Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:58:32 (26979): wrapper (7.7.26015): starting
01:58:32 (26979): wrapper: running run_atlas (--nthreads 8)
[2024-06-23 01:58:32] Arguments: --nthreads 8
[2024-06-23 01:58:32] Threads: 8
[2024-06-23 01:58:32] Checking for CVMFS
[2024-06-23 01:58:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 01:58:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 01:58:32] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 01:58:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 01:58:32] 2.11.2.0 56809 17742 118736 134191 0 190 14904785 18432001 10511 130560 0 17362026 99.807 5580518 53004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-23 01:58:32] CVMFS is ok
[2024-06-23 01:58:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 01:58:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 01:58:32] Further information can be found at the LHC@home message board.
[2024-06-23 01:58:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 01:58:32] Checking for apptainer binary...
[2024-06-23 01:58:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 01:58:32] Running /usr/bin/apptainer --version
[2024-06-23 01:58:32] apptainer version 1.3.1-1.el7
[2024-06-23 01:58:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 01:58:32] c-212-19.aglt2.org
[2024-06-23 01:58:32] apptainer works
[2024-06-23 01:58:32] Set ATHENA_PROC_NUMBER=8
[2024-06-23 01:58:32] Set ATHENA_CORE_NUMBER=8
[2024-06-23 01:58:32] Starting ATLAS job with PandaID=6241914246
[2024-06-23 01:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 07:45:03]  *** The last 200 lines of the pilot log: ***
[2024-06-23 07:45:03] 2024-06-23 11:44:41,678 | INFO     | sum of square deviations: 11657618867.988031
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | sum of deviations: 196290838905.34024
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | mean x: 1719132530.0059702
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | mean y: 2511977.8298507463
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | -- intersect: -28944219796.955975
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | intersect: -28944219796.955975
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | chi2: 4.9039059890330625
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | current chi2=4.9039059890330625 (change=13.548141883986137 %)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,680 | INFO     | right removable region: 334
[2024-06-23 07:45:03] 2024-06-23 11:44:41,681 | INFO     | model: linear, x: [1719122648.0, 1719122709.0, 1719122770.0, 1719122831.0, 1719122892.0, 1719122953.0, 1719123014.0, 1719123075.0, 1719123136.0, 1719123197.0, 1719
[2024-06-23 07:45:03] 2024-06-23 11:44:41,681 | INFO     | sum of square deviations: 11657617647.988031
[2024-06-23 07:45:03] 2024-06-23 11:44:41,683 | INFO     | sum of deviations: 85208798028.36716
[2024-06-23 07:45:03] 2024-06-23 11:44:41,683 | INFO     | mean x: 1719132835.0059702
[2024-06-23 07:45:03] 2024-06-23 11:44:41,683 | INFO     | mean y: 2532216.3164179106
[2024-06-23 07:45:03] 2024-06-23 11:44:41,683 | INFO     | -- intersect: -12563091991.408356
[2024-06-23 07:45:03] 2024-06-23 11:44:41,683 | INFO     | intersect: -12563091991.408356
[2024-06-23 07:45:03] 2024-06-23 11:44:41,684 | INFO     | chi2: 2.98868100242273
[2024-06-23 07:45:03] 2024-06-23 11:44:41,684 | INFO     | current chi2=2.98868100242273 (change=47.31199444824146 %)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,684 | INFO     | model: linear, x: [1719122953.0, 1719123014.0, 1719123075.0, 1719123136.0, 1719123197.0, 1719123258.0, 1719123319.0, 1719123380.0, 1719123441.0, 1719123502.0, 1719
[2024-06-23 07:45:03] 2024-06-23 11:44:41,684 | INFO     | sum of square deviations: 11143384140.488
