Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:28:24 (13378): wrapper (7.7.26015): starting
23:28:24 (13378): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 23:28:24] Arguments: --nthreads 8
[2024-06-22 23:28:24] Threads: 8
[2024-06-22 23:28:24] Checking for CVMFS
[2024-06-22 23:28:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 23:28:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 23:28:24] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 23:28:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 23:28:25] 2.11.2.0 95880 24905 138448 134187 2 70 15760360 18432000 12099 130560 0 7070753 99.526 5865467 50956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 23:28:25] CVMFS is ok
[2024-06-22 23:28:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 23:28:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 23:28:25] Further information can be found at the LHC@home message board.
[2024-06-22 23:28:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 23:28:25] Checking for apptainer binary...
[2024-06-22 23:28:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 23:28:25] Running /usr/bin/apptainer --version
[2024-06-22 23:28:25] apptainer version 1.3.1-1.el7
[2024-06-22 23:28:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 23:28:25] c-212-9.aglt2.org
[2024-06-22 23:28:25] apptainer works
[2024-06-22 23:28:25] Set ATHENA_PROC_NUMBER=8
[2024-06-22 23:28:25] Set ATHENA_CORE_NUMBER=8
[2024-06-22 23:28:25] Starting ATLAS job with PandaID=6241842599
[2024-06-22 23:28:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 04:47:41]  *** The last 200 lines of the pilot log: ***
[2024-06-23 04:47:41] 2024-06-23 08:47:17,248 | INFO     | model: linear, x: [1719113974.0, 1719114035.0, 1719114096.0, 1719114157.0, 1719114218.0, 1719114279.0, 1719114340.0, 1719114401.0, 1719114462.0, 1719114523.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,248 | INFO     | sum of square deviations: 8540743927.486724
[2024-06-23 04:47:41] 2024-06-23 08:47:17,250 | INFO     | sum of deviations: 80228617765.79477
[2024-06-23 04:47:41] 2024-06-23 08:47:17,250 | INFO     | mean x: 1719123154.5066226
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | mean y: 2536367.6026490065
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | -- intersect: -16146276385.272568
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | intersect: -16146276385.272568
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | chi2: 0.972970248175522
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | current chi2=0.972970248175522 (change=65.05201407902746 %)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,251 | INFO     | model: linear, x: [1719114279.0, 1719114340.0, 1719114401.0, 1719114462.0, 1719114523.0, 1719114584.0, 1719114645.0, 1719114706.0, 1719114767.0, 1719114828.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,252 | INFO     | sum of square deviations: 8123516889.986563
[2024-06-23 04:47:41] 2024-06-23 08:47:17,253 | INFO     | sum of deviations: 35912902789.451195
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | mean x: 1719123307.006734
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | mean y: 2552494.7744107745
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | -- intersect: -7597445023.999114
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | intersect: -7597445023.999114
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | chi2: 0.10511459105218772
[2024-06-23 04:47:41] 2024-06-23 08:47:17,254 | INFO     | current chi2=0.10511459105218772 (change=89.19652566465473 %)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,255 | INFO     | model: linear, x: [1719114584.0, 1719114645.0, 1719114706.0, 1719114767.0, 1719114828.0, 1719114889.0, 1719114950.0, 1719115011.0, 1719115072.0, 1719115133.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,255 | INFO     | sum of square deviations: 7720104064.986256
[2024-06-23 04:47:41] 2024-06-23 08:47:17,256 | INFO     | sum of deviations: 18576060588.684933
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | mean x: 1719123459.5068493
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | mean y: 2559048.657534247
