Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:44:30 (2579403): wrapper (7.7.26015): starting
20:44:30 (2579403): wrapper: running run_atlas (--nthreads 4)
[2024-06-25 20:44:30] Arguments: --nthreads 4
[2024-06-25 20:44:30] Threads: 4
[2024-06-25 20:44:30] Checking for CVMFS
[2024-06-25 20:44:30] No cvmfs_config command found, will try listing directly
[2024-06-25 20:44:30] CVMFS is ok
[2024-06-25 20:44:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-25 20:44:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-25 20:44:30] Further information can be found at the LHC@home message board.
[2024-06-25 20:44:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-25 20:44:30] Checking for apptainer binary...
[2024-06-25 20:44:30] which: no apptainer in ((null))
[2024-06-25 20:44:30] apptainer is not installed, using version from CVMFS
[2024-06-25 20:44:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-25 20:44:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-06-25 20:44:30] apptainer works
[2024-06-25 20:44:30] Set ATHENA_PROC_NUMBER=4
[2024-06-25 20:44:30] Set ATHENA_CORE_NUMBER=4
[2024-06-25 20:44:30] Starting ATLAS job with PandaID=6241806293
[2024-06-25 20:44:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 05:10:58]  *** The last 200 lines of the pilot log: ***
[2024-06-26 05:10:58] 2024-06-26 03:10:41,209 | INFO     | fitting pss+swap vs Time
[2024-06-26 05:10:58] 2024-06-26 03:10:41,210 | INFO     | model: linear, x: [1719341099.0, 1719341160.0, 1719341221.0, 1719341282.0, 1719341343.0, 1719341404.0, 1719341465.0, 1719341526.0, 1719341587.0, 1719341648.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,210 | INFO     | sum of square deviations: 38296995264.5
[2024-06-26 05:10:58] 2024-06-26 03:10:41,216 | INFO     | sum of deviations: 183052925491.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,216 | INFO     | mean x: 1719356257.5
[2024-06-26 05:10:58] 2024-06-26 03:10:41,216 | INFO     | mean y: 2356871.425702811
[2024-06-26 05:10:58] 2024-06-26 03:10:41,216 | INFO     | -- intersect: -8215864707.654131
[2024-06-26 05:10:58] 2024-06-26 03:10:41,216 | INFO     | intersect: -8215864707.654131
[2024-06-26 05:10:58] 2024-06-26 03:10:41,217 | INFO     | chi2: 4.358541456175249
[2024-06-26 05:10:58] 2024-06-26 03:10:41,218 | INFO     | model: linear, x: [1719341099.0, 1719341160.0, 1719341221.0, 1719341282.0, 1719341343.0, 1719341404.0, 1719341465.0, 1719341526.0, 1719341587.0, 1719341648.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,218 | INFO     | sum of square deviations: 37155011062.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,223 | INFO     | sum of deviations: 212323923233.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,224 | INFO     | mean x: 1719356105.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,224 | INFO     | mean y: 2360746.4563894523
[2024-06-26 05:10:58] 2024-06-26 03:10:41,224 | INFO     | -- intersect: -9822974335.23795
[2024-06-26 05:10:58] 2024-06-26 03:10:41,224 | INFO     | intersect: -9822974335.23795
[2024-06-26 05:10:58] 2024-06-26 03:10:41,224 | INFO     | chi2: 3.6129914405831705
[2024-06-26 05:10:58] 2024-06-26 03:10:41,225 | INFO     | current chi2=3.6129914405831705 (change=17.105493273117133 %)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,225 | INFO     | right removable region: 492
[2024-06-26 05:10:58] 2024-06-26 03:10:41,225 | INFO     | model: linear, x: [1719341404.0, 1719341465.0, 1719341526.0, 1719341587.0, 1719341648.0, 1719341709.0, 1719341770.0, 1719341831.0, 1719341892.0, 1719341953.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,226 | INFO     | sum of square deviations: 37155011062.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,231 | INFO     | sum of deviations: 71600337464.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,231 | INFO     | mean x: 1719356410.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,231 | INFO     | mean y: 2371734.480730223
[2024-06-26 05:10:58] 2024-06-26 03:10:41,231 | INFO     | -- intersect: -3310949824.5268993
[2024-06-26 05:10:58] 2024-06-26 03:10:41,231 | INFO     | intersect: -3310949824.5268993
[2024-06-26 05:10:58] 2024-06-26 03:10:41,232 | INFO     | chi2: 2.181006268568166
[2024-06-26 05:10:58] 2024-06-26 03:10:41,232 | INFO     | current chi2=2.181006268568166 (change=49.960180704990606 %)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,232 | INFO     | model: linear, x: [1719341709.0, 1719341770.0, 1719341831.0, 1719341892.0, 1719341953.0, 1719342014.0, 1719342075.0, 1719342136.0, 1719342197.0, 1719342258.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,233 | INFO     | sum of square deviations: 36035957522.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | sum of deviations: -10531743970.499962
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | mean x: 1719356562.5
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | mean y: 2382926.973360656
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | -- intersect: 504876113.09708345
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | intersect: 504876113.09708345
[2024-06-26 05:10:58] 2024-06-26 03:10:41,238 | INFO     | chi2: 1.1095164513500033
[2024-06-26 05:10:58] 2024-06-26 03:10:41,239 | INFO     | current chi2=1.1095164513500033 (change=49.128231892776604 %)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,239 | INFO     | model: linear, x: [1719342014.0, 1719342075.0, 1719342136.0, 1719342197.0, 1719342258.0, 1719342319.0, 1719342380.0, 1719342441.0, 1719342502.0, 1719342563.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,239 | INFO     | sum of square deviations: 34939602082.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,244 | INFO     | sum of deviations: -32636854948.999996
[2024-06-26 05:10:58] 2024-06-26 03:10:41,244 | INFO     | mean x: 1719356715.0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,244 | INFO     | mean y: 2385978.8385093166
[2024-06-26 05:10:58] 2024-06-26 03:10:41,244 | INFO     | -- intersect: 1608425898.2786005
[2024-06-26 05:10:58] 2024-06-26 03:10:41,244 | INFO     | intersect: 1608425898.2786005
[2024-06-26 05:10:58] 2024-06-26 03:10:41,245 | INFO     | chi2: 0.8725962640056776
[2024-06-26 05:10:58] 2024-06-26 03:10:41,245 | INFO     | current chi2=0.8725962640056776 (change=21.353463218688944 %)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,245 | INFO     | left removable region: 30
[2024-06-26 05:10:58] 2024-06-26 03:10:41,245 | INFO     | model: linear, x: [1719342929.0, 1719342990.0, 1719343051.0, 1719343112.0, 1719343173.0, 1719343234.0, 1719343295.0, 1719343356.0, 1719343417.0, 1719343478.0, 1719
[2024-06-26 05:10:58] 2024-06-26 03:10:41,246 | INFO     | sum of square deviations: 30577524015.5
[2024-06-26 05:10:58] 2024-06-26 03:10:41,250 | INFO     | sum of deviations: 34152947393.499996
[2024-06-26 05:10:58] 2024-06-26 03:10:41,250 | INFO     | mean x: 1719356989.5
[2024-06-26 05:10:58] 2024-06-26 03:10:41,250 | INFO     | mean y: 2384867.816017316
[2024-06-26 05:10:58] 2024-06-26 03:10:41,250 | INFO     | -- intersect: -1918016168.6862776
[2024-06-26 05:10:58] 2024-06-26 03:10:41,250 | INFO     | intersect: -1918016168.6862776
[2024-06-26 05:10:58] 2024-06-26 03:10:41,251 | INFO     | chi2: 0.005713613242743164
[2024-06-26 05:10:58] 2024-06-26 03:10:41,251 | INFO     | -- intersect: -1918016168.6862776
[2024-06-26 05:10:58] 2024-06-26 03:10:41,251 | INFO     | current memory leak: 1.12 B/s (using 462 data points, chi2=0.01)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | ..............................
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . Timing measurements:
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . get job = 0 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . initial setup = 1 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . payload setup = 3 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . stage-in = 0 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . payload execution = 30335 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . stage-out = 1 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | . log creation = 0 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,252 | INFO     | ..............................