[2024-06-23 07:45:03] 2024-06-23 11:44:41,686 | INFO     | sum of deviations: 10924162285.966679
[2024-06-23 07:45:03] 2024-06-23 11:44:41,686 | INFO     | mean x: 1719132987.5060606
[2024-06-23 07:45:03] 2024-06-23 11:44:41,686 | INFO     | mean y: 2554246.7666666666
[2024-06-23 07:45:03] 2024-06-23 11:44:41,686 | INFO     | -- intersect: -1682758537.0258248
[2024-06-23 07:45:03] 2024-06-23 11:44:41,686 | INFO     | intersect: -1682758537.0258248
[2024-06-23 07:45:03] 2024-06-23 11:44:41,687 | INFO     | chi2: 1.3119788687224103
[2024-06-23 07:45:03] 2024-06-23 11:44:41,687 | INFO     | current chi2=1.3119788687224103 (change=56.10174295420375 %)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,687 | INFO     | model: linear, x: [1719123258.0, 1719123319.0, 1719123380.0, 1719123441.0, 1719123502.0, 1719123563.0, 1719123624.0, 1719123685.0, 1719123746.0, 1719123807.0, 1719
[2024-06-23 07:45:03] 2024-06-23 11:44:41,687 | INFO     | sum of square deviations: 10644499757.987694
[2024-06-23 07:45:03] 2024-06-23 11:44:41,689 | INFO     | sum of deviations: -22263752175.178467
[2024-06-23 07:45:03] 2024-06-23 11:44:41,689 | INFO     | mean x: 1719133140.0061538
[2024-06-23 07:45:03] 2024-06-23 11:44:41,689 | INFO     | mean y: 2564342.0892307693
[2024-06-23 07:45:03] 2024-06-23 11:44:41,689 | INFO     | -- intersect: 3598257428.230935
[2024-06-23 07:45:03] 2024-06-23 11:44:41,689 | INFO     | intersect: 3598257428.230935
[2024-06-23 07:45:03] 2024-06-23 11:44:41,690 | INFO     | chi2: 0.8373795938650064
[2024-06-23 07:45:03] 2024-06-23 11:44:41,690 | INFO     | current chi2=0.8373795938650064 (change=36.17430784686061 %)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,690 | INFO     | model: linear, x: [1719123563.0, 1719123624.0, 1719123685.0, 1719123746.0, 1719123807.0, 1719123868.0, 1719123929.0, 1719123990.0, 1719124051.0, 1719124112.0, 1719
[2024-06-23 07:45:03] 2024-06-23 11:44:41,690 | INFO     | sum of square deviations: 10160731937.987404
[2024-06-23 07:45:03] 2024-06-23 11:44:41,692 | INFO     | sum of deviations: -26983930696.656353
[2024-06-23 07:45:03] 2024-06-23 11:44:41,692 | INFO     | mean x: 1719133292.50625
[2024-06-23 07:45:03] 2024-06-23 11:44:41,692 | INFO     | mean y: 2565814.078125
[2024-06-23 07:45:03] 2024-06-23 11:44:41,692 | INFO     | -- intersect: 4568080769.735133
[2024-06-23 07:45:03] 2024-06-23 11:44:41,692 | INFO     | intersect: 4568080769.735133
[2024-06-23 07:45:03] 2024-06-23 11:44:41,693 | INFO     | chi2: 0.8163255874744839
[2024-06-23 07:45:03] 2024-06-23 11:44:41,693 | INFO     | current chi2=0.8163255874744839 (change=2.514272684069797 %)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,693 | INFO     | left removable region: 40
[2024-06-23 07:45:03] 2024-06-23 11:44:41,693 | INFO     | model: linear, x: [1719124783.0, 1719124844.0, 1719124905.0, 1719124966.0, 1719125027.0, 1719125088.0, 1719125149.0, 1719125210.0, 1719125271.0, 1719125332.0, 1719
[2024-06-23 07:45:03] 2024-06-23 11:44:41,693 | INFO     | sum of square deviations: 7879822347.48643
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | sum of deviations: 6644744685.812928
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | mean x: 1719133719.5068028
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | mean y: 2568822.343537415
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | -- intersect: -1447109120.0200372
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | intersect: -1447109120.0200372
[2024-06-23 07:45:03] 2024-06-23 11:44:41,695 | INFO     | chi2: 0.0004024216362209272
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | -- intersect: -1447109120.0200372
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | current memory leak: 0.84 B/s (using 294 data points, chi2=0.00)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | ..............................
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | . Timing measurements:
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | . get job = 0 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,696 | INFO     | . initial setup = 1 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | . payload setup = 4 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | . stage-in = 0 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | . payload execution = 20715 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | . stage-out = 2 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | . log creation = 0 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,697 | INFO     | ..............................
[2024-06-23 07:45:03] 2024-06-23 11:44:41,780 | INFO     | 
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | job summary report
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | --------------------------------------------------
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | PanDA job id: 6241914246
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | task id: 38921001
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | errors: (none)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | pilot state: finished 
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | transexitcode: 0
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | exeerrorcode: 0
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | exeerrordiag: 
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | exitcode: 0
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | exitmsg: OK
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | cpuconsumptiontime: 106501 s
[2024-06-23 07:45:03] 2024-06-23 11:44:41,781 | INFO     | nevents: 400
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | neventsw: 0
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | pid: 44397
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | pgrp: 44397
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | corecount: 8
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | event service: False
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | sizes: {0: 2386962, 1: 2387161, 4: 2387367, 11: 2387395, 20722: 2420611, 20725: 2429571, 20728: 2429755, 20746: 2429925}
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | --------------------------------------------------
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | 
[2024-06-23 07:45:03] 2024-06-23 11:44:41,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-23 07:45:03] 2024-06-23 11:44:41,882 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,883 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,883 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | job 6241914246 has completed (purged errors)
[2024-06-23 07:45:03] 2024-06-23 11:44:41,885 | INFO     | overall cleanup function is called
[2024-06-23 07:45:03] 2024-06-23 11:44:42,920 | INFO     | --- collectZombieJob: --- 10, [44397]
[2024-06-23 07:45:03] 2024-06-23 11:44:42,920 | INFO     | zombie collector waiting for pid 44397
[2024-06-23 07:45:03] 2024-06-23 11:44:42,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 07:45:03] 2024-06-23 11:44:43,928 | INFO     | collected zombie processes
[2024-06-23 07:45:03] 2024-06-23 11:44:43,928 | INFO     | will now attempt to kill all subprocesses of pid=44397
[2024-06-23 07:45:03] 2024-06-23 11:44:44,065 | INFO     | process IDs to be killed: [44397] (in reverse order)
[2024-06-23 07:45:03] 2024-06-23 11:44:44,162 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 07:45:03] 2024-06-23 11:44:44,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 07:45:03] 2024-06-23 11:44:44,170 | INFO     | did not find any defunct processes belonging to 44397
[2024-06-23 07:45:03] 2024-06-23 11:44:44,176 | INFO     | did not find any defunct processes belonging to 44397
[2024-06-23 07:45:03] 2024-06-23 11:44:44,176 | INFO     | ready for new job
[2024-06-23 07:45:03] 2024-06-23 11:44:44,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 07:45:03] 2024-06-23 11:44:44,178 | INFO     | *************************************
[2024-06-23 07:45:03] 2024-06-23 11:44:44,178 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 07:45:03] 2024-06-23 11:44:44,178 | INFO     | *************************************
[2024-06-23 07:45:03] 2024-06-23 11:44:44,178 | INFO     | 
[2024-06-23 07:45:03] 2024-06-23 11:44:44,182 | INFO     | architecture information:
[2024-06-23 07:45:03] 2024-06-23 11:44:44,183 | INFO     | executing command: cat /etc/os-release
[2024-06-23 07:45:03] 2024-06-23 11:44:44,297 | INFO     | cat /etc/os-release:
[2024-06-23 07:45:03] NAME="CentOS Linux"
[2024-06-23 07:45:03] VERSION="7 (Core)"
[2024-06-23 07:45:03] ID="centos"
[2024-06-23 07:45:03] ID_LIKE="rhel fedora"
[2024-06-23 07:45:03] VERSION_ID="7"
[2024-06-23 07:45:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 07:45:03] ANSI_COLOR="0;31"
[2024-06-23 07:45:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 07:45:03] HOME_URL="https://www.centos.org/"
[2024-06-23 07:45:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 07:45:03] 
[2024-06-23 07:45:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 07:45:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 07:45:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 07:45:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 07:45:03] 
[2024-06-23 07:45:03] 2024-06-23 11:44:44,297 | INFO     | *************************************
[2024-06-23 07:45:03] 2024-06-23 11:44:44,800 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | INFO     | sufficient remaining disk space (104374206464 B)
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 07:45:03] 2024-06-23 11:44:44,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 07:45:03] 2024-06-23 11:44:44,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 07:45:03] 2024-06-23 11:44:44,938 | INFO     | all data control threads have been joined
[2024-06-23 07:45:03] 2024-06-23 11:44:44,988 | INFO     | all payload control threads have been joined
[2024-06-23 07:45:03] 2024-06-23 11:44:45,148 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-23 07:45:03] 2024-06-23 11:44:45,148 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-23 07:45:03] 2024-06-23 11:44:45,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 07:45:03] 2024-06-23 11:44:45,149 | INFO     | will abort loop
[2024-06-23 07:45:03] 2024-06-23 11:44:45,251 | INFO     | all job control threads have been joined
[2024-06-23 07:45:03] 2024-06-23 11:44:45,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 07:45:03] 2024-06-23 11:44:45,923 | INFO     | [job] retrieve thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:45,944 | INFO     | [data] control thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:45,994 | INFO     | [payload] control thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,014 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,108 | INFO     | [payload] validate_post thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,154 | INFO     | [job] job monitor thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,253 | INFO     | [job] control thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,336 | INFO     | [job] validate thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,454 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:46,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 07:45:03] 2024-06-23 11:44:47,014 | INFO     | [data] copytool_in thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:47,098 | INFO     | [payload] failed_post thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:47,378 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:47,458 | INFO     | [data] copytool_out thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:47,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 07:45:03] 2024-06-23 11:44:47,804 | INFO     | [job] queue monitor thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:51,479 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:55,671 | INFO     | job.realtimelogging is not enabled
[2024-06-23 07:45:03] 2024-06-23 11:44:56,677 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 07:45:03] 2024-06-23 11:44:57,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145349080896)>', '<ExcThread(monitor, started 140144774473472)>']
[2024-06-23 07:45:03] 2024-06-23 11:44:57,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 07:45:03] 2024-06-23 11:44:57,998 | INFO     | [monitor] control thread has ended
[2024-06-23 07:45:03] 2024-06-23 11:45:02,700 | INFO     | all workflow threads have been joined
[2024-06-23 07:45:03] 2024-06-23 11:45:02,700 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 07:45:03] 2024-06-23 11:45:02,704 | INFO     | traces error code: 0
[2024-06-23 07:45:03] 2024-06-23 11:45:02,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 07:45:03] 2024-06-23 11:45:03,022 [wrapper] ==== pilot stdout END ====
[2024-06-23 07:45:03] 2024-06-23 11:45:03,035 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 07:45:03] 2024-06-23 11:45:03,038 [wrapper] pilotpid: 31716
[2024-06-23 07:45:03] 2024-06-23 11:45:03,046 [wrapper] Pilot exit status: 0
[2024-06-23 07:45:03] 2024-06-23 11:45:03,198 [wrapper] pandaids: 6241914246
[2024-06-23 07:45:03] 2024-06-23 11:45:03,431 [wrapper] cleanup supervisor_pilot 58740 31717
[2024-06-23 07:45:03] 2024-06-23 11:45:03,434 [wrapper] Test setup, not cleaning
[2024-06-23 07:45:03] 2024-06-23 11:45:03,436 [wrapper] ==== wrapper stdout END ====
[2024-06-23 07:45:03] 2024-06-23 11:45:03,464 [wrapper] ==== wrapper stderr END ====
[2024-06-23 07:45:03] 2024-06-23 11:45:03,511 [wrapper] apfmon messages muted
[2024-06-23 07:45:03]  *** Error codes and diagnostics ***
[2024-06-23 07:45:03]     "exeErrorCode": 0,
[2024-06-23 07:45:03]     "exeErrorDiag": "",
[2024-06-23 07:45:03]     "pilotErrorCode": 0,
[2024-06-23 07:45:03]     "pilotErrorDiag": "",
[2024-06-23 07:45:03]  *** Listing of results directory ***
[2024-06-23 07:45:03] total 952632
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas    469766 Jun 23 01:49 pilot3.tar.gz
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas      5654 Jun 23 01:55 queuedata.json
[2024-06-23 07:45:03] -rwx------ 1 boincer umatlas     32308 Jun 23 01:57 runpilot2-wrapper.sh
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas       100 Jun 23 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 07:45:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun 23 01:58 run_atlas
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas       105 Jun 23 01:58 job.xml
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas 614558265 Jun 23 01:58 EVNT.38776190._000621.pool.root.1
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 01:58 start_atlas.sh
[2024-06-23 07:45:03] drwxrwx--x 2 boincer umatlas      4096 Jun 23 01:58 shared
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas    482546 Jun 23 01:58 input.tar.gz
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas         0 Jun 23 01:58 boinc_lockfile
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas      2655 Jun 23 01:58 pandaJob.out
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas       424 Jun 23 01:58 setup.sh.local
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas   1025270 Jun 23 01:58 agis_schedconf.cvmfs.json
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas   1321363 Jun 23 01:58 cric_ddmendpoints.json
[2024-06-23 07:45:03] drwx------ 4 boincer umatlas      4096 Jun 23 01:58 pilot3
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas      6304 Jun 23 07:38 init_data.xml
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas 352201414 Jun 23 07:43 HITS.38921001._065194.pool.root.1
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas       533 Jun 23 07:43 boinc_task_state.xml
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas        95 Jun 23 07:44 pilot_heartbeat.json
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas      1093 Jun 23 07:44 memory_monitor_summary.json
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas         0 Jun 23 07:44 agis_ddmendpoints.agis.ALL.json
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas    481244 Jun 23 07:44 log.38921001._065194.job.log.tgz.1
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas      7770 Jun 23 07:44 heartbeat.json
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas      8192 Jun 23 07:44 boinc_mmap_file
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas        29 Jun 23 07:44 wrapper_checkpoint.txt
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas      4593 Jun 23 07:45 pilotlog.txt
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas   2116113 Jun 23 07:45 log.38921001._065194.job.log.1
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas       357 Jun 23 07:45 output.list
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas       620 Jun 23 07:45 runtime_log
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas   2621440 Jun 23 07:45 result.tar.gz
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas     11000 Jun 23 07:45 runtime_log.err
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas       654 Jun 23 07:45 9bQMDm3OVf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmF8nKDmZKLIrm.diag
[2024-06-23 07:45:03] -rw-r--r-- 1 boincer umatlas     21547 Jun 23 07:45 stderr.txt
[2024-06-23 07:45:03] HITS file was successfully produced:
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas 352201414 Jun 23 07:43 shared/HITS.pool.root.1
[2024-06-23 07:45:03]  *** Contents of shared directory: ***
[2024-06-23 07:45:03] total 947164
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas 614558265 Jun 23 01:58 ATLAS.root_0
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas     17537 Jun 23 01:58 start_atlas.sh
[2024-06-23 07:45:03] -rw-r--r-- 2 boincer umatlas    482546 Jun 23 01:58 input.tar.gz
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas 352201414 Jun 23 07:43 HITS.pool.root.1
[2024-06-23 07:45:03] -rw------- 1 boincer umatlas   2621440 Jun 23 07:45 result.tar.gz
07:45:05 (26979): run_atlas exited; CPU time 105172.209070
07:45:05 (26979): called boinc_finish(0)

</stderr_txt>
]]>

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