Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:12:51 (79185): wrapper (7.7.26015): starting
20:12:51 (79185): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 20:12:51] Arguments: --nthreads 8
[2024-06-22 20:12:51] Threads: 8
[2024-06-22 20:12:51] Checking for CVMFS
[2024-06-22 20:12:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 20:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 20:12:52] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 20:12:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 20:12:52] 2.11.2.0 2604 17416 130656 134183 0 140 18249826 18432000 10931 130560 0 18025287 99.223 27060944 58859 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 20:12:52] CVMFS is ok
[2024-06-22 20:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 20:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 20:12:52] Further information can be found at the LHC@home message board.
[2024-06-22 20:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 20:12:52] Checking for apptainer binary...
[2024-06-22 20:12:52] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 20:12:52] Running /usr/bin/apptainer --version
[2024-06-22 20:12:52] apptainer version 1.3.1-1.el7
[2024-06-22 20:12:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 20:12:53] c-212-5.aglt2.org
[2024-06-22 20:12:53] apptainer works
[2024-06-22 20:12:53] Set ATHENA_PROC_NUMBER=8
[2024-06-22 20:12:53] Set ATHENA_CORE_NUMBER=8
[2024-06-22 20:12:53] Starting ATLAS job with PandaID=6241758084
[2024-06-22 20:12:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 01:27:47]  *** The last 200 lines of the pilot log: ***
[2024-06-23 01:27:47] 2024-06-23 05:27:22,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-23 01:27:47] 2024-06-23 05:27:22,132 | INFO     | job 6241758084 has state=finished
[2024-06-23 01:27:47] 2024-06-23 05:27:22,132 | INFO     | preparing for final server update for job 6241758084 in state='finished'
[2024-06-23 01:27:47] 2024-06-23 05:27:22,132 | INFO     | this job has now completed (state=finished)
[2024-06-23 01:27:47] 2024-06-23 05:27:22,133 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-23 01:27:47] 2024-06-23 05:27:22,133 | INFO     | job 6241758084 has finished - writing final server update
[2024-06-23 01:27:47] 2024-06-23 05:27:22,133 | INFO     | total number of processed events: 400 (read)
[2024-06-23 01:27:47] 2024-06-23 05:27:22,136 | INFO     | executing command: lscpu
[2024-06-23 01:27:47] 2024-06-23 05:27:22,176 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-23 01:27:47] 2024-06-23 05:27:22,177 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-23 01:27:47] 2024-06-23 05:27:22,204 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-23 01:27:47] 2024-06-23 05:27:24,185 | INFO     | monitor loop #1461: job 0:6241758084 is in state 'finished'
[2024-06-23 01:27:47] 2024-06-23 05:27:24,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,046 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-23 01:27:47] 2024-06-23 05:27:26,046 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6241758084/memory_monitor_summary.json (trf name=prmon)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,047 | INFO     | extracted standard info from prmon json
[2024-06-23 01:27:47] 2024-06-23 05:27:26,047 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 01:27:47] 2024-06-23 05:27:26,047 | WARNING  | GPU info not found in prmon json
[2024-06-23 01:27:47] 2024-06-23 05:27:26,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 01:27:47] 2024-06-23 05:27:26,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 01:27:47] 2024-06-23 05:27:26,050 | INFO     | fitting pss+swap vs Time
[2024-06-23 01:27:47] 2024-06-23 05:27:26,050 | INFO     | model: linear, x: [1719101623.0, 1719101684.0, 1719101745.0, 1719101806.0, 1719101867.0, 1719101928.0, 1719101989.0, 1719102050.0, 1719102111.0, 1719102172.0, 1719
[2024-06-23 01:27:47] 2024-06-23 05:27:26,050 | INFO     | sum of square deviations: 9148487810.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,051 | INFO     | sum of deviations: 416333075728.99994
[2024-06-23 01:27:47] 2024-06-23 05:27:26,051 | INFO     | mean x: 1719111017.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | mean y: 2381235.2944983817
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | -- intersect: -78231616786.20139
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | intersect: -78231616786.20139
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | chi2: 12.543371567617774
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | model: linear, x: [1719101623.0, 1719101684.0, 1719101745.0, 1719101806.0, 1719101867.0, 1719101928.0, 1719101989.0, 1719102050.0, 1719102111.0, 1719102172.0, 1719
[2024-06-23 01:27:47] 2024-06-23 05:27:26,052 | INFO     | sum of square deviations: 8711530780.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | sum of deviations: 429706887077.99994
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | mean x: 1719110864.5
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | mean y: 2385803.8486842103
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | -- intersect: -84794855551.50636
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | intersect: -84794855551.50636
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | chi2: 11.70956031476233
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | current chi2=11.70956031476233 (change=6.647425282433858 %)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | right removable region: 303