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | -- intersect: -4133983836.5691996
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | intersect: -4133983836.5691996
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | chi2: 0.005219711539360802
[2024-06-23 04:47:41] 2024-06-23 08:47:17,257 | INFO     | current chi2=0.005219711539360802 (change=95.03426547436283 %)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,258 | INFO     | model: linear, x: [1719114889.0, 1719114950.0, 1719115011.0, 1719115072.0, 1719115133.0, 1719115194.0, 1719115255.0, 1719115316.0, 1719115377.0, 1719115438.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,258 | INFO     | sum of square deviations: 7330272889.986066
[2024-06-23 04:47:41] 2024-06-23 08:47:17,259 | INFO     | sum of deviations: 15662993555.07317
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | mean x: 1719123612.0069687
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | mean y: 2560185.463414634
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | -- intersect: -3670784921.786807
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | intersect: -3670784921.786807
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | chi2: 0.0033632686229268264
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | current chi2=0.0033632686229268264 (change=35.5660059456334 %)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,260 | INFO     | model: linear, x: [1719115194.0, 1719115255.0, 1719115316.0, 1719115377.0, 1719115438.0, 1719115499.0, 1719115560.0, 1719115621.0, 1719115682.0, 1719115743.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,261 | INFO     | sum of square deviations: 6953790802.485806
[2024-06-23 04:47:41] 2024-06-23 08:47:17,262 | INFO     | sum of deviations: 14766203739.960985
[2024-06-23 04:47:41] 2024-06-23 08:47:17,262 | INFO     | mean x: 1719123764.5070922
[2024-06-23 04:47:41] 2024-06-23 08:47:17,262 | INFO     | mean y: 2560547.769503546
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | -- intersect: -3647956484.155868
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | intersect: -3647956484.155868
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | chi2: 0.0033262278647753062
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | current chi2=0.0033262278647753062 (change=1.1013321356200838 %)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | left removable region: 60
[2024-06-23 04:47:41] 2024-06-23 08:47:17,263 | INFO     | model: linear, x: [1719117024.0, 1719117085.0, 1719117146.0, 1719117207.0, 1719117268.0, 1719117329.0, 1719117390.0, 1719117451.0, 1719117512.0, 1719117573.0, 1719
[2024-06-23 04:47:41] 2024-06-23 08:47:17,264 | INFO     | sum of square deviations: 4616132881.483766
[2024-06-23 04:47:41] 2024-06-23 08:47:17,265 | INFO     | sum of deviations: 12409677982.231714
[2024-06-23 04:47:41] 2024-06-23 08:47:17,265 | INFO     | mean x: 1719124496.50813
[2024-06-23 04:47:41] 2024-06-23 08:47:17,265 | INFO     | mean y: 2560999.1341463416
[2024-06-23 04:47:41] 2024-06-23 08:47:17,265 | INFO     | -- intersect: -4619009038.11634
[2024-06-23 04:47:41] 2024-06-23 08:47:17,265 | INFO     | intersect: -4619009038.11634
[2024-06-23 04:47:41] 2024-06-23 08:47:17,266 | INFO     | chi2: 0.0004392869240769563
[2024-06-23 04:47:41] 2024-06-23 08:47:17,266 | INFO     | -- intersect: -4619009038.11634
[2024-06-23 04:47:41] 2024-06-23 08:47:17,266 | INFO     | current memory leak: 2.69 B/s (using 246 data points, chi2=0.00)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | ..............................
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . Timing measurements:
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . get job = 0 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . initial setup = 1 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . payload setup = 6 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . stage-in = 0 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . payload execution = 19037 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . stage-out = 2 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | . log creation = 0 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,267 | INFO     | ..............................
[2024-06-23 04:47:41] 2024-06-23 08:47:17,356 | INFO     | 
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | job summary report
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | --------------------------------------------------
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | PanDA job id: 6241842599
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | task id: 38921007
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | errors: (none)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 04:47:41] 2024-06-23 08:47:17,357 | INFO     | pilot state: finished 
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | transexitcode: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | exeerrorcode: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | exeerrordiag: 
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | exitcode: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | exitmsg: OK
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | cpuconsumptiontime: 118836 s
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | nevents: 400
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | neventsw: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:17,358 | INFO     | pid: 38292
[2024-06-23 04:47:41] 2024-06-23 08:47:17,362 | INFO     | pgrp: 38292
[2024-06-23 04:47:41] 2024-06-23 08:47:17,362 | INFO     | corecount: 8
[2024-06-23 04:47:41] 2024-06-23 08:47:17,362 | INFO     | event service: False
[2024-06-23 04:47:41] 2024-06-23 08:47:17,362 | INFO     | sizes: {0: 2386888, 1: 2387087, 8: 2387293, 11: 2387321, 19048: 2420028, 19051: 2428988, 19053: 2429172, 19089: 2429342}
[2024-06-23 04:47:41] 2024-06-23 08:47:17,362 | INFO     | --------------------------------------------------
[2024-06-23 04:47:41] 2024-06-23 08:47:17,363 | INFO     | 
[2024-06-23 04:47:41] 2024-06-23 08:47:17,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-23 04:47:41] 2024-06-23 08:47:17,568 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,568 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,568 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,568 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,570 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 04:47:41] 2024-06-23 08:47:17,570 | INFO     | job 6241842599 has completed (purged errors)
[2024-06-23 04:47:41] 2024-06-23 08:47:17,570 | INFO     | overall cleanup function is called
[2024-06-23 04:47:41] 2024-06-23 08:47:18,581 | INFO     | --- collectZombieJob: --- 10, [38292]
[2024-06-23 04:47:41] 2024-06-23 08:47:18,582 | INFO     | zombie collector waiting for pid 38292
[2024-06-23 04:47:41] 2024-06-23 08:47:18,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 04:47:41] 2024-06-23 08:47:19,587 | INFO     | collected zombie processes
[2024-06-23 04:47:41] 2024-06-23 08:47:19,588 | INFO     | will now attempt to kill all subprocesses of pid=38292
[2024-06-23 04:47:41] 2024-06-23 08:47:20,161 | INFO     | process IDs to be killed: [38292] (in reverse order)
[2024-06-23 04:47:41] 2024-06-23 08:47:20,703 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 04:47:41] 2024-06-23 08:47:20,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 04:47:41] 2024-06-23 08:47:20,726 | INFO     | did not find any defunct processes belonging to 38292
[2024-06-23 04:47:41] 2024-06-23 08:47:20,748 | INFO     | did not find any defunct processes belonging to 38292
[2024-06-23 04:47:41] 2024-06-23 08:47:20,749 | INFO     | ready for new job
[2024-06-23 04:47:41] 2024-06-23 08:47:20,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 04:47:41] 2024-06-23 08:47:20,751 | INFO     | *************************************
[2024-06-23 04:47:41] 2024-06-23 08:47:20,751 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 04:47:41] 2024-06-23 08:47:20,751 | INFO     | *************************************
[2024-06-23 04:47:41] 2024-06-23 08:47:20,751 | INFO     | 
[2024-06-23 04:47:41] 2024-06-23 08:47:20,763 | INFO     | architecture information:
[2024-06-23 04:47:41] 2024-06-23 08:47:20,771 | INFO     | executing command: cat /etc/os-release
[2024-06-23 04:47:41] 2024-06-23 08:47:20,934 | INFO     | cat /etc/os-release:
[2024-06-23 04:47:41] NAME="CentOS Linux"
[2024-06-23 04:47:41] VERSION="7 (Core)"
[2024-06-23 04:47:41] ID="centos"
[2024-06-23 04:47:41] ID_LIKE="rhel fedora"
[2024-06-23 04:47:41] VERSION_ID="7"
[2024-06-23 04:47:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 04:47:41] ANSI_COLOR="0;31"
[2024-06-23 04:47:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 04:47:41] HOME_URL="https://www.centos.org/"
[2024-06-23 04:47:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 04:47:41] 
[2024-06-23 04:47:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 04:47:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 04:47:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 04:47:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 04:47:41] 
[2024-06-23 04:47:41] 2024-06-23 08:47:20,934 | INFO     | *************************************
[2024-06-23 04:47:41] 2024-06-23 08:47:21,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-23 04:47:41] 2024-06-23 08:47:21,562 | INFO     | sufficient remaining disk space (104554561536 B)
[2024-06-23 04:47:41] 2024-06-23 08:47:21,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 04:47:41] 2024-06-23 08:47:21,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 04:47:41] 2024-06-23 08:47:21,563 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 04:47:41] 2024-06-23 08:47:21,563 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 04:47:41] 2024-06-23 08:47:21,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 04:47:41] 2024-06-23 08:47:21,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 04:47:41] 2024-06-23 08:47:21,905 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-23 04:47:41] 2024-06-23 08:47:21,906 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-23 04:47:41] 2024-06-23 08:47:21,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 04:47:41] 2024-06-23 08:47:21,906 | INFO     | will abort loop
[2024-06-23 04:47:41] 2024-06-23 08:47:21,980 | INFO     | all data control threads have been joined
[2024-06-23 04:47:41] 2024-06-23 08:47:22,072 | INFO     | all payload control threads have been joined
[2024-06-23 04:47:41] 2024-06-23 08:47:22,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 04:47:41] 2024-06-23 08:47:22,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 04:47:41] 2024-06-23 08:47:22,567 | INFO     | [job] retrieve thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:22,716 | INFO     | [job] validate thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:22,720 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:22,912 | INFO     | [job] job monitor thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:22,986 | INFO     | [data] control thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,032 | INFO     | all job control threads have been joined
[2024-06-23 04:47:41] 2024-06-23 08:47:23,035 | INFO     | [payload] failed_post thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,080 | INFO     | [payload] control thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,317 | INFO     | [data] copytool_in thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 04:47:41] 2024-06-23 08:47:23,365 | INFO     | [job] queue monitor thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,946 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:23,981 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:24,038 | INFO     | [job] control thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:24,089 | INFO     | [data] copytool_out thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:24,100 | INFO     | [payload] validate_post thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:27,360 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:32,331 | INFO     | job.realtimelogging is not enabled
[2024-06-23 04:47:41] 2024-06-23 08:47:33,337 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 04:47:41] 2024-06-23 08:47:34,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814779189056)>', '<ExcThread(monitor, started 139814563141376)>']
[2024-06-23 04:47:41] 2024-06-23 08:47:35,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 04:47:41] 2024-06-23 08:47:35,649 | INFO     | [monitor] control thread has ended
[2024-06-23 04:47:41] 2024-06-23 08:47:39,717 | INFO     | all workflow threads have been joined
[2024-06-23 04:47:41] 2024-06-23 08:47:39,718 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 04:47:41] 2024-06-23 08:47:39,718 | INFO     | traces error code: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:39,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 04:47:41] 2024-06-23 08:47:40,016 [wrapper] ==== pilot stdout END ====
[2024-06-23 04:47:41] 2024-06-23 08:47:40,073 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 04:47:41] 2024-06-23 08:47:40,116 [wrapper] pilotpid: 22046
[2024-06-23 04:47:41] 2024-06-23 08:47:40,161 [wrapper] Pilot exit status: 0
[2024-06-23 04:47:41] 2024-06-23 08:47:40,316 [wrapper] pandaids: 6241842599
[2024-06-23 04:47:41] 2024-06-23 08:47:40,419 [wrapper] cleanup supervisor_pilot 53225 22047
[2024-06-23 04:47:41] 2024-06-23 08:47:40,456 [wrapper] Test setup, not cleaning
[2024-06-23 04:47:41] 2024-06-23 08:47:40,493 [wrapper] ==== wrapper stdout END ====
[2024-06-23 04:47:41] 2024-06-23 08:47:40,539 [wrapper] ==== wrapper stderr END ====
[2024-06-23 04:47:41] 2024-06-23 08:47:40,584 [wrapper] apfmon messages muted
[2024-06-23 04:47:41]  *** Error codes and diagnostics ***
[2024-06-23 04:47:41]     "exeErrorCode": 0,
[2024-06-23 04:47:41]     "exeErrorDiag": "",
[2024-06-23 04:47:41]     "pilotErrorCode": 0,
[2024-06-23 04:47:41]     "pilotErrorDiag": "",
[2024-06-23 04:47:41]  *** Listing of results directory ***
[2024-06-23 04:47:41] total 931084
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 23:16 pilot3.tar.gz
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 23:26 queuedata.json
[2024-06-23 04:47:41] -rwx------ 1 boincer umatlas     32308 Jun 22 23:27 runpilot2-wrapper.sh
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas       100 Jun 22 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 04:47:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 23:28 run_atlas
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas       105 Jun 22 23:28 job.xml
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas 584783717 Jun 22 23:28 EVNT.38776201._000850.pool.root.1
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 23:28 start_atlas.sh
[2024-06-23 04:47:41] drwxrwx--x 2 boincer umatlas      4096 Jun 22 23:28 shared
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas    482533 Jun 22 23:28 input.tar.gz
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas         0 Jun 22 23:28 boinc_lockfile
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas      2631 Jun 22 23:28 pandaJob.out
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas       424 Jun 22 23:28 setup.sh.local
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas   1026054 Jun 22 23:28 agis_schedconf.cvmfs.json
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas   1321363 Jun 22 23:28 cric_ddmendpoints.json
[2024-06-23 04:47:41] drwx------ 4 boincer umatlas      4096 Jun 22 23:28 pilot3
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas      6304 Jun 23 04:45 init_data.xml
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas 360169348 Jun 23 04:45 HITS.38921007._054591.pool.root.1
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas       533 Jun 23 04:45 boinc_task_state.xml
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas      1089 Jun 23 04:46 memory_monitor_summary.json
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas         0 Jun 23 04:46 agis_ddmendpoints.agis.ALL.json
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas    466935 Jun 23 04:46 log.38921007._054591.job.log.tgz.1
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas        95 Jun 23 04:46 pilot_heartbeat.json
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas      7775 Jun 23 04:47 heartbeat.json
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas      8192 Jun 23 04:47 boinc_mmap_file
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas        29 Jun 23 04:47 wrapper_checkpoint.txt
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas      4593 Jun 23 04:47 pilotlog.txt
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas   2005393 Jun 23 04:47 log.38921007._054591.job.log.1
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas       357 Jun 23 04:47 output.list
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas       620 Jun 23 04:47 runtime_log
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas   2488320 Jun 23 04:47 result.tar.gz
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas     10995 Jun 23 04:47 runtime_log.err
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas       652 Jun 23 04:47 5jOLDmv3Sf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmi5nKDmwxqZ3m.diag
[2024-06-23 04:47:41] -rw-r--r-- 1 boincer umatlas     21693 Jun 23 04:47 stderr.txt
[2024-06-23 04:47:41] HITS file was successfully produced:
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas 360169348 Jun 23 04:45 shared/HITS.pool.root.1
[2024-06-23 04:47:41]  *** Contents of shared directory: ***
[2024-06-23 04:47:41] total 925740
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas 584783717 Jun 22 23:28 ATLAS.root_0
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 23:28 start_atlas.sh
[2024-06-23 04:47:41] -rw-r--r-- 2 boincer umatlas    482533 Jun 22 23:28 input.tar.gz
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas 360169348 Jun 23 04:45 HITS.pool.root.1
[2024-06-23 04:47:41] -rw------- 1 boincer umatlas   2488320 Jun 23 04:47 result.tar.gz
04:47:43 (13378): run_atlas exited; CPU time 117759.708216
04:47:43 (13378): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN