Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
11:06:59 (2883041): wrapper (7.7.26015): starting
11:06:59 (2883041): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 11:06:59] Arguments: --nthreads 4
[2024-06-23 11:06:59] Threads: 4
[2024-06-23 11:06:59] Checking for CVMFS
[2024-06-23 11:07:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 11:07:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 11:07:00] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 11:07:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 11:07:00] 2.11.2.0 8969 25452 57276 134195 0 189 2794837 4096001 6447 130560 0 129714335 99.969 7588205 1215 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-23 11:07:00] CVMFS is ok
[2024-06-23 11:07:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 11:07:00] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-23 11:07:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-23 11:07:00] Further information can be found at the LHC@home message board.
[2024-06-23 11:07:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 11:07:00] Checking for apptainer binary...
[2024-06-23 11:07:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 11:07:00] Running /usr/bin/apptainer --version
[2024-06-23 11:07:00] apptainer version 1.2.5
[2024-06-23 11:07:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 11:07:00] Ryzen-9-5950X-Zen3-Ubu23
[2024-06-23 11:07:00] apptainer works
[2024-06-23 11:07:00] Set ATHENA_PROC_NUMBER=4
[2024-06-23 11:07:00] Set ATHENA_CORE_NUMBER=4
[2024-06-23 11:07:00] Starting ATLAS job with PandaID=6241923871
[2024-06-23 11:07:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 18:05:09]  *** The last 200 lines of the pilot log: ***
[2024-06-23 18:05:09] 2024-06-23 16:04:56,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 18:05:09] 2024-06-23 16:04:56,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 18:05:09] 2024-06-23 16:04:56,777 | INFO     | fitting pss+swap vs Time
[2024-06-23 18:05:09] 2024-06-23 16:04:56,777 | INFO     | model: linear, x: [1719133652.0, 1719133713.0, 1719133774.0, 1719133835.0, 1719133896.0, 1719133957.0, 1719134018.0, 1719134079.0, 1719134140.0, 1719134201.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,777 | INFO     | sum of square deviations: 21527882710.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,780 | INFO     | sum of deviations: 135419077558.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,780 | INFO     | mean x: 1719146157.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,780 | INFO     | mean y: 2336160.197080292
[2024-06-23 18:05:09] 2024-06-23 16:04:56,780 | INFO     | -- intersect: -10811787546.45891
[2024-06-23 18:05:09] 2024-06-23 16:04:56,780 | INFO     | intersect: -10811787546.45891
[2024-06-23 18:05:09] 2024-06-23 16:04:56,781 | INFO     | chi2: 4.684090908464647
[2024-06-23 18:05:09] 2024-06-23 16:04:56,781 | INFO     | model: linear, x: [1719133652.0, 1719133713.0, 1719133774.0, 1719133835.0, 1719133896.0, 1719133957.0, 1719134018.0, 1719134079.0, 1719134140.0, 1719134201.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,781 | INFO     | sum of square deviations: 20751710017.5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,784 | INFO     | sum of deviations: 159461214347.99997
[2024-06-23 18:05:09] 2024-06-23 16:04:56,784 | INFO     | mean x: 1719146004.5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,784 | INFO     | mean y: 2340833.9950738917
[2024-06-23 18:05:09] 2024-06-23 16:04:56,784 | INFO     | -- intersect: -13207997460.434702
[2024-06-23 18:05:09] 2024-06-23 16:04:56,784 | INFO     | intersect: -13207997460.434702
[2024-06-23 18:05:09] 2024-06-23 16:04:56,785 | INFO     | chi2: 3.927301284482233
[2024-06-23 18:05:09] 2024-06-23 16:04:56,785 | INFO     | current chi2=3.927301284482233 (change=16.156595565103473 %)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,785 | INFO     | right removable region: 405
[2024-06-23 18:05:09] 2024-06-23 16:04:56,785 | INFO     | model: linear, x: [1719133957.0, 1719134018.0, 1719134079.0, 1719134140.0, 1719134201.0, 1719134262.0, 1719134323.0, 1719134384.0, 1719134445.0, 1719134506.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,785 | INFO     | sum of square deviations: 20751710017.5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,788 | INFO     | sum of deviations: 42006812500.500015
[2024-06-23 18:05:09] 2024-06-23 16:04:56,788 | INFO     | mean x: 1719146309.5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,788 | INFO     | mean y: 2354484.4359605913
[2024-06-23 18:05:09] 2024-06-23 16:04:56,788 | INFO     | -- intersect: -3477640977.2967424
[2024-06-23 18:05:09] 2024-06-23 16:04:56,788 | INFO     | intersect: -3477640977.2967424
[2024-06-23 18:05:09] 2024-06-23 16:04:56,789 | INFO     | chi2: 2.387031089395654
[2024-06-23 18:05:09] 2024-06-23 16:04:56,789 | INFO     | current chi2=2.387031089395654 (change=49.03960798279904 %)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,789 | INFO     | model: linear, x: [1719134262.0, 1719134323.0, 1719134384.0, 1719134445.0, 1719134506.0, 1719134567.0, 1719134628.0, 1719134689.0, 1719134750.0, 1719134811.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,789 | INFO     | sum of square deviations: 19994421400.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | sum of deviations: -35747237995.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | mean x: 1719146462.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | mean y: 2370148.710723192
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | -- intersect: 3075964352.6108284
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | intersect: 3075964352.6108284
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | chi2: 0.9265453569509786
[2024-06-23 18:05:09] 2024-06-23 16:04:56,792 | INFO     | current chi2=0.9265453569509786 (change=61.18419399449212 %)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,793 | INFO     | model: linear, x: [1719134567.0, 1719134628.0, 1719134689.0, 1719134750.0, 1719134811.0, 1719134872.0, 1719134933.0, 1719134994.0, 1719135055.0, 1719135116.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,793 | INFO     | sum of square deviations: 19255784295.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | sum of deviations: -51072698624.49999
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | mean x: 1719146614.5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | mean y: 2373298.6136363638
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | -- intersect: 4562117819.45804
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | intersect: 4562117819.45804
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | chi2: 0.8307492299781339
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | current chi2=0.8307492299781339 (change=10.339065028406702 %)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,796 | INFO     | left removable region: 30
[2024-06-23 18:05:09] 2024-06-23 16:04:56,797 | INFO     | model: linear, x: [1719135482.0, 1719135543.0, 1719135604.0, 1719135665.0, 1719135726.0, 1719135787.0, 1719135848.0, 1719135909.0, 1719135970.0, 1719136031.0, 1719
[2024-06-23 18:05:09] 2024-06-23 16:04:56,797 | INFO     | sum of square deviations: 16351934500.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,799 | INFO     | sum of deviations: -18583942251.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,799 | INFO     | mean x: 1719146889.0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,799 | INFO     | mean y: 2377032.8026666665
[2024-06-23 18:05:09] 2024-06-23 16:04:56,799 | INFO     | -- intersect: 1956184180.5846193
[2024-06-23 18:05:09] 2024-06-23 16:04:56,799 | INFO     | intersect: 1956184180.5846193
[2024-06-23 18:05:09] 2024-06-23 16:04:56,800 | INFO     | chi2: 0.04258680172421533
[2024-06-23 18:05:09] 2024-06-23 16:04:56,800 | INFO     | -- intersect: 1956184180.5846193
[2024-06-23 18:05:09] 2024-06-23 16:04:56,800 | INFO     | current memory leak: -1.14 B/s (using 375 data points, chi2=0.04)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,800 | INFO     | ..............................
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . Timing measurements:
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . get job = 0 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . initial setup = 1 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . payload setup = 4 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . stage-in = 0 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . payload execution = 25033 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . stage-out = 1 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | . log creation = 0 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,801 | INFO     | ..............................
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | 
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | job summary report
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | --------------------------------------------------
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | PanDA job id: 6241923871
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | task id: 38921001
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | errors: (none)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | pilot state: finished 
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | transexitcode: 0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | exeerrorcode: 0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | exeerrordiag: 
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | exitcode: 0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,877 | INFO     | exitmsg: OK
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | cpuconsumptiontime: 95831 s
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | nevents: 400
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | neventsw: 0
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | pid: 2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | pgrp: 2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | corecount: 4
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | event service: False
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | sizes: {0: 2386869, 1: 2387068, 4: 2387274, 11: 2387302, 25041: 2422840, 25043: 2431814, 25046: 2431998, 25053: 2432168}
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | --------------------------------------------------
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | 
[2024-06-23 18:05:09] 2024-06-23 16:04:56,878 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | job 6241923871 has completed (purged errors)
[2024-06-23 18:05:09] 2024-06-23 16:04:56,899 | INFO     | overall cleanup function is called
[2024-06-23 18:05:09] 2024-06-23 16:04:57,904 | INFO     | --- collectZombieJob: --- 10, [2894087]
[2024-06-23 18:05:09] 2024-06-23 16:04:57,905 | INFO     | zombie collector waiting for pid 2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:57,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 18:05:09] 2024-06-23 16:04:58,907 | INFO     | collected zombie processes
[2024-06-23 18:05:09] 2024-06-23 16:04:58,907 | INFO     | will now attempt to kill all subprocesses of pid=2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:58,979 | INFO     | process IDs to be killed: [2894087] (in reverse order)
[2024-06-23 18:05:09] 2024-06-23 16:04:59,044 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 18:05:09] 2024-06-23 16:04:59,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 18:05:09] 2024-06-23 16:04:59,048 | INFO     | did not find any defunct processes belonging to 2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:59,051 | INFO     | did not find any defunct processes belonging to 2894087
[2024-06-23 18:05:09] 2024-06-23 16:04:59,051 | INFO     | ready for new job
[2024-06-23 18:05:09] 2024-06-23 16:04:59,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 18:05:09] 2024-06-23 16:04:59,053 | INFO     | *************************************
[2024-06-23 18:05:09] 2024-06-23 16:04:59,053 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 18:05:09] 2024-06-23 16:04:59,053 | INFO     | *************************************
[2024-06-23 18:05:09] 2024-06-23 16:04:59,053 | INFO     | 
[2024-06-23 18:05:09] 2024-06-23 16:04:59,055 | INFO     | architecture information:
[2024-06-23 18:05:09] 2024-06-23 16:04:59,055 | INFO     | executing command: cat /etc/os-release
[2024-06-23 18:05:09] 2024-06-23 16:04:59,070 | INFO     | cat /etc/os-release:
[2024-06-23 18:05:09] NAME="CentOS Linux"
[2024-06-23 18:05:09] VERSION="7 (Core)"
[2024-06-23 18:05:09] ID="centos"
[2024-06-23 18:05:09] ID_LIKE="rhel fedora"
[2024-06-23 18:05:09] VERSION_ID="7"
[2024-06-23 18:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 18:05:09] ANSI_COLOR="0;31"
[2024-06-23 18:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 18:05:09] HOME_URL="https://www.centos.org/"
[2024-06-23 18:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 18:05:09] 
[2024-06-23 18:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 18:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 18:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 18:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 18:05:09] 
[2024-06-23 18:05:09] 2024-06-23 16:04:59,070 | INFO     | *************************************
[2024-06-23 18:05:09] 2024-06-23 16:04:59,571 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | INFO     | sufficient remaining disk space (1980450734080 B)
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 18:05:09] 2024-06-23 16:04:59,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 18:05:09] 2024-06-23 16:04:59,588 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 18:05:09] 2024-06-23 16:04:59,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 18:05:09] 2024-06-23 16:04:59,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 18:05:09] 2024-06-23 16:04:59,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 18:05:09] 2024-06-23 16:04:59,588 | INFO     | aborting loop
[2024-06-23 18:05:09] 2024-06-23 16:05:00,134 | INFO     | all data control threads have been joined
[2024-06-23 18:05:09] 2024-06-23 16:05:00,591 | INFO     | [job] retrieve thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:00,593 | INFO     | [job] job monitor thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:00,821 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:00,930 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,022 | INFO     | all payload control threads have been joined
[2024-06-23 18:05:09] 2024-06-23 16:05:01,047 | INFO     | [job] validate thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,092 | INFO     | all job control threads have been joined
[2024-06-23 18:05:09] 2024-06-23 16:05:01,140 | INFO     | [data] control thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,171 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,236 | INFO     | [data] copytool_in thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,460 | INFO     | [payload] validate_post thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,548 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,591 | INFO     | [data] copytool_out thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:01,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 18:05:09] 2024-06-23 16:05:01,911 | INFO     | [payload] failed_post thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:02,027 | INFO     | [payload] control thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:02,095 | INFO     | [job] control thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:02,891 | INFO     | [job] queue monitor thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:03,592 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 18:05:09] 2024-06-23 16:05:04,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124200216250176)>', '<ExcThread(monitor, started 124199867750144)>']
[2024-06-23 18:05:09] 2024-06-23 16:05:05,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 18:05:09] 2024-06-23 16:05:05,612 | INFO     | [monitor] control thread has ended
[2024-06-23 18:05:09] 2024-06-23 16:05:09,711 | INFO     | all workflow threads have been joined
[2024-06-23 18:05:09] 2024-06-23 16:05:09,711 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 18:05:09] 2024-06-23 16:05:09,712 | INFO     | traces error code: 0
[2024-06-23 18:05:09] 2024-06-23 16:05:09,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 18:05:09] 2024-06-23 16:05:09,784 [wrapper] ==== pilot stdout END ====
[2024-06-23 18:05:09] 2024-06-23 16:05:09,787 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 18:05:09] 2024-06-23 16:05:09,789 [wrapper] pilotpid: 2887391
[2024-06-23 18:05:09] 2024-06-23 16:05:09,791 [wrapper] Pilot exit status: 0
[2024-06-23 18:05:09] 2024-06-23 16:05:09,800 [wrapper] pandaids: 6241923871
[2024-06-23 18:05:09] 2024-06-23 16:05:09,839 [wrapper] cleanup supervisor_pilot 3310612 2887392
[2024-06-23 18:05:09] 2024-06-23 16:05:09,842 [wrapper] Test setup, not cleaning
[2024-06-23 18:05:09] 2024-06-23 16:05:09,844 [wrapper] ==== wrapper stdout END ====
[2024-06-23 18:05:09] 2024-06-23 16:05:09,846 [wrapper] ==== wrapper stderr END ====
[2024-06-23 18:05:09] 2024-06-23 16:05:09,850 [wrapper] apfmon messages muted
[2024-06-23 18:05:09]  *** Error codes and diagnostics ***
[2024-06-23 18:05:09]     "exeErrorCode": 0,
[2024-06-23 18:05:09]     "exeErrorDiag": "",
[2024-06-23 18:05:09]     "pilotErrorCode": 0,
[2024-06-23 18:05:09]     "pilotErrorDiag": "",
[2024-06-23 18:05:09]  *** Listing of results directory ***
[2024-06-23 18:05:09] total 964500
[2024-06-23 18:05:09] -rwx------ 1 boinc boinc     32308 Jun 23 08:17 runpilot2-wrapper.sh
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc      5654 Jun 23 08:17 queuedata.json
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc    469766 Jun 23 08:17 pilot3.tar.gz
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc       100 Jun 23 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 18:05:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 11:06 run_atlas
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc       105 Jun 23 11:06 job.xml
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc      6774 Jun 23 11:06 init_data.xml
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc 618317551 Jun 23 11:06 EVNT.38776190._000974.pool.root.1
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc     17537 Jun 23 11:06 start_atlas.sh
[2024-06-23 18:05:09] drwxrwx--x 2 boinc boinc      4096 Jun 23 11:06 shared
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc    482528 Jun 23 11:06 input.tar.gz
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc         0 Jun 23 11:06 boinc_lockfile
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc      2655 Jun 23 11:07 pandaJob.out
[2024-06-23 18:05:09] -rw------- 1 boinc boinc       424 Jun 23 11:07 setup.sh.local
[2024-06-23 18:05:09] -rw------- 1 boinc boinc   1025286 Jun 23 11:07 agis_schedconf.cvmfs.json
[2024-06-23 18:05:09] -rw------- 1 boinc boinc   1321363 Jun 23 11:07 cric_ddmendpoints.json
[2024-06-23 18:05:09] drwx------ 4 boinc boinc      4096 Jun 23 11:07 pilot3
[2024-06-23 18:05:09] -rw------- 1 boinc boinc        95 Jun 23 18:04 pilot_heartbeat.json
[2024-06-23 18:05:09] -rw------- 1 boinc boinc 359562633 Jun 23 18:04 HITS.38921001._065199.pool.root.1
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc       532 Jun 23 18:04 boinc_task_state.xml
[2024-06-23 18:05:09] -rw------- 1 boinc boinc      1040 Jun 23 18:04 memory_monitor_summary.json
[2024-06-23 18:05:09] -rw------- 1 boinc boinc         0 Jun 23 18:04 agis_ddmendpoints.agis.ALL.json
[2024-06-23 18:05:09] -rw------- 1 boinc boinc    460906 Jun 23 18:04 log.38921001._065199.job.log.tgz.1
[2024-06-23 18:05:09] -rw------- 1 boinc boinc      7696 Jun 23 18:04 heartbeat.json
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc        28 Jun 23 18:05 wrapper_checkpoint.txt
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc      8192 Jun 23 18:05 boinc_mmap_file
[2024-06-23 18:05:09] -rw------- 1 boinc boinc      4343 Jun 23 18:05 pilotlog.txt
[2024-06-23 18:05:09] -rw------- 1 boinc boinc   2655819 Jun 23 18:05 log.38921001._065199.job.log.1
[2024-06-23 18:05:09] -rw------- 1 boinc boinc       357 Jun 23 18:05 output.list
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc       620 Jun 23 18:05 runtime_log
[2024-06-23 18:05:09] -rw------- 1 boinc boinc   3133440 Jun 23 18:05 result.tar.gz
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc     11153 Jun 23 18:05 runtime_log.err
[2024-06-23 18:05:09] -rw------- 1 boinc boinc       649 Jun 23 18:05 B6cKDmBjVf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmxvYKDmepaAQm.diag
[2024-06-23 18:05:09] -rw-r--r-- 1 boinc boinc     21649 Jun 23 18:05 stderr.txt
[2024-06-23 18:05:09] HITS file was successfully produced:
[2024-06-23 18:05:09] -rw------- 1 boinc boinc 359562633 Jun 23 18:04 shared/HITS.pool.root.1
[2024-06-23 18:05:09]  *** Contents of shared directory: ***
[2024-06-23 18:05:09] total 958524
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc 618317551 Jun 23 11:06 ATLAS.root_0
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc     17537 Jun 23 11:06 start_atlas.sh
[2024-06-23 18:05:09] -rw-r--r-- 2 boinc boinc    482528 Jun 23 11:06 input.tar.gz
[2024-06-23 18:05:09] -rw------- 1 boinc boinc 359562633 Jun 23 18:04 HITS.pool.root.1
[2024-06-23 18:05:09] -rw------- 1 boinc boinc   3133440 Jun 23 18:05 result.tar.gz
18:05:11 (2883041): run_atlas exited; CPU time 95663.623988
18:05:11 (2883041): called boinc_finish(0)

</stderr_txt>
]]>

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