[2024-06-23 01:27:47] 2024-06-23 05:27:26,053 | INFO     | model: linear, x: [1719101928.0, 1719101989.0, 1719102050.0, 1719102111.0, 1719102172.0, 1719102233.0, 1719102294.0, 1719102355.0, 1719102416.0, 1719102477.0, 1719
[2024-06-23 01:27:47] 2024-06-23 05:27:26,054 | INFO     | sum of square deviations: 8711530780.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,054 | INFO     | sum of deviations: 332584644232.50006
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | mean x: 1719111169.5
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | mean y: 2410409.9638157897
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | -- intersect: -65628991365.818535
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | intersect: -65628991365.818535
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | chi2: 9.442973204712336
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | current chi2=9.442973204712336 (change=24.717424228342956 %)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | left removable region: 10
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | model: linear, x: [1719102233.0, 1719102294.0, 1719102355.0, 1719102416.0, 1719102477.0, 1719102538.0, 1719102599.0, 1719102660.0, 1719102721.0, 1719102782.0, 1719
[2024-06-23 01:27:47] 2024-06-23 05:27:26,055 | INFO     | sum of square deviations: 7799669962.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | sum of deviations: 283809062014.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | mean x: 1719111139.0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | mean y: 2438257.4368600682
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | -- intersect: -62551403409.51253
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | intersect: -62551403409.51253
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | chi2: 7.0992467474955685
[2024-06-23 01:27:47] 2024-06-23 05:27:26,056 | INFO     | -- intersect: -62551403409.51253
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | current memory leak: 36.39 B/s (using 293 data points, chi2=7.10)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | ..............................
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . Timing measurements:
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . get job = 0 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . initial setup = 2 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . payload setup = 8 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . stage-in = 0 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . payload execution = 18822 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . stage-out = 1 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | . log creation = 0 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,057 | INFO     | ..............................
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | 
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | job summary report
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | --------------------------------------------------
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | PanDA job id: 6241758084
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | task id: 38921013
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | errors: (none)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,548 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | pilot state: finished 
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | transexitcode: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | exeerrorcode: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | exeerrordiag: 
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | exitcode: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | exitmsg: OK
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | cpuconsumptiontime: 123633 s
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | nevents: 400
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | neventsw: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | pid: 91753
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | pgrp: 91753
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | corecount: 8
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | event service: False
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | sizes: {0: 2387033, 6: 2387239, 11: 2387267, 18834: 2420056, 18836: 2429016, 18837: 2429072, 18840: 2429370}
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | --------------------------------------------------
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | 
[2024-06-23 01:27:47] 2024-06-23 05:27:26,549 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-23 01:27:47] 2024-06-23 05:27:26,568 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,568 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,568 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,568 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,568 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,569 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,570 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 01:27:47] 2024-06-23 05:27:26,570 | INFO     | job 6241758084 has completed (purged errors)
[2024-06-23 01:27:47] 2024-06-23 05:27:26,570 | INFO     | overall cleanup function is called
[2024-06-23 01:27:47] 2024-06-23 05:27:27,578 | INFO     | --- collectZombieJob: --- 10, [91753]
[2024-06-23 01:27:47] 2024-06-23 05:27:27,578 | INFO     | zombie collector waiting for pid 91753
[2024-06-23 01:27:47] 2024-06-23 05:27:27,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 01:27:47] 2024-06-23 05:27:28,582 | INFO     | collected zombie processes
