719189820.0, 1719189881.0, 1719189942.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,078 | INFO     | sum of square deviations: 134512796626.71013
[2024-06-24 09:26:43] 2024-06-24 13:26:25,087 | INFO     | sum of deviations: 415334568116.5439
[2024-06-24 09:26:43] 2024-06-24 13:26:25,087 | INFO     | mean x: 1719212451.0911493
[2024-06-24 09:26:43] 2024-06-24 13:26:25,088 | INFO     | mean y: 2515968.00660502
[2024-06-24 09:26:43] 2024-06-24 13:26:25,088 | INFO     | -- intersect: -5305888724.939457
[2024-06-24 09:26:43] 2024-06-24 13:26:25,088 | INFO     | intersect: -5305888724.939457
[2024-06-24 09:26:43] 2024-06-24 13:26:25,088 | INFO     | chi2: 2.4632990817903546
[2024-06-24 09:26:43] 2024-06-24 13:26:25,089 | INFO     | current chi2=2.4632990817903546 (change=39.89581321427511 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,089 | INFO     | model: linear, x: [1719189698.0, 1719189759.0, 1719189820.0, 1719189881.0, 1719189942.0, 1719190003.0, 1719190064.0, 1719190125.0, 1719190186.0, 1719190247.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,089 | INFO     | sum of square deviations: 131864949191.66888
[2024-06-24 09:26:43] 2024-06-24 13:26:25,099 | INFO     | sum of deviations: 268383653443.80057
[2024-06-24 09:26:43] 2024-06-24 13:26:25,099 | INFO     | mean x: 1719212603.5917554
[2024-06-24 09:26:43] 2024-06-24 13:26:25,099 | INFO     | mean y: 2524426.7420212766
[2024-06-24 09:26:43] 2024-06-24 13:26:25,099 | INFO     | -- intersect: -3496574935.347864
[2024-06-24 09:26:43] 2024-06-24 13:26:25,099 | INFO     | intersect: -3496574935.347864
[2024-06-24 09:26:43] 2024-06-24 13:26:25,100 | INFO     | chi2: 1.165044297779752
[2024-06-24 09:26:43] 2024-06-24 13:26:25,100 | INFO     | current chi2=1.165044297779752 (change=52.70390402886099 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,101 | INFO     | model: linear, x: [1719190003.0, 1719190064.0, 1719190125.0, 1719190186.0, 1719190247.0, 1719190309.0, 1719190369.0, 1719190430.0, 1719190492.0, 1719190552.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,101 | INFO     | sum of square deviations: 129252079156.62643
[2024-06-24 09:26:43] 2024-06-24 13:26:25,110 | INFO     | sum of deviations: 215028126785.62653
[2024-06-24 09:26:43] 2024-06-24 13:26:25,110 | INFO     | mean x: 1719212756.0923696
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | mean y: 2527536.7590361447
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | -- intersect: -2857612902.765522
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | intersect: -2857612902.765522
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | chi2: 0.9974687080070549
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | current chi2=0.9974687080070549 (change=14.383623875250853 %)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,111 | INFO     | left removable region: 50
[2024-06-24 09:26:43] 2024-06-24 13:26:25,112 | INFO     | model: linear, x: [1719191528.0, 1719191589.0, 1719191650.0, 1719191711.0, 1719191772.0, 1719191833.0, 1719191894.0, 1719191955.0, 1719192016.0, 1719192077.0, 1719
[2024-06-24 09:26:43] 2024-06-24 13:26:25,112 | INFO     | sum of square deviations: 113818978320.91646
[2024-06-24 09:26:43] 2024-06-24 13:26:25,121 | INFO     | sum of deviations: 138628255649.88293
[2024-06-24 09:26:43] 2024-06-24 13:26:25,121 | INFO     | mean x: 1719213335.5921788
[2024-06-24 09:26:43] 2024-06-24 13:26:25,124 | INFO     | mean y: 2537943.479050279
[2024-06-24 09:26:43] 2024-06-24 13:26:25,124 | INFO     | -- intersect: -2091414658.4427195
[2024-06-24 09:26:43] 2024-06-24 13:26:25,124 | INFO     | intersect: -2091414658.4427195
[2024-06-24 09:26:43] 2024-06-24 13:26:25,125 | INFO     | chi2: 0.017870307869033687
[2024-06-24 09:26:43] 2024-06-24 13:26:25,125 | INFO     | -- intersect: -2091414658.4427195
[2024-06-24 09:26:43] 2024-06-24 13:26:25,125 | INFO     | current memory leak: 1.22 B/s (using 716 data points, chi2=0.02)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | ..............................