[2024-06-26 05:10:58] 2024-06-26 03:10:41,322 | WARNING  | process 2590559 is no longer using CPU - aborting
[2024-06-26 05:10:58] 2024-06-26 03:10:41,322 | INFO     | aborting job monitoring since job object (job id=6241806293) has expired
[2024-06-26 05:10:58] 2024-06-26 03:10:41,540 | INFO     | 
[2024-06-26 05:10:58] 2024-06-26 03:10:41,540 | INFO     | job summary report
[2024-06-26 05:10:58] 2024-06-26 03:10:41,540 | INFO     | --------------------------------------------------
[2024-06-26 05:10:58] 2024-06-26 03:10:41,540 | INFO     | PanDA job id: 6241806293
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | task id: 38921013
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | errors: (none)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | pilot state: finished 
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | transexitcode: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | exeerrorcode: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | exeerrordiag: 
[2024-06-26 05:10:58] 2024-06-26 03:10:41,541 | INFO     | exitcode: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | exitmsg: OK
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | cpuconsumptiontime: 117291 s
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | nevents: 400
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | neventsw: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | pid: 2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | pgrp: 2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | corecount: 4
[2024-06-26 05:10:58] 2024-06-26 03:10:41,542 | INFO     | event service: False
[2024-06-26 05:10:58] 2024-06-26 03:10:41,543 | INFO     | sizes: {0: 2387094, 3: 2387300, 11: 2387328, 30342: 2425544, 30344: 2434582, 30350: 2434696}
[2024-06-26 05:10:58] 2024-06-26 03:10:41,543 | INFO     | --------------------------------------------------
[2024-06-26 05:10:58] 2024-06-26 03:10:41,543 | INFO     | 
[2024-06-26 05:10:58] 2024-06-26 03:10:41,543 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-06-26 05:10:58] 2024-06-26 03:10:41,565 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,565 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,565 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,565 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,567 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 05:10:58] 2024-06-26 03:10:41,568 | INFO     | job 6241806293 has completed (purged errors)
[2024-06-26 05:10:58] 2024-06-26 03:10:41,568 | INFO     | overall cleanup function is called
[2024-06-26 05:10:58] 2024-06-26 03:10:42,576 | INFO     | --- collectZombieJob: --- 10, [2590559]
[2024-06-26 05:10:58] 2024-06-26 03:10:42,576 | INFO     | zombie collector waiting for pid 2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:42,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 05:10:58] 2024-06-26 03:10:43,582 | INFO     | collected zombie processes
[2024-06-26 05:10:58] 2024-06-26 03:10:43,582 | INFO     | will now attempt to kill all subprocesses of pid=2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:43,683 | INFO     | process IDs to be killed: [2590559] (in reverse order)
[2024-06-26 05:10:58] 2024-06-26 03:10:43,753 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 05:10:58] 2024-06-26 03:10:43,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 05:10:58] 2024-06-26 03:10:43,757 | INFO     | did not find any defunct processes belonging to 2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:43,760 | INFO     | did not find any defunct processes belonging to 2590559
[2024-06-26 05:10:58] 2024-06-26 03:10:43,760 | INFO     | ready for new job
[2024-06-26 05:10:58] 2024-06-26 03:10:43,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 05:10:58] 2024-06-26 03:10:43,762 | INFO     | *************************************
[2024-06-26 05:10:58] 2024-06-26 03:10:43,762 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 05:10:58] 2024-06-26 03:10:43,763 | INFO     | *************************************
[2024-06-26 05:10:58] 2024-06-26 03:10:43,763 | INFO     | 
[2024-06-26 05:10:58] 2024-06-26 03:10:43,764 | INFO     | architecture information:
[2024-06-26 05:10:58] 2024-06-26 03:10:43,765 | INFO     | executing command: cat /etc/os-release
[2024-06-26 05:10:58] 2024-06-26 03:10:43,777 | INFO     | cat /etc/os-release:
[2024-06-26 05:10:58] NAME="CentOS Linux"
[2024-06-26 05:10:58] VERSION="7 (Core)"
[2024-06-26 05:10:58] ID="centos"
[2024-06-26 05:10:58] ID_LIKE="rhel fedora"
[2024-06-26 05:10:58] VERSION_ID="7"