[2024-06-23 01:27:47] 2024-06-23 05:27:28,582 | INFO     | will now attempt to kill all subprocesses of pid=91753
[2024-06-23 01:27:47] 2024-06-23 05:27:28,710 | INFO     | process IDs to be killed: [91753] (in reverse order)
[2024-06-23 01:27:47] 2024-06-23 05:27:28,811 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 01:27:47] 2024-06-23 05:27:28,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 01:27:47] 2024-06-23 05:27:28,819 | INFO     | did not find any defunct processes belonging to 91753
[2024-06-23 01:27:47] 2024-06-23 05:27:28,826 | INFO     | did not find any defunct processes belonging to 91753
[2024-06-23 01:27:47] 2024-06-23 05:27:28,826 | INFO     | ready for new job
[2024-06-23 01:27:47] 2024-06-23 05:27:28,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 01:27:47] 2024-06-23 05:27:28,828 | INFO     | *************************************
[2024-06-23 01:27:47] 2024-06-23 05:27:28,828 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 01:27:47] 2024-06-23 05:27:28,828 | INFO     | *************************************
[2024-06-23 01:27:47] 2024-06-23 05:27:28,828 | INFO     | 
[2024-06-23 01:27:47] 2024-06-23 05:27:28,832 | INFO     | architecture information:
[2024-06-23 01:27:47] 2024-06-23 05:27:28,832 | INFO     | executing command: cat /etc/os-release
[2024-06-23 01:27:47] 2024-06-23 05:27:28,853 | INFO     | cat /etc/os-release:
[2024-06-23 01:27:47] NAME="CentOS Linux"
[2024-06-23 01:27:47] VERSION="7 (Core)"
[2024-06-23 01:27:47] ID="centos"
[2024-06-23 01:27:47] ID_LIKE="rhel fedora"
[2024-06-23 01:27:47] VERSION_ID="7"
[2024-06-23 01:27:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 01:27:47] ANSI_COLOR="0;31"
[2024-06-23 01:27:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 01:27:47] HOME_URL="https://www.centos.org/"
[2024-06-23 01:27:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 01:27:47] 
[2024-06-23 01:27:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 01:27:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 01:27:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 01:27:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 01:27:47] 
[2024-06-23 01:27:47] 2024-06-23 05:27:28,853 | INFO     | *************************************
[2024-06-23 01:27:47] 2024-06-23 05:27:29,354 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-23 01:27:47] 2024-06-23 05:27:29,371 | INFO     | sufficient remaining disk space (101810438144 B)
[2024-06-23 01:27:47] 2024-06-23 05:27:29,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 01:27:47] 2024-06-23 05:27:29,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 01:27:47] 2024-06-23 05:27:29,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 01:27:47] 2024-06-23 05:27:29,568 | INFO     | all job control threads have been joined
[2024-06-23 01:27:47] 2024-06-23 05:27:29,751 | INFO     | all data control threads have been joined
[2024-06-23 01:27:47] 2024-06-23 05:27:29,844 | INFO     | all payload control threads have been joined
[2024-06-23 01:27:47] 2024-06-23 05:27:30,040 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 01:27:47] 2024-06-23 05:27:30,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 01:27:47] 2024-06-23 05:27:30,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 01:27:47] 2024-06-23 05:27:30,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 01:27:47] 2024-06-23 05:27:30,199 | INFO     | aborting loop
[2024-06-23 01:27:47] 2024-06-23 05:27:30,377 | INFO     | [job] retrieve thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,471 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,486 | INFO     | [payload] validate_post thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,573 | INFO     | [job] control thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,756 | INFO     | [data] control thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,849 | INFO     | [payload] control thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,896 | INFO     | [job] validate thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:30,976 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:31,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 01:27:47] 2024-06-23 05:27:31,204 | INFO     | [job] job monitor thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:31,328 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:31,333 | INFO     | [payload] failed_post thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:31,414 | INFO     | [data] copytool_out thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:31,718 | INFO     | [data] copytool_in thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:32,110 | INFO     | [job] queue monitor thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:32,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 01:27:47] 2024-06-23 05:27:36,643 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:39,771 | INFO     | job.realtimelogging is not enabled
[2024-06-23 01:27:47] 2024-06-23 05:27:40,777 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 01:27:47] 2024-06-23 05:27:42,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139846280537920)>', '<ExcThread(monitor, started 139845972240128)>']
[2024-06-23 01:27:47] 2024-06-23 05:27:43,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 01:27:47] 2024-06-23 05:27:43,113 | INFO     | [monitor] control thread has ended
[2024-06-23 01:27:47] 2024-06-23 05:27:47,442 | INFO     | all workflow threads have been joined