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | . Timing measurements:
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | . get job = 0 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | . initial setup = 8 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | . payload setup = 93 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,126 | INFO     | . stage-in = 0 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,127 | INFO     | . payload execution = 47152 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,127 | INFO     | . stage-out = 2 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,127 | INFO     | . log creation = 0 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,127 | INFO     | ..............................
[2024-06-24 09:26:43] 2024-06-24 13:26:25,262 | INFO     | 
[2024-06-24 09:26:43] 2024-06-24 13:26:25,262 | INFO     | job summary report
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | --------------------------------------------------
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | PanDA job id: 6242448734
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | task id: 38921013
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | errors: (none)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | pilot state: finished 
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | transexitcode: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | exeerrorcode: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | exeerrordiag: 
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | exitcode: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | exitmsg: OK
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | cpuconsumptiontime: 138978 s
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | nevents: 400
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | neventsw: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | pid: 69209
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | pgrp: 69209
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | corecount: 8
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | event service: False
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | sizes: {0: 2386908, 1: 2386936, 2: 2387135, 13: 2387135, 24: 2387191, 35: 2387219, 46: 2387375, 57: 2387609, 68: 2387637, 47250: 2432713, 47253: 2442009, 47290: 24
[2024-06-24 09:26:43] 2024-06-24 13:26:25,263 | INFO     | --------------------------------------------------
[2024-06-24 09:26:43] 2024-06-24 13:26:25,264 | INFO     | 
[2024-06-24 09:26:43] 2024-06-24 13:26:25,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-24 09:26:43] 2024-06-24 13:26:25,463 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | job 6242448734 has completed (purged errors)
[2024-06-24 09:26:43] 2024-06-24 13:26:25,469 | INFO     | overall cleanup function is called
[2024-06-24 09:26:43] 2024-06-24 13:26:26,494 | INFO     | --- collectZombieJob: --- 10, [69209]
[2024-06-24 09:26:43] 2024-06-24 13:26:26,494 | INFO     | zombie collector waiting for pid 69209
[2024-06-24 09:26:43] 2024-06-24 13:26:26,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 09:26:43] 2024-06-24 13:26:27,500 | INFO     | collected zombie processes
[2024-06-24 09:26:43] 2024-06-24 13:26:27,500 | INFO     | will now attempt to kill all subprocesses of pid=69209
[2024-06-24 09:26:43] 2024-06-24 13:26:27,779 | INFO     | process IDs to be killed: [69209] (in reverse order)
[2024-06-24 09:26:43] 2024-06-24 13:26:27,916 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 09:26:43] 2024-06-24 13:26:27,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 09:26:43] 2024-06-24 13:26:27,927 | INFO     | did not find any defunct processes belonging to 69209
[2024-06-24 09:26:43] 2024-06-24 13:26:27,936 | INFO     | did not find any defunct processes belonging to 69209
[2024-06-24 09:26:43] 2024-06-24 13:26:27,936 | INFO     | ready for new job
[2024-06-24 09:26:43] 2024-06-24 13:26:27,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 09:26:43] 2024-06-24 13:26:27,939 | INFO     | *************************************
[2024-06-24 09:26:43] 2024-06-24 13:26:27,939 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 09:26:43] 2024-06-24 13:26:27,939 | INFO     | *************************************
[2024-06-24 09:26:43] 2024-06-24 13:26:27,939 | INFO     | 
[2024-06-24 09:26:43] 2024-06-24 13:26:27,943 | INFO     | architecture information:
[2024-06-24 09:26:43] 2024-06-24 13:26:27,944 | INFO     | executing command: cat /etc/os-release
[2024-06-24 09:26:43] 2024-06-24 13:26:27,957 | INFO     | cat /etc/os-release:
[2024-06-24 09:26:43] NAME="CentOS Linux"
[2024-06-24 09:26:43] VERSION="7 (Core)"
[2024-06-24 09:26:43] ID="centos"
[2024-06-24 09:26:43] ID_LIKE="rhel fedora"
[2024-06-24 09:26:43] VERSION_ID="7"
[2024-06-24 09:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 09:26:43] ANSI_COLOR="0;31"
[2024-06-24 09:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 09:26:43] HOME_URL="https://www.centos.org/"
[2024-06-24 09:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 09:26:43] 
[2024-06-24 09:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 09:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 09:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 09:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 09:26:43] 
[2024-06-24 09:26:43] 2024-06-24 13:26:27,958 | INFO     | *************************************
[2024-06-24 09:26:43] 2024-06-24 13:26:28,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-24 09:26:43] 2024-06-24 13:26:28,585 | INFO     | sufficient remaining disk space (104562950144 B)
[2024-06-24 09:26:43] 2024-06-24 13:26:28,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 09:26:43] 2024-06-24 13:26:28,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 09:26:43] 2024-06-24 13:26:28,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 09:26:43] 2024-06-24 13:26:28,651 | INFO     | aborting loop
[2024-06-24 09:26:43] 2024-06-24 13:26:28,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 09:26:43] 2024-06-24 13:26:29,059 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 09:26:43] 2024-06-24 13:26:29,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 09:26:43] 2024-06-24 13:26:29,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 09:26:43] 2024-06-24 13:26:29,591 | INFO     | [job] retrieve thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:29,618 | INFO     | all data control threads have been joined
[2024-06-24 09:26:43] 2024-06-24 13:26:29,655 | INFO     | [job] job monitor thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:29,844 | INFO     | all payload control threads have been joined
[2024-06-24 09:26:43] 2024-06-24 13:26:30,023 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,054 | INFO     | [payload] validate_post thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,124 | INFO     | [data] copytool_in thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,158 | INFO     | all job control threads have been joined
[2024-06-24 09:26:43] 2024-06-24 13:26:30,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 09:26:43] 2024-06-24 13:26:30,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 09:26:43] 2024-06-24 13:26:30,414 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,624 | INFO     | [data] control thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,688 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,800 | INFO     | [data] copytool_out thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,850 | INFO     | [payload] control thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,924 | INFO     | [job] validate thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:30,938 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:31,160 | INFO     | [payload] failed_post thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:31,164 | INFO     | [job] control thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:31,284 | INFO     | [job] queue monitor thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:34,358 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 09:26:43] 2024-06-24 13:26:35,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652445345600)>', '<ExcThread(monitor, started 140652142630656)>']
[2024-06-24 09:26:43] 2024-06-24 13:26:36,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 09:26:43] 2024-06-24 13:26:36,104 | INFO     | [monitor] control thread has ended
[2024-06-24 09:26:43] 2024-06-24 13:26:40,208 | INFO     | all workflow threads have been joined
[2024-06-24 09:26:43] 2024-06-24 13:26:40,209 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 09:26:43] 2024-06-24 13:26:40,209 | INFO     | traces error code: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:40,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 09:26:43] 2024-06-24 13:26:41,262 [wrapper] ==== pilot stdout END ====
[2024-06-24 09:26:43] 2024-06-24 13:26:41,294 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 09:26:43] 2024-06-24 13:26:41,338 [wrapper] pilotpid: 29525
[2024-06-24 09:26:43] 2024-06-24 13:26:41,409 [wrapper] Pilot exit status: 0
[2024-06-24 09:26:43] 2024-06-24 13:26:41,664 [wrapper] pandaids: 6242448734
[2024-06-24 09:26:43] 2024-06-24 13:26:42,154 [wrapper] cleanup supervisor_pilot  3173 29526
[2024-06-24 09:26:43] 2024-06-24 13:26:42,179 [wrapper] Test setup, not cleaning
[2024-06-24 09:26:43] 2024-06-24 13:26:42,193 [wrapper] ==== wrapper stdout END ====