[2024-06-26 05:10:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 05:10:58] ANSI_COLOR="0;31"
[2024-06-26 05:10:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 05:10:58] HOME_URL="https://www.centos.org/"
[2024-06-26 05:10:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 05:10:58] 
[2024-06-26 05:10:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 05:10:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 05:10:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 05:10:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 05:10:58] 
[2024-06-26 05:10:58] 2024-06-26 03:10:43,777 | INFO     | *************************************
[2024-06-26 05:10:58] 2024-06-26 03:10:44,280 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-06-26 05:10:58] 2024-06-26 03:10:44,300 | INFO     | sufficient remaining disk space (1697621475328 B)
[2024-06-26 05:10:58] 2024-06-26 03:10:44,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 05:10:58] 2024-06-26 03:10:44,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 05:10:58] 2024-06-26 03:10:44,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 05:10:58] 2024-06-26 03:10:44,302 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-26 05:10:58] 2024-06-26 03:10:44,302 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 05:10:58] 2024-06-26 03:10:44,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 05:10:58] 2024-06-26 03:10:44,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 05:10:58] 2024-06-26 03:10:44,464 | INFO     | all data control threads have been joined
[2024-06-26 05:10:58] 2024-06-26 03:10:44,819 | INFO     | all payload control threads have been joined
[2024-06-26 05:10:58] 2024-06-26 03:10:44,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 05:10:58] 2024-06-26 03:10:44,831 | INFO     | aborting loop
[2024-06-26 05:10:58] 2024-06-26 03:10:45,306 | INFO     | [job] retrieve thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,408 | INFO     | [data] copytool_in thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,470 | INFO     | [data] control thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,587 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,588 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,595 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,722 | INFO     | all job control threads have been joined
[2024-06-26 05:10:58] 2024-06-26 03:10:45,820 | INFO     | [payload] control thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:45,836 | INFO     | [job] job monitor thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,307 | INFO     | [data] copytool_out thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 05:10:58] 2024-06-26 03:10:46,364 | INFO     | [payload] validate_post thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,436 | INFO     | [job] validate thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 05:10:58] 2024-06-26 03:10:46,669 | INFO     | [payload] failed_post thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,727 | INFO     | [job] control thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:46,739 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:47,334 | INFO     | [job] queue monitor thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:50,627 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 05:10:58] 2024-06-26 03:10:52,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47047740458048)>', '<ExcThread(monitor, started 47047927035648)>']
[2024-06-26 05:10:58] 2024-06-26 03:10:52,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 05:10:58] 2024-06-26 03:10:52,333 | INFO     | [monitor] control thread has ended
[2024-06-26 05:10:58] 2024-06-26 03:10:57,319 | INFO     | all workflow threads have been joined
[2024-06-26 05:10:58] 2024-06-26 03:10:57,319 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 05:10:58] 2024-06-26 03:10:57,320 | INFO     | traces error code: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:57,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 05:10:58] 2024-06-26 03:10:57,419 [wrapper] ==== pilot stdout END ====
[2024-06-26 05:10:58] 2024-06-26 03:10:57,423 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 05:10:58] 2024-06-26 03:10:57,426 [wrapper] pilotpid: 2583642
[2024-06-26 05:10:58] 2024-06-26 03:10:57,429 [wrapper] Pilot exit status: 0
[2024-06-26 05:10:58] 2024-06-26 03:10:57,440 [wrapper] pandaids: 6241806293
[2024-06-26 05:10:58] 2024-06-26 03:10:57,483 [wrapper] cleanup supervisor_pilot 2975812 2583643
[2024-06-26 05:10:58] 2024-06-26 03:10:57,486 [wrapper] Test setup, not cleaning
