Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:41 (757254): wrapper (7.7.26015): starting
13:43:41 (757254): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 13:43:41] Arguments: --nthreads 12
[2024-06-23 13:43:41] Threads: 12
[2024-06-23 13:43:41] Checking for CVMFS
[2024-06-23 13:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 13:43:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 13:43:45] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 13:43:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 13:43:45] 2.11.2.0 757455 0 29668 134209 3 1 3602605 4096001 0 65024 0 0 0.000 1141 3010 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-23 13:43:45] CVMFS is ok
[2024-06-23 13:43:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 13:43:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 13:43:45] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-23 13:43:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-23 13:43:45] Further information can be found at the LHC@home message board.
[2024-06-23 13:43:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 13:43:45] Checking for apptainer binary...
[2024-06-23 13:43:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 13:43:45] Running /usr/bin/apptainer --version
[2024-06-23 13:43:45] /usr/bin/apptainer: symbol lookup error: /usr/bin/apptainer: undefined symbol: seccomp_notify_respond
[2024-06-23 13:43:45] apptainer seems to be installed but not working
[2024-06-23 13:43:45] Will use version from CVMFS
[2024-06-23 13:43:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 13:43:46] sarnet8.local
[2024-06-23 13:43:46] apptainer works
[2024-06-23 13:43:46] Set ATHENA_PROC_NUMBER=12
[2024-06-23 13:43:46] Set ATHENA_CORE_NUMBER=12
[2024-06-23 13:43:46] Starting ATLAS job with PandaID=6242275512
[2024-06-23 13:43:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 16:41:44]  *** The last 200 lines of the pilot log: ***
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | current chi2=1.197275592822601 (change=63.98000451881818 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | model: linear, x: [1719165287.0, 1719165348.0, 1719165409.0, 1719165470.0, 1719165531.0, 1719165592.0, 1719165653.0, 1719165714.0, 1719165775.0, 1719165836.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | sum of square deviations: 1367709365.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | sum of deviations: 10039617564.500002
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | mean x: 1719170258.5
[2024-06-23 16:41:44] 2024-06-23 20:41:22,942 | INFO     | mean y: 2809857.798780488
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | -- intersect: -12616692768.479288
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | intersect: -12616692768.479288
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | chi2: 0.0889676966186303
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | current chi2=0.0889676966186303 (change=92.56915474165082 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | model: linear, x: [1719165592.0, 1719165653.0, 1719165714.0, 1719165775.0, 1719165836.0, 1719165897.0, 1719165958.0, 1719166019.0, 1719166080.0, 1719166141.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,943 | INFO     | sum of square deviations: 1246386160.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | sum of deviations: 3822424760.999999
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | mean x: 1719170411.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | mean y: 2817621.540880503
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | -- intersect: -5269544795.725488
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | intersect: -5269544795.725488
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | chi2: 0.04336275399761784
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | current chi2=0.04336275399761784 (change=51.26011390010804 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | model: linear, x: [1719165897.0, 1719165958.0, 1719166019.0, 1719166080.0, 1719166141.0, 1719166202.0, 1719166263.0, 1719166324.0, 1719166385.0, 1719166446.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,944 | INFO     | sum of square deviations: 1132458442.5
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | sum of deviations: 6789035016.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | mean x: 1719170563.5
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | mean y: 2813631.4025974027
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | -- intersect: -10303532911.70947
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | intersect: -10303532911.70947
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | chi2: 0.0019469544549180547
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | current chi2=0.0019469544549180547 (change=95.51007656242264 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | model: linear, x: [1719166202.0, 1719166263.0, 1719166324.0, 1719166385.0, 1719166446.0, 1719166507.0, 1719166568.0, 1719166629.0, 1719166690.0, 1719166751.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,945 | INFO     | sum of square deviations: 1025693650.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | sum of deviations: 5481846740.000001
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | mean x: 1719170716.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | mean y: 2815496.6577181206
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | -- intersect: -9185337696.070019
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | intersect: -9185337696.070019
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | chi2: 0.0013444788334863373
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | current chi2=0.0013444788334863373 (change=30.944515415337488 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | model: linear, x: [1719166507.0, 1719166568.0, 1719166629.0, 1719166690.0, 1719166751.0, 1719166812.0, 1719166873.0, 1719166934.0, 1719166995.0, 1719167056.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,946 | INFO     | sum of square deviations: 925859220.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | sum of deviations: 4631467334.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | mean x: 1719170868.5
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | mean y: 2816794.0833333335
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | -- intersect: -8597069178.885818
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | intersect: -8597069178.885818
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | chi2: 0.0011957155438824456
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | current chi2=0.0011957155438824456 (change=11.064755048477563 %)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | left removable region: 60
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | model: linear, x: [1719168337.0, 1719168398.0, 1719168459.0, 1719168520.0, 1719168581.0, 1719168642.0, 1719168703.0, 1719168764.0, 1719168825.0, 1719168886.0, 1719
[2024-06-23 16:41:44] 2024-06-23 20:41:22,947 | INFO     | sum of square deviations: 390582207.0
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | sum of deviations: 1106888218.4999998
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | mean x: 1719171600.5
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | mean y: 2822851.064814815
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | -- intersect: -4869213703.773022
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | intersect: -4869213703.773022
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | chi2: 0.0003407518225441532
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | -- intersect: -4869213703.773022
[2024-06-23 16:41:44] 2024-06-23 20:41:22,948 | INFO     | current memory leak: 2.83 B/s (using 108 data points, chi2=0.00)
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | ..............................
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . Timing measurements:
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . get job = 0 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . initial setup = 2 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . payload setup = 3 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . stage-in = 0 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . payload execution = 10595 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . stage-out = 0 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | . log creation = 0 s
[2024-06-23 16:41:44] 2024-06-23 20:41:22,949 | INFO     | ..............................
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | 
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | job summary report
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | --------------------------------------------------
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | PanDA job id: 6242275512
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | task id: 38921013
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | errors: (none)
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | pilot state: finished 
[2024-06-23 16:41:44] 2024-06-23 20:41:23,436 | INFO     | transexitcode: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | exeerrorcode: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | exeerrordiag: 
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | exitcode: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | exitmsg: OK
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | cpuconsumptiontime: 113182 s
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | nevents: 400
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | neventsw: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | pid: 768478
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | pgrp: 768478
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | corecount: 12
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | event service: False
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | sizes: {0: 2387083, 1: 2387083, 3: 2387317, 11: 2387345, 10602: 2415860, 10603: 2424820, 10606: 2425004, 10613: 2425174}
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | --------------------------------------------------
[2024-06-23 16:41:44] 2024-06-23 20:41:23,437 | INFO     | 
[2024-06-23 16:41:44] 2024-06-23 20:41:23,438 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 16:41:44] 2024-06-23 20:41:23,466 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | job 6242275512 has completed (purged errors)
[2024-06-23 16:41:44] 2024-06-23 20:41:23,468 | INFO     | overall cleanup function is called
[2024-06-23 16:41:44] 2024-06-23 20:41:24,476 | INFO     | --- collectZombieJob: --- 10, [768478]
[2024-06-23 16:41:44] 2024-06-23 20:41:24,476 | INFO     | zombie collector waiting for pid 768478
[2024-06-23 16:41:44] 2024-06-23 20:41:24,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 16:41:44] 2024-06-23 20:41:25,481 | INFO     | collected zombie processes
[2024-06-23 16:41:44] 2024-06-23 20:41:25,482 | INFO     | will now attempt to kill all subprocesses of pid=768478
[2024-06-23 16:41:44] 2024-06-23 20:41:25,541 | INFO     | process IDs to be killed: [768478] (in reverse order)
[2024-06-23 16:41:44] 2024-06-23 20:41:25,572 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 16:41:44] 2024-06-23 20:41:25,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 16:41:44] 2024-06-23 20:41:25,574 | INFO     | did not find any defunct processes belonging to 768478
[2024-06-23 16:41:44] 2024-06-23 20:41:25,575 | INFO     | did not find any defunct processes belonging to 768478
[2024-06-23 16:41:44] 2024-06-23 20:41:25,575 | INFO     | ready for new job
[2024-06-23 16:41:44] 2024-06-23 20:41:25,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 16:41:44] 2024-06-23 20:41:25,576 | INFO     | *************************************
[2024-06-23 16:41:44] 2024-06-23 20:41:25,576 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 16:41:44] 2024-06-23 20:41:25,576 | INFO     | *************************************
[2024-06-23 16:41:44] 2024-06-23 20:41:25,577 | INFO     | 
[2024-06-23 16:41:44] 2024-06-23 20:41:25,577 | INFO     | pilot is running in a VM
[2024-06-23 16:41:44] 2024-06-23 20:41:25,578 | INFO     | architecture information:
[2024-06-23 16:41:44] 2024-06-23 20:41:25,578 | INFO     | executing command: cat /etc/os-release
[2024-06-23 16:41:44] 2024-06-23 20:41:25,593 | INFO     | cat /etc/os-release:
[2024-06-23 16:41:44] NAME="CentOS Linux"
[2024-06-23 16:41:44] VERSION="7 (Core)"
[2024-06-23 16:41:44] ID="centos"
[2024-06-23 16:41:44] ID_LIKE="rhel fedora"
[2024-06-23 16:41:44] VERSION_ID="7"
[2024-06-23 16:41:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 16:41:44] ANSI_COLOR="0;31"
[2024-06-23 16:41:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 16:41:44] HOME_URL="https://www.centos.org/"
[2024-06-23 16:41:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 16:41:44] 
[2024-06-23 16:41:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 16:41:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 16:41:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 16:41:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 16:41:44] 
[2024-06-23 16:41:44] 2024-06-23 20:41:25,594 | INFO     | *************************************
[2024-06-23 16:41:44] 2024-06-23 20:41:26,097 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 16:41:44] 2024-06-23 20:41:26,113 | INFO     | sufficient remaining disk space (30098325504 B)
[2024-06-23 16:41:44] 2024-06-23 20:41:26,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 16:41:44] 2024-06-23 20:41:26,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | INFO     | aborting loop
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 16:41:44] 2024-06-23 20:41:26,114 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 16:41:44] 2024-06-23 20:41:26,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 16:41:44] 2024-06-23 20:41:26,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 16:41:44] 2024-06-23 20:41:26,954 | INFO     | all payload control threads have been joined
[2024-06-23 16:41:44] 2024-06-23 20:41:26,959 | INFO     | all data control threads have been joined
[2024-06-23 16:41:44] 2024-06-23 20:41:27,119 | INFO     | [job] retrieve thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,119 | INFO     | [job] job monitor thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,302 | INFO     | [job] validate thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,421 | INFO     | [payload] validate_post thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,764 | INFO     | [payload] failed_post thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,773 | INFO     | all job control threads have been joined
[2024-06-23 16:41:44] 2024-06-23 20:41:27,960 | INFO     | [payload] control thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,964 | INFO     | [data] control thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:27,982 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:28,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 16:41:44] 2024-06-23 20:41:28,336 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:28,419 | INFO     | [data] copytool_out thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:28,445 | INFO     | [data] copytool_in thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:28,574 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:28,778 | INFO     | [job] control thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:29,013 | INFO     | [job] queue monitor thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:30,797 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:36,302 | INFO     | job.realtimelogging is not enabled
[2024-06-23 16:41:44] 2024-06-23 20:41:37,307 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 16:41:44] 2024-06-23 20:41:38,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298095667008)>', '<ExcThread(monitor, started 140297371637504)>']
[2024-06-23 16:41:44] 2024-06-23 20:41:39,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 16:41:44] 2024-06-23 20:41:39,175 | INFO     | [monitor] control thread has ended
[2024-06-23 16:41:44] 2024-06-23 20:41:43,785 | INFO     | all workflow threads have been joined
[2024-06-23 16:41:44] 2024-06-23 20:41:43,786 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 16:41:44] 2024-06-23 20:41:43,786 | INFO     | traces error code: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:43,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 16:41:44] 2024-06-23 20:41:43,852 [wrapper] ==== pilot stdout END ====
[2024-06-23 16:41:44] 2024-06-23 20:41:43,854 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 16:41:44] 2024-06-23 20:41:43,856 [wrapper] pilotpid: 762011
[2024-06-23 16:41:44] 2024-06-23 20:41:43,858 [wrapper] Pilot exit status: 0
[2024-06-23 16:41:44] 2024-06-23 20:41:43,865 [wrapper] pandaids: 6242275512
[2024-06-23 16:41:44] 2024-06-23 20:41:43,882 [wrapper] cleanup supervisor_pilot  793046 762012
[2024-06-23 16:41:44] 2024-06-23 20:41:43,884 [wrapper] Test setup, not cleaning
[2024-06-23 16:41:44] 2024-06-23 20:41:43,886 [wrapper] ==== wrapper stdout END ====
[2024-06-23 16:41:44] 2024-06-23 20:41:43,888 [wrapper] ==== wrapper stderr END ====
[2024-06-23 16:41:44] 2024-06-23 20:41:43,892 [wrapper] apfmon messages muted
[2024-06-23 16:41:44]  *** Error codes and diagnostics ***
[2024-06-23 16:41:44]     "exeErrorCode": 0,
[2024-06-23 16:41:44]     "exeErrorDiag": "",
[2024-06-23 16:41:44]     "pilotErrorCode": 0,
[2024-06-23 16:41:44]     "pilotErrorDiag": "",
[2024-06-23 16:41:44]  *** Listing of results directory ***
[2024-06-23 16:41:44] total 877648
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc    469766 Jun 23 13:18 pilot3.tar.gz
[2024-06-23 16:41:44] -rwx------. 1 boinc boinc     32308 Jun 23 13:41 runpilot2-wrapper.sh
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc      5654 Jun 23 13:41 queuedata.json
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc       100 Jun 23 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 16:41:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun 23 13:43 run_atlas
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc       105 Jun 23 13:43 job.xml
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc      6167 Jun 23 13:43 init_data.xml
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc 543132744 Jun 23 13:43 EVNT.38776210._000938.pool.root.1
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc     17537 Jun 23 13:43 start_atlas.sh
[2024-06-23 16:41:44] drwxrwx--x. 2 boinc boinc        68 Jun 23 13:43 shared
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc    482519 Jun 23 13:43 input.tar.gz
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc         0 Jun 23 13:43 boinc_lockfile
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc      2647 Jun 23 13:43 pandaJob.out
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc       424 Jun 23 13:43 setup.sh.local
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc   1025344 Jun 23 13:44 agis_schedconf.cvmfs.json
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc         0 Jun 23 13:44 agis_ddmendpoints.agis.ALL.json
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc   1321363 Jun 23 13:44 cric_ddmendpoints.json
[2024-06-23 16:41:44] drwx------. 4 boinc boinc      4096 Jun 23 13:44 pilot3
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc 349268728 Jun 23 16:40 HITS.38921013._054687.pool.root.1
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc       533 Jun 23 16:40 boinc_task_state.xml
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc        95 Jun 23 16:41 pilot_heartbeat.json
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc      1038 Jun 23 16:41 memory_monitor_summary.json
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc    423684 Jun 23 16:41 log.38921013._054687.job.log.tgz.1
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc        29 Jun 23 16:41 wrapper_checkpoint.txt
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc      8192 Jun 23 16:41 boinc_mmap_file
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc      7746 Jun 23 16:41 heartbeat.json
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc      4468 Jun 23 16:41 pilotlog.txt
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc    973854 Jun 23 16:41 log.38921013._054687.job.log.1
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc       357 Jun 23 16:41 output.list
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc       620 Jun 23 16:41 runtime_log
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc   1413120 Jun 23 16:41 result.tar.gz
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc     10989 Jun 23 16:41 runtime_log.err
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc       651 Jun 23 16:41 JJrLDm2Ogf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmIprKDmOG6SUo.diag
[2024-06-23 16:41:44] -rw-r--r--. 1 boinc boinc     22093 Jun 23 16:41 stderr.txt
[2024-06-23 16:41:44] HITS file was successfully produced:
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc 349268728 Jun 23 16:40 shared/HITS.pool.root.1
[2024-06-23 16:41:44]  *** Contents of shared directory: ***
[2024-06-23 16:41:44] total 873360
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc 543132744 Jun 23 13:43 ATLAS.root_0
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc     17537 Jun 23 13:43 start_atlas.sh
[2024-06-23 16:41:44] -rw-r--r--. 2 boinc boinc    482519 Jun 23 13:43 input.tar.gz
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc 349268728 Jun 23 16:40 HITS.pool.root.1
[2024-06-23 16:41:44] -rw-------. 1 boinc boinc   1413120 Jun 23 16:41 result.tar.gz
16:41:45 (757254): run_atlas exited; CPU time 113144.430689
16:41:45 (757254): called boinc_finish(0)

</stderr_txt>
]]>

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