Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:45:43 (56085): wrapper (7.7.26015): starting
06:45:43 (56085): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 06:45:43] Arguments: --nthreads 12
[2024-06-23 06:45:43] Threads: 12
[2024-06-23 06:45:43] Checking for CVMFS
[2024-06-23 06:45:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 06:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 06:45:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 06:45:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 06:45:44] 2.10.1.0 2888 225576 151104 134203 1 117 26679651 45568001 9909 130560 0 1273143674 99.770 789348189 18786 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-23 06:45:44] CVMFS is ok
[2024-06-23 06:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 06:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 06:45:44] Further information can be found at the LHC@home message board.
[2024-06-23 06:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 06:45:44] Checking for apptainer binary...
[2024-06-23 06:45:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 06:45:44] Running /usr/bin/apptainer --version
[2024-06-23 06:45:44] apptainer version 1.3.2-1.el7
[2024-06-23 06:45:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 06:45:46] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0161.triumf.lcg
[2024-06-23 06:45:46] apptainer works
[2024-06-23 06:45:46] Set ATHENA_PROC_NUMBER=12
[2024-06-23 06:45:46] Set ATHENA_CORE_NUMBER=12
[2024-06-23 06:45:46] Starting ATLAS job with PandaID=6242157659
[2024-06-23 06:45:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 17:03:47]  *** The last 200 lines of the pilot log: ***
[2024-06-23 17:03:47] 2024-06-24 00:03:26,400 | INFO     | intersect: -12674880898.765697
[2024-06-23 17:03:47] 2024-06-24 00:03:26,401 | INFO     | chi2: 5.861936935528104
[2024-06-23 17:03:47] 2024-06-24 00:03:26,401 | INFO     | model: linear, x: [1719150387.0, 1719150448.0, 1719150509.0, 1719150570.0, 1719150631.0, 1719150692.0, 1719150753.0, 1719150814.0, 1719150875.0, 1719150936.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,402 | INFO     | sum of square deviations: 67652043779.96187
[2024-06-23 17:03:47] 2024-06-24 00:03:26,408 | INFO     | sum of deviations: 551476581224.7423
[2024-06-23 17:03:47] 2024-06-24 00:03:26,408 | INFO     | mean x: 1719168719.9584718
[2024-06-23 17:03:47] 2024-06-24 00:03:26,408 | INFO     | mean y: 2719830.589700997
[2024-06-23 17:03:47] 2024-06-24 00:03:26,408 | INFO     | -- intersect: -14011362158.046843
[2024-06-23 17:03:47] 2024-06-24 00:03:26,408 | INFO     | intersect: -14011362158.046843
[2024-06-23 17:03:47] 2024-06-24 00:03:26,409 | INFO     | chi2: 5.081545224772449
[2024-06-23 17:03:47] 2024-06-24 00:03:26,409 | INFO     | current chi2=5.081545224772449 (change=13.312864320082443 %)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,409 | INFO     | right removable region: 601
[2024-06-23 17:03:47] 2024-06-24 00:03:26,409 | INFO     | model: linear, x: [1719150692.0, 1719150753.0, 1719150814.0, 1719150875.0, 1719150936.0, 1719150997.0, 1719151058.0, 1719151119.0, 1719151180.0, 1719151241.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,409 | INFO     | sum of square deviations: 67651140979.96186
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | sum of deviations: 333845312004.42584
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | mean x: 1719169024.9584718
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | mean y: 2732179.377076412
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | -- intersect: -8481034852.661666
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | intersect: -8481034852.661666
[2024-06-23 17:03:47] 2024-06-24 00:03:26,416 | INFO     | chi2: 3.2006309309816556
[2024-06-23 17:03:47] 2024-06-24 00:03:26,417 | INFO     | current chi2=3.2006309309816556 (change=45.39977201762049 %)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,417 | INFO     | model: linear, x: [1719150997.0, 1719151058.0, 1719151119.0, 1719151180.0, 1719151241.0, 1719151302.0, 1719151363.0, 1719151424.0, 1719151485.0, 1719151546.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,417 | INFO     | sum of square deviations: 65979020996.9884
[2024-06-23 17:03:47] 2024-06-24 00:03:26,423 | INFO     | sum of deviations: 198359639447.42505
[2024-06-23 17:03:47] 2024-06-24 00:03:26,423 | INFO     | mean x: 1719169177.479062
[2024-06-23 17:03:47] 2024-06-24 00:03:26,424 | INFO     | mean y: 2744537.474036851
[2024-06-23 17:03:47] 2024-06-24 00:03:26,424 | INFO     | -- intersect: -5165773773.9667845
[2024-06-23 17:03:47] 2024-06-24 00:03:26,424 | INFO     | intersect: -5165773773.9667845
[2024-06-23 17:03:47] 2024-06-24 00:03:26,424 | INFO     | chi2: 1.7649688212449606
[2024-06-23 17:03:47] 2024-06-24 00:03:26,424 | INFO     | current chi2=1.7649688212449606 (change=44.855596933707304 %)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,425 | INFO     | model: linear, x: [1719151302.0, 1719151363.0, 1719151424.0, 1719151485.0, 1719151546.0, 1719151607.0, 1719151668.0, 1719151729.0, 1719151790.0, 1719151851.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,425 | INFO     | sum of square deviations: 64334668976.0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,431 | INFO     | sum of deviations: 100570155114.00002
[2024-06-23 17:03:47] 2024-06-24 00:03:26,431 | INFO     | mean x: 1719169330.0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,431 | INFO     | mean y: 2753591.3597972975
[2024-06-23 17:03:47] 2024-06-24 00:03:26,431 | INFO     | -- intersect: -2684710709.573042
[2024-06-23 17:03:47] 2024-06-24 00:03:26,431 | INFO     | intersect: -2684710709.573042
[2024-06-23 17:03:47] 2024-06-24 00:03:26,432 | INFO     | chi2: 0.8895257755900758
[2024-06-23 17:03:47] 2024-06-24 00:03:26,432 | INFO     | current chi2=0.8895257755900758 (change=49.601048761720975 %)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,432 | INFO     | model: linear, x: [1719151607.0, 1719151668.0, 1719151729.0, 1719151790.0, 1719151851.0, 1719151912.0, 1719151973.0, 1719152034.0, 1719152096.0, 1719152157.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,432 | INFO     | sum of square deviations: 62717852354.48382
[2024-06-23 17:03:47] 2024-06-24 00:03:26,438 | INFO     | sum of deviations: 71186293587.84842
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | mean x: 1719169482.5212948
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | mean y: 2756363.252129472
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | -- intersect: -1948542970.4419885
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | intersect: -1948542970.4419885
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | chi2: 0.8307746717455473
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | current chi2=0.8307746717455473 (change=6.604766883292999 %)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,439 | INFO     | left removable region: 40
[2024-06-23 17:03:47] 2024-06-24 00:03:26,440 | INFO     | model: linear, x: [1719152827.0, 1719152888.0, 1719152950.0, 1719153010.0, 1719153075.0, 1719153132.0, 1719153197.0, 1719153262.0, 1719153326.0, 1719153377.0, 1719
[2024-06-23 17:03:47] 2024-06-24 00:03:26,440 | INFO     | sum of square deviations: 54746572763.13759
[2024-06-23 17:03:47] 2024-06-24 00:03:26,446 | INFO     | sum of deviations: 74371550726.21573
[2024-06-23 17:03:47] 2024-06-24 00:03:26,446 | INFO     | mean x: 1719169909.627451
[2024-06-23 17:03:47] 2024-06-24 00:03:26,446 | INFO     | mean y: 2764220.3885918004
[2024-06-23 17:03:47] 2024-06-24 00:03:26,446 | INFO     | -- intersect: -2332675711.057338
[2024-06-23 17:03:47] 2024-06-24 00:03:26,446 | INFO     | intersect: -2332675711.057338
[2024-06-23 17:03:47] 2024-06-24 00:03:26,447 | INFO     | chi2: 0.0033576500144308
[2024-06-23 17:03:47] 2024-06-24 00:03:26,447 | INFO     | -- intersect: -2332675711.057338
[2024-06-23 17:03:47] 2024-06-24 00:03:26,447 | INFO     | current memory leak: 1.36 B/s (using 561 data points, chi2=0.00)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | ..............................
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . Timing measurements:
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . get job = 0 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . initial setup = 3 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . payload setup = 6 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . stage-in = 0 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . payload execution = 37008 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . stage-out = 2 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | . log creation = 0 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,448 | INFO     | ..............................
[2024-06-23 17:03:47] 2024-06-24 00:03:26,521 | INFO     | 
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | job summary report
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | --------------------------------------------------
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | PanDA job id: 6242157659
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | task id: 38921001
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | errors: (none)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 17:03:47] 2024-06-24 00:03:26,522 | INFO     | pilot state: finished 
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | transexitcode: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | exeerrorcode: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | exeerrordiag: 
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | exitcode: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | exitmsg: OK
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | cpuconsumptiontime: 113522 s
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | nevents: 400
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | neventsw: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,523 | INFO     | pid: 67884
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | pgrp: 67884
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | corecount: 12
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | event service: False
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | sizes: {0: 2387130, 5: 2387336, 11: 2387392, 37019: 2426973, 37022: 2435927, 37025: 2435983, 37031: 2436281}
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | --------------------------------------------------
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | 
[2024-06-23 17:03:47] 2024-06-24 00:03:26,524 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-23 17:03:47] 2024-06-24 00:03:26,548 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | job 6242157659 has completed (purged errors)
[2024-06-23 17:03:47] 2024-06-24 00:03:26,550 | INFO     | overall cleanup function is called
[2024-06-23 17:03:47] 2024-06-24 00:03:27,560 | INFO     | --- collectZombieJob: --- 10, [67884]
[2024-06-23 17:03:47] 2024-06-24 00:03:27,585 | INFO     | zombie collector waiting for pid 67884
[2024-06-23 17:03:47] 2024-06-24 00:03:27,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 17:03:47] 2024-06-24 00:03:28,589 | INFO     | collected zombie processes
[2024-06-23 17:03:47] 2024-06-24 00:03:28,590 | INFO     | will now attempt to kill all subprocesses of pid=67884
[2024-06-23 17:03:47] 2024-06-24 00:03:28,744 | INFO     | process IDs to be killed: [67884] (in reverse order)
[2024-06-23 17:03:47] 2024-06-24 00:03:28,840 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 17:03:47] 2024-06-24 00:03:28,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 17:03:47] 2024-06-24 00:03:28,848 | INFO     | did not find any defunct processes belonging to 67884
[2024-06-23 17:03:47] 2024-06-24 00:03:28,854 | INFO     | did not find any defunct processes belonging to 67884
[2024-06-23 17:03:47] 2024-06-24 00:03:28,854 | INFO     | ready for new job
[2024-06-23 17:03:47] 2024-06-24 00:03:28,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 17:03:47] 2024-06-24 00:03:28,858 | INFO     | *************************************
[2024-06-23 17:03:47] 2024-06-24 00:03:28,858 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 17:03:47] 2024-06-24 00:03:28,858 | INFO     | *************************************
[2024-06-23 17:03:47] 2024-06-24 00:03:28,858 | INFO     | 
[2024-06-23 17:03:47] 2024-06-24 00:03:28,861 | INFO     | architecture information:
[2024-06-23 17:03:47] 2024-06-24 00:03:28,861 | INFO     | executing command: cat /etc/os-release
[2024-06-23 17:03:47] 2024-06-24 00:03:28,876 | INFO     | cat /etc/os-release:
[2024-06-23 17:03:47] NAME="CentOS Linux"
[2024-06-23 17:03:47] VERSION="7 (Core)"
[2024-06-23 17:03:47] ID="centos"
[2024-06-23 17:03:47] ID_LIKE="rhel fedora"
[2024-06-23 17:03:47] VERSION_ID="7"
[2024-06-23 17:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 17:03:47] ANSI_COLOR="0;31"
[2024-06-23 17:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 17:03:47] HOME_URL="https://www.centos.org/"
[2024-06-23 17:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 17:03:47] 
[2024-06-23 17:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 17:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 17:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 17:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 17:03:47] 
[2024-06-23 17:03:47] 2024-06-24 00:03:28,876 | INFO     | *************************************
[2024-06-23 17:03:47] 2024-06-24 00:03:29,381 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-23 17:03:47] 2024-06-24 00:03:29,409 | INFO     | sufficient remaining disk space (1965103775744 B)
[2024-06-23 17:03:47] 2024-06-24 00:03:29,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 17:03:47] 2024-06-24 00:03:29,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 17:03:47] 2024-06-24 00:03:29,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 17:03:47] 2024-06-24 00:03:29,810 | INFO     | aborting loop
[2024-06-23 17:03:47] 2024-06-24 00:03:29,930 | INFO     | all data control threads have been joined
[2024-06-23 17:03:47] 2024-06-24 00:03:30,040 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 17:03:47] 2024-06-24 00:03:30,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 17:03:47] 2024-06-24 00:03:30,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 17:03:47] 2024-06-24 00:03:30,416 | INFO     | [job] retrieve thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:30,697 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:30,814 | INFO     | [job] job monitor thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:30,881 | INFO     | all payload control threads have been joined
[2024-06-23 17:03:47] 2024-06-24 00:03:30,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 17:03:47] 2024-06-24 00:03:30,896 | INFO     | all job control threads have been joined
[2024-06-23 17:03:47] 2024-06-24 00:03:30,935 | INFO     | [data] control thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,301 | INFO     | [job] validate thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,312 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 17:03:47] 2024-06-24 00:03:31,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 17:03:47] 2024-06-24 00:03:31,717 | INFO     | [payload] validate_post thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,758 | INFO     | [payload] failed_post thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,809 | INFO     | [data] copytool_in thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,816 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,886 | INFO     | [payload] control thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:31,901 | INFO     | [job] control thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:32,538 | INFO     | [job] queue monitor thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:32,889 | INFO     | [data] copytool_out thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:35,370 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:39,525 | INFO     | job.realtimelogging is not enabled
[2024-06-23 17:03:47] 2024-06-24 00:03:40,530 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 17:03:47] 2024-06-24 00:03:41,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900055652160)>', '<ExcThread(monitor, started 139899483182848)>']
[2024-06-23 17:03:47] 2024-06-24 00:03:42,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 17:03:47] 2024-06-24 00:03:42,097 | INFO     | [monitor] control thread has ended
[2024-06-23 17:03:47] 2024-06-24 00:03:46,321 | INFO     | all workflow threads have been joined
[2024-06-23 17:03:47] 2024-06-24 00:03:46,322 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 17:03:47] 2024-06-24 00:03:46,323 | INFO     | traces error code: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:46,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 17:03:47] 2024-06-24 00:03:46,488 [wrapper] ==== pilot stdout END ====
[2024-06-23 17:03:47] 2024-06-24 00:03:46,496 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 17:03:47] 2024-06-24 00:03:46,500 [wrapper] pilotpid: 60249
[2024-06-23 17:03:47] 2024-06-24 00:03:46,503 [wrapper] Pilot exit status: 0
[2024-06-23 17:03:47] 2024-06-24 00:03:46,517 [wrapper] pandaids: 6242157659
[2024-06-23 17:03:47] 2024-06-24 00:03:46,588 [wrapper] cleanup supervisor_pilot 212652 60250
[2024-06-23 17:03:47] 2024-06-24 00:03:46,591 [wrapper] Test setup, not cleaning
[2024-06-23 17:03:47] 2024-06-24 00:03:46,594 [wrapper] ==== wrapper stdout END ====
[2024-06-23 17:03:47] 2024-06-24 00:03:46,597 [wrapper] ==== wrapper stderr END ====
[2024-06-23 17:03:47] 2024-06-24 00:03:46,602 [wrapper] apfmon messages muted
[2024-06-23 17:03:47]  *** Error codes and diagnostics ***
[2024-06-23 17:03:47]     "exeErrorCode": 0,
[2024-06-23 17:03:47]     "exeErrorDiag": "",
[2024-06-23 17:03:47]     "pilotErrorCode": 0,
[2024-06-23 17:03:47]     "pilotErrorDiag": "",
[2024-06-23 17:03:47]  *** Listing of results directory ***
[2024-06-23 17:03:47] total 959736
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc    469766 Jun 23 06:20 pilot3.tar.gz
[2024-06-23 17:03:47] -rwx------ 1 boinc boinc     32308 Jun 23 06:43 runpilot2-wrapper.sh
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc      5654 Jun 23 06:43 queuedata.json
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc       100 Jun 23 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 17:03:47] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 06:45 run_atlas
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc       105 Jun 23 06:45 job.xml
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc 610933939 Jun 23 06:45 EVNT.38776190._000416.pool.root.1
[2024-06-23 17:03:47] drwxrwx--x 2 boinc boinc      4096 Jun 23 06:45 shared
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc    482530 Jun 23 06:45 input.tar.gz
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc      6623 Jun 23 06:45 init_data.xml
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc     17537 Jun 23 06:45 start_atlas.sh
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc         0 Jun 23 06:45 boinc_lockfile
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc      2655 Jun 23 06:45 pandaJob.out
[2024-06-23 17:03:47] -rw------- 1 boinc boinc       424 Jun 23 06:45 setup.sh.local
[2024-06-23 17:03:47] -rw------- 1 boinc boinc   1025376 Jun 23 06:45 agis_schedconf.cvmfs.json
[2024-06-23 17:03:47] -rw------- 1 boinc boinc   1321363 Jun 23 06:45 cric_ddmendpoints.json
[2024-06-23 17:03:47] drwx------ 4 boinc boinc      4096 Jun 23 06:46 pilot3
[2024-06-23 17:03:47] -rw------- 1 boinc boinc 358610151 Jun 23 17:02 HITS.38921001._065260.pool.root.1
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc       533 Jun 23 17:02 boinc_task_state.xml
[2024-06-23 17:03:47] -rw------- 1 boinc boinc        95 Jun 23 17:02 pilot_heartbeat.json
[2024-06-23 17:03:47] -rw------- 1 boinc boinc      1086 Jun 23 17:03 memory_monitor_summary.json
[2024-06-23 17:03:47] -rw------- 1 boinc boinc         0 Jun 23 17:03 agis_ddmendpoints.agis.ALL.json
[2024-06-23 17:03:47] -rw------- 1 boinc boinc    707709 Jun 23 17:03 log.38921001._065260.job.log.tgz.1
[2024-06-23 17:03:47] -rw------- 1 boinc boinc      7815 Jun 23 17:03 heartbeat.json
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc      8192 Jun 23 17:03 boinc_mmap_file
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc        29 Jun 23 17:03 wrapper_checkpoint.txt
[2024-06-23 17:03:47] -rw------- 1 boinc boinc      4282 Jun 23 17:03 pilotlog.txt
[2024-06-23 17:03:47] -rw------- 1 boinc boinc   4133809 Jun 23 17:03 log.38921001._065260.job.log.1
[2024-06-23 17:03:47] -rw------- 1 boinc boinc       357 Jun 23 17:03 output.list
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc       620 Jun 23 17:03 runtime_log
[2024-06-23 17:03:47] -rw------- 1 boinc boinc   4864000 Jun 23 17:03 result.tar.gz
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc     11287 Jun 23 17:03 runtime_log.err
[2024-06-23 17:03:47] -rw------- 1 boinc boinc       661 Jun 23 17:03 fceKDmYgcf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmHyYKDmvreXGn.diag
[2024-06-23 17:03:47] -rw-r--r-- 1 boinc boinc     21861 Jun 23 17:03 stderr.txt
[2024-06-23 17:03:47] HITS file was successfully produced:
[2024-06-23 17:03:47] -rw------- 1 boinc boinc 358610151 Jun 23 17:02 shared/HITS.pool.root.1
[2024-06-23 17:03:47]  *** Contents of shared directory: ***
[2024-06-23 17:03:47] total 952076
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc 610933939 Jun 23 06:45 ATLAS.root_0
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc    482530 Jun 23 06:45 input.tar.gz
[2024-06-23 17:03:47] -rw-r--r-- 2 boinc boinc     17537 Jun 23 06:45 start_atlas.sh
[2024-06-23 17:03:47] -rw------- 1 boinc boinc 358610151 Jun 23 17:02 HITS.pool.root.1
[2024-06-23 17:03:47] -rw------- 1 boinc boinc   4864000 Jun 23 17:03 result.tar.gz
17:03:49 (56085): run_atlas exited; CPU time 112588.797140
17:03:49 (56085): called boinc_finish(0)

</stderr_txt>
]]>

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