[2024-06-24 09:26:43] 2024-06-24 13:26:42,224 [wrapper] ==== wrapper stderr END ====
[2024-06-24 09:26:43] 2024-06-24 13:26:42,298 [wrapper] apfmon messages muted
[2024-06-24 09:26:43]  *** Error codes and diagnostics ***
[2024-06-24 09:26:43]     "exeErrorCode": 0,
[2024-06-24 09:26:43]     "exeErrorDiag": "",
[2024-06-24 09:26:43]     "pilotErrorCode": 0,
[2024-06-24 09:26:43]     "pilotErrorDiag": "",
[2024-06-24 09:26:43]  *** Listing of results directory ***
[2024-06-24 09:26:43] total 876696
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas    469766 Jun 23 20:03 pilot3.tar.gz
[2024-06-24 09:26:43] -rwx------ 1 boincer umatlas     32308 Jun 23 20:12 runpilot2-wrapper.sh
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas      5654 Jun 23 20:12 queuedata.json
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas       100 Jun 23 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 09:26:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun 23 20:13 run_atlas
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas       105 Jun 23 20:13 job.xml
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas 542045589 Jun 23 20:13 EVNT.38776210._000286.pool.root.1
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 20:13 start_atlas.sh
[2024-06-24 09:26:43] drwxrwx--x 2 boincer umatlas      4096 Jun 23 20:13 shared
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas    482524 Jun 23 20:13 input.tar.gz
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas         0 Jun 23 20:13 boinc_lockfile
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas      2645 Jun 23 20:13 pandaJob.out
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas       424 Jun 23 20:13 setup.sh.local
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas   1024694 Jun 23 20:16 agis_schedconf.cvmfs.json
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas   1321363 Jun 23 20:16 cric_ddmendpoints.json
[2024-06-24 09:26:43] drwx------ 4 boincer umatlas      4096 Jun 23 20:16 pilot3
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas      6304 Jun 24 09:18 init_data.xml
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas       533 Jun 24 09:24 boinc_task_state.xml
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas 338736503 Jun 24 09:24 HITS.38921013._054782.pool.root.1
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas      1090 Jun 24 09:25 memory_monitor_summary.json
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas         0 Jun 24 09:25 agis_ddmendpoints.agis.ALL.json
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas    784094 Jun 24 09:25 log.38921013._054782.job.log.tgz.1
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas        95 Jun 24 09:26 pilot_heartbeat.json
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas      7762 Jun 24 09:26 heartbeat.json
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas      8192 Jun 24 09:26 boinc_mmap_file
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas        29 Jun 24 09:26 wrapper_checkpoint.txt
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas      4212 Jun 24 09:26 pilotlog.txt
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas   5922486 Jun 24 09:26 log.38921013._054782.job.log.1
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas       357 Jun 24 09:26 output.list
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas       620 Jun 24 09:26 runtime_log
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas   6727680 Jun 24 09:26 result.tar.gz
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas     11000 Jun 24 09:26 runtime_log.err
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas       655 Jun 24 09:26 MprNDmrUmf5n7Olcko1bjSoqABFKDmABFKDmOtvXDm6prKDmbJ03ym.diag
[2024-06-24 09:26:43] -rw-r--r-- 1 boincer umatlas     21641 Jun 24 09:26 stderr.txt
[2024-06-24 09:26:43] HITS file was successfully produced:
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas 338736503 Jun 24 09:24 shared/HITS.pool.root.1
[2024-06-24 09:26:43]  *** Contents of shared directory: ***
[2024-06-24 09:26:43] total 867216
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas 542045589 Jun 23 20:13 ATLAS.root_0
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 20:13 start_atlas.sh
[2024-06-24 09:26:43] -rw-r--r-- 2 boincer umatlas    482524 Jun 23 20:13 input.tar.gz
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas 338736503 Jun 24 09:24 HITS.pool.root.1
[2024-06-24 09:26:43] -rw------- 1 boincer umatlas   6727680 Jun 24 09:26 result.tar.gz
09:26:45 (10261): run_atlas exited; CPU time 136177.513841
09:26:45 (10261): called boinc_finish(0)

</stderr_txt>
]]>

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