[2024-06-23 01:27:47] 2024-06-23 05:27:47,442 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 01:27:47] 2024-06-23 05:27:47,442 | INFO     | traces error code: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:47,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 01:27:47] 2024-06-23 05:27:47,549 [wrapper] ==== pilot stdout END ====
[2024-06-23 01:27:47] 2024-06-23 05:27:47,552 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 01:27:47] 2024-06-23 05:27:47,554 [wrapper] pilotpid: 83921
[2024-06-23 01:27:47] 2024-06-23 05:27:47,556 [wrapper] Pilot exit status: 0
[2024-06-23 01:27:47] 2024-06-23 05:27:47,567 [wrapper] pandaids: 6241758084
[2024-06-23 01:27:47] 2024-06-23 05:27:47,607 [wrapper] cleanup supervisor_pilot   866 83922
[2024-06-23 01:27:47] 2024-06-23 05:27:47,609 [wrapper] Test setup, not cleaning
[2024-06-23 01:27:47] 2024-06-23 05:27:47,611 [wrapper] ==== wrapper stdout END ====
[2024-06-23 01:27:47] 2024-06-23 05:27:47,612 [wrapper] ==== wrapper stderr END ====
[2024-06-23 01:27:47] 2024-06-23 05:27:47,615 [wrapper] apfmon messages muted
[2024-06-23 01:27:47]  *** Error codes and diagnostics ***
[2024-06-23 01:27:47]     "exeErrorCode": 0,
[2024-06-23 01:27:47]     "exeErrorDiag": "",
[2024-06-23 01:27:47]     "pilotErrorCode": 0,
[2024-06-23 01:27:47]     "pilotErrorDiag": "",
[2024-06-23 01:27:47]  *** Listing of results directory ***
[2024-06-23 01:27:47] total 875180
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 19:53 pilot3.tar.gz
[2024-06-23 01:27:47] -rwx------ 1 boincer umatlas     32308 Jun 22 20:11 runpilot2-wrapper.sh
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 20:11 queuedata.json
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas       100 Jun 22 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 01:27:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 20:12 run_atlas
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas       105 Jun 22 20:12 job.xml
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 20:12 start_atlas.sh
[2024-06-23 01:27:47] drwxrwx--x 2 boincer umatlas      4096 Jun 22 20:12 shared
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas    482523 Jun 22 20:12 input.tar.gz
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas 542081817 Jun 22 20:12 EVNT.38776210._000991.pool.root.1
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas         0 Jun 22 20:12 boinc_lockfile
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas      2647 Jun 22 20:12 pandaJob.out
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas       467 Jun 22 20:12 setup.sh.local
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas   1025761 Jun 22 20:13 agis_schedconf.cvmfs.json
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas   1321363 Jun 22 20:13 cric_ddmendpoints.json
[2024-06-23 01:27:47] drwx------ 4 boincer umatlas      4096 Jun 22 20:13 pilot3
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas      6389 Jun 23 01:18 init_data.xml
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas 345947082 Jun 23 01:26 HITS.38921013._054310.pool.root.1
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas       532 Jun 23 01:26 boinc_task_state.xml
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas        95 Jun 23 01:26 pilot_heartbeat.json
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas      1090 Jun 23 01:27 memory_monitor_summary.json
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas         0 Jun 23 01:27 agis_ddmendpoints.agis.ALL.json
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas    466867 Jun 23 01:27 log.38921013._054310.job.log.tgz.1
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas      7763 Jun 23 01:27 heartbeat.json
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas        29 Jun 23 01:27 wrapper_checkpoint.txt
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas      8192 Jun 23 01:27 boinc_mmap_file
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas      4284 Jun 23 01:27 pilotlog.txt
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas   1843352 Jun 23 01:27 log.38921013._054310.job.log.1
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas       357 Jun 23 01:27 output.list
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas       620 Jun 23 01:27 runtime_log
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas   2324480 Jun 23 01:27 result.tar.gz
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas     11400 Jun 23 01:27 runtime_log.err
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas       650 Jun 23 01:27 6yIODmU0Pf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmElrKDm23Su3n.diag
[2024-06-23 01:27:47] -rw-r--r-- 1 boincer umatlas     21711 Jun 23 01:27 stderr.txt
[2024-06-23 01:27:47] HITS file was successfully produced:
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas 345947082 Jun 23 01:26 shared/HITS.pool.root.1
[2024-06-23 01:27:47]  *** Contents of shared directory: ***
[2024-06-23 01:27:47] total 869992
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 20:12 start_atlas.sh
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas    482523 Jun 22 20:12 input.tar.gz
[2024-06-23 01:27:47] -rw-r--r-- 2 boincer umatlas 542081817 Jun 22 20:12 ATLAS.root_0
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas 345947082 Jun 23 01:26 HITS.pool.root.1
[2024-06-23 01:27:47] -rw------- 1 boincer umatlas   2324480 Jun 23 01:27 result.tar.gz
01:27:49 (79185): run_atlas exited; CPU time 122959.408710
01:27:49 (79185): called boinc_finish(0)

</stderr_txt>
]]>

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