[2024-06-26 05:10:58] 2024-06-26 03:10:57,489 [wrapper] ==== wrapper stdout END ====
[2024-06-26 05:10:58] 2024-06-26 03:10:57,492 [wrapper] ==== wrapper stderr END ====
[2024-06-26 05:10:58] 2024-06-26 03:10:57,498 [wrapper] apfmon messages muted
[2024-06-26 05:10:58]  *** Error codes and diagnostics ***
[2024-06-26 05:10:58]     "exeErrorCode": 0,
[2024-06-26 05:10:58]     "exeErrorDiag": "",
[2024-06-26 05:10:58]     "pilotErrorCode": 0,
[2024-06-26 05:10:58]     "pilotErrorDiag": "",
[2024-06-26 05:10:58]  *** Listing of results directory ***
[2024-06-26 05:10:58] total 883152
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc    469766 Jun 23 03:58 pilot3.tar.gz
[2024-06-26 05:10:58] -rwx------ 1 boinc boinc     32308 Jun 23 04:04 runpilot2-wrapper.sh
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc      5654 Jun 23 04:04 queuedata.json
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc       100 Jun 25 20:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 05:10:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 25 20:44 run_atlas
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc       105 Jun 25 20:44 job.xml
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc 543681485 Jun 25 20:44 EVNT.38776210._001016.pool.root.1
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc     17537 Jun 25 20:44 start_atlas.sh
[2024-06-26 05:10:58] drwxrwx--x 2 boinc boinc      4096 Jun 25 20:44 shared
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc    482523 Jun 25 20:44 input.tar.gz
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc      6455 Jun 25 20:44 init_data.xml
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc         0 Jun 25 20:44 boinc_lockfile
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc      2647 Jun 25 20:44 pandaJob.out
[2024-06-26 05:10:58] -rw------- 1 boinc boinc       424 Jun 25 20:44 setup.sh.local
[2024-06-26 05:10:58] -rw------- 1 boinc boinc   1033884 Jun 25 20:44 agis_schedconf.cvmfs.json
[2024-06-26 05:10:58] -rw------- 1 boinc boinc   1321363 Jun 25 20:44 cric_ddmendpoints.json
[2024-06-26 05:10:58] drwx------ 4 boinc boinc      4096 Jun 25 20:44 pilot3
[2024-06-26 05:10:58] -rw------- 1 boinc boinc        95 Jun 26 05:09 pilot_heartbeat.json
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc       532 Jun 26 05:09 boinc_task_state.xml
[2024-06-26 05:10:58] -rw------- 1 boinc boinc 349133982 Jun 26 05:09 HITS.38921013._054383.pool.root.1
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc      8192 Jun 26 05:10 boinc_mmap_file
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc        29 Jun 26 05:10 wrapper_checkpoint.txt
[2024-06-26 05:10:58] -rw------- 1 boinc boinc      1044 Jun 26 05:10 memory_monitor_summary.json
[2024-06-26 05:10:58] -rw------- 1 boinc boinc         0 Jun 26 05:10 agis_ddmendpoints.agis.ALL.json
[2024-06-26 05:10:58] -rw------- 1 boinc boinc    524055 Jun 26 05:10 log.38921013._054383.job.log.tgz.1
[2024-06-26 05:10:58] -rw------- 1 boinc boinc      7764 Jun 26 05:10 heartbeat.json
[2024-06-26 05:10:58] -rw------- 1 boinc boinc      4345 Jun 26 05:10 pilotlog.txt
[2024-06-26 05:10:58] -rw------- 1 boinc boinc   3469450 Jun 26 05:10 log.38921013._054383.job.log.1
[2024-06-26 05:10:58] -rw------- 1 boinc boinc       357 Jun 26 05:10 output.list
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc       620 Jun 26 05:10 runtime_log
[2024-06-26 05:10:58] -rw------- 1 boinc boinc   4014080 Jun 26 05:10 result.tar.gz
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc     11410 Jun 26 05:10 runtime_log.err
[2024-06-26 05:10:58] -rw------- 1 boinc boinc       660 Jun 26 05:10 A0UKDmklRf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmP4nKDmhJ4Ttm.diag
[2024-06-26 05:10:58] -rw-r--r-- 1 boinc boinc     21356 Jun 26 05:10 stderr.txt
[2024-06-26 05:10:58] HITS file was successfully produced:
[2024-06-26 05:10:58] -rw------- 1 boinc boinc 349133982 Jun 26 05:09 shared/HITS.pool.root.1
[2024-06-26 05:10:58]  *** Contents of shared directory: ***
[2024-06-26 05:10:58] total 876312
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc 543681485 Jun 25 20:44 ATLAS.root_0
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc     17537 Jun 25 20:44 start_atlas.sh
[2024-06-26 05:10:58] -rw-r--r-- 2 boinc boinc    482523 Jun 25 20:44 input.tar.gz
[2024-06-26 05:10:58] -rw------- 1 boinc boinc 349133982 Jun 26 05:09 HITS.pool.root.1
[2024-06-26 05:10:58] -rw------- 1 boinc boinc   4014080 Jun 26 05:10 result.tar.gz
05:10:59 (2579403): run_atlas exited; CPU time 117041.205245
05:10:59 (2579403): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN