Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:58 (9657): wrapper (7.7.26015): starting
18:55:58 (9657): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 18:55:58] Arguments: --nthreads 8
[2024-06-22 18:55:58] Threads: 8
[2024-06-22 18:55:58] Checking for CVMFS
[2024-06-22 18:55:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 18:55:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 18:55:59] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 18:55:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 18:55:59] 2.11.2.0 2604 17339 131652 134182 1 141 17421741 18432001 8457 130560 0 17639884 99.211 26768123 58611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 18:55:59] CVMFS is ok
[2024-06-22 18:55:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 18:55:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 18:55:59] Further information can be found at the LHC@home message board.
[2024-06-22 18:55:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 18:55:59] Checking for apptainer binary...
[2024-06-22 18:55:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 18:55:59] Running /usr/bin/apptainer --version
[2024-06-22 18:55:59] apptainer version 1.3.1-1.el7
[2024-06-22 18:55:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 18:55:59] c-212-5.aglt2.org
[2024-06-22 18:55:59] apptainer works
[2024-06-22 18:55:59] Set ATHENA_PROC_NUMBER=8
[2024-06-22 18:55:59] Set ATHENA_CORE_NUMBER=8
[2024-06-22 18:55:59] Starting ATLAS job with PandaID=6241729503
[2024-06-22 18:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:20:56]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:20:56] 2024-06-23 01:20:31,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-22 21:20:56] 2024-06-23 01:20:31,629 | INFO     | job 6241729503 has state=finished
[2024-06-22 21:20:56] 2024-06-23 01:20:31,630 | INFO     | preparing for final server update for job 6241729503 in state='finished'
[2024-06-22 21:20:56] 2024-06-23 01:20:31,630 | INFO     | this job has now completed (state=finished)
[2024-06-22 21:20:56] 2024-06-23 01:20:31,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-22 21:20:56] 2024-06-23 01:20:31,630 | INFO     | job 6241729503 has finished - writing final server update
[2024-06-22 21:20:56] 2024-06-23 01:20:31,630 | INFO     | total number of processed events: 400 (read)
[2024-06-22 21:20:56] 2024-06-23 01:20:31,635 | INFO     | executing command: lscpu
[2024-06-22 21:20:56] 2024-06-23 01:20:31,678 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-22 21:20:56] 2024-06-23 01:20:31,678 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-22 21:20:56] 2024-06-23 01:20:31,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-22 21:20:56] 2024-06-23 01:20:33,136 | INFO     | 8667s have passed since pilot start
[2024-06-22 21:20:56] 2024-06-23 01:20:40,144 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 21:20:56] 2024-06-23 01:20:40,147 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6241729503/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,150 | INFO     | extracted standard info from prmon json
[2024-06-22 21:20:56] 2024-06-23 01:20:40,150 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:20:56] 2024-06-23 01:20:40,150 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:20:56] 2024-06-23 01:20:40,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:20:56] 2024-06-23 01:20:40,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:20:56] 2024-06-23 01:20:40,154 | INFO     | fitting pss+swap vs Time
[2024-06-22 21:20:56] 2024-06-23 01:20:40,154 | INFO     | model: linear, x: [1719096990.0, 1719097051.0, 1719097112.0, 1719097173.0, 1719097234.0, 1719097295.0, 1719097356.0, 1719097417.0, 1719097478.0, 1719097539.0, 1719
[2024-06-22 21:20:56] 2024-06-23 01:20:40,154 | INFO     | sum of square deviations: 887813855.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,154 | INFO     | sum of deviations: 201008355431.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | mean x: 1719101290.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | mean y: 2114716.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | -- intersect: -389216549852.5104
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | intersect: -389216549852.5104
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | chi2: 9.596232925132401
[2024-06-22 21:20:56] 2024-06-23 01:20:40,155 | INFO     | model: linear, x: [1719096990.0, 1719097051.0, 1719097112.0, 1719097173.0, 1719097234.0, 1719097295.0, 1719097356.0, 1719097417.0, 1719097478.0, 1719097539.0, 1719
[2024-06-22 21:20:56] 2024-06-23 01:20:40,156 | INFO     | sum of square deviations: 797291228.0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,156 | INFO     | sum of deviations: 191304054745.00003
[2024-06-22 21:20:56] 2024-06-23 01:20:40,156 | INFO     | mean x: 1719101138.0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,156 | INFO     | mean y: 2098361.2189781023
[2024-06-22 21:20:56] 2024-06-23 01:20:40,156 | INFO     | -- intersect: -412483335651.53784
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | intersect: -412483335651.53784
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | chi2: 9.19240249768308
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | current chi2=9.19240249768308 (change=4.208218272731741 %)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | right removable region: 136
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | model: linear, x: [1719097295.0, 1719097356.0, 1719097417.0, 1719097478.0, 1719097539.0, 1719097600.0, 1719097661.0, 1719097722.0, 1719097783.0, 1719097844.0, 1719
[2024-06-22 21:20:56] 2024-06-23 01:20:40,157 | INFO     | sum of square deviations: 797291228.0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | sum of deviations: 166157119139.00003
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | mean x: 1719101443.0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | mean y: 2173213.2481751824
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | -- intersect: -358262076091.3709
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | intersect: -358262076091.3709
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | chi2: 7.511592048239039
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | current chi2=7.511592048239039 (change=21.723533527762932 %)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | left removable region: 10
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | model: linear, x: [1719097600.0, 1719097661.0, 1719097722.0, 1719097783.0, 1719097844.0, 1719097905.0, 1719097966.0, 1719098027.0, 1719098088.0, 1719098149.0, 1719
[2024-06-22 21:20:56] 2024-06-23 01:20:40,158 | INFO     | sum of square deviations: 620244187.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | sum of deviations: 131510298055.50002
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | mean x: 1719101412.5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | mean y: 2204772.896825397
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | -- intersect: -364498654246.4488
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | intersect: -364498654246.4488
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | chi2: 6.634513249443576
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | -- intersect: -364498654246.4488
[2024-06-22 21:20:56] 2024-06-23 01:20:40,159 | INFO     | current memory leak: 212.03 B/s (using 126 data points, chi2=6.63)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | ..............................
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . Timing measurements:
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . get job = 0 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . initial setup = 1 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . payload setup = 3 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . stage-in = 0 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . payload execution = 8637 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,160 | INFO     | . stage-out = 0 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,161 | INFO     | . log creation = 0 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,161 | INFO     | ..............................
[2024-06-22 21:20:56] 2024-06-23 01:20:40,229 | INFO     | 
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | job summary report
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | --------------------------------------------------
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | PanDA job id: 6241729503
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | task id: 40024023
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | errors: (none)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | pilot state: finished 
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | transexitcode: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | exeerrorcode: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | exeerrordiag: 
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | exitcode: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | exitmsg: OK
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | cpuconsumptiontime: 45941 s
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | nevents: 400
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | neventsw: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | pid: 30728
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | pgrp: 30728
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | corecount: 8
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | event service: False
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | sizes: {0: 2386017, 1: 2386952, 3: 2387158, 11: 2387186, 8644: 2415268, 8645: 2424228, 8648: 2424412, 8657: 2424582}
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | --------------------------------------------------
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | 
[2024-06-22 21:20:56] 2024-06-23 01:20:40,230 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-22 21:20:56] 2024-06-23 01:20:40,246 | WARNING  | process 30728 is no longer using CPU - aborting
[2024-06-22 21:20:56] 2024-06-23 01:20:40,249 | INFO     | aborting job monitoring since job object (job id=6241729503) has expired
[2024-06-22 21:20:56] 2024-06-23 01:20:40,264 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | job 6241729503 has completed (purged errors)
[2024-06-22 21:20:56] 2024-06-23 01:20:40,265 | INFO     | overall cleanup function is called
[2024-06-22 21:20:56] 2024-06-23 01:20:41,268 | INFO     | --- collectZombieJob: --- 10, [30728]
[2024-06-22 21:20:56] 2024-06-23 01:20:41,268 | INFO     | zombie collector waiting for pid 30728
[2024-06-22 21:20:56] 2024-06-23 01:20:41,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:20:56] 2024-06-23 01:20:42,273 | INFO     | collected zombie processes
[2024-06-22 21:20:56] 2024-06-23 01:20:42,273 | INFO     | will now attempt to kill all subprocesses of pid=30728
[2024-06-22 21:20:56] 2024-06-23 01:20:42,383 | INFO     | process IDs to be killed: [30728] (in reverse order)
[2024-06-22 21:20:56] 2024-06-23 01:20:42,532 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:20:56] 2024-06-23 01:20:42,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:20:56] 2024-06-23 01:20:42,540 | INFO     | did not find any defunct processes belonging to 30728
[2024-06-22 21:20:56] 2024-06-23 01:20:42,547 | INFO     | did not find any defunct processes belonging to 30728
[2024-06-22 21:20:56] 2024-06-23 01:20:42,548 | INFO     | ready for new job
[2024-06-22 21:20:56] 2024-06-23 01:20:42,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:20:56] 2024-06-23 01:20:42,549 | INFO     | *************************************
[2024-06-22 21:20:56] 2024-06-23 01:20:42,549 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:20:56] 2024-06-23 01:20:42,549 | INFO     | *************************************
[2024-06-22 21:20:56] 2024-06-23 01:20:42,549 | INFO     | 
[2024-06-22 21:20:56] 2024-06-23 01:20:42,553 | INFO     | architecture information:
[2024-06-22 21:20:56] 2024-06-23 01:20:42,554 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:20:56] 2024-06-23 01:20:42,634 | INFO     | cat /etc/os-release:
[2024-06-22 21:20:56] NAME="CentOS Linux"
[2024-06-22 21:20:56] VERSION="7 (Core)"
[2024-06-22 21:20:56] ID="centos"
[2024-06-22 21:20:56] ID_LIKE="rhel fedora"
[2024-06-22 21:20:56] VERSION_ID="7"
[2024-06-22 21:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:20:56] ANSI_COLOR="0;31"
[2024-06-22 21:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:20:56] HOME_URL="https://www.centos.org/"
[2024-06-22 21:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:20:56] 
[2024-06-22 21:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:20:56] 
[2024-06-22 21:20:56] 2024-06-23 01:20:42,634 | INFO     | *************************************
[2024-06-22 21:20:56] 2024-06-23 01:20:43,136 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-22 21:20:56] 2024-06-23 01:20:43,162 | INFO     | sufficient remaining disk space (101321801728 B)
[2024-06-22 21:20:56] 2024-06-23 01:20:43,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:20:56] 2024-06-23 01:20:43,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:20:56] 2024-06-23 01:20:43,700 | INFO     | all data control threads have been joined
[2024-06-22 21:20:56] 2024-06-23 01:20:43,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:20:56] 2024-06-23 01:20:43,758 | INFO     | aborting loop
[2024-06-22 21:20:56] 2024-06-23 01:20:44,167 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:44,168 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:20:56] 2024-06-23 01:20:44,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:20:56] 2024-06-23 01:20:44,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:20:56] 2024-06-23 01:20:44,531 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:44,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:20:56] 2024-06-23 01:20:44,635 | INFO     | all payload control threads have been joined
[2024-06-22 21:20:56] 2024-06-23 01:20:44,705 | INFO     | [data] control thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:44,742 | INFO     | all job control threads have been joined
[2024-06-22 21:20:56] 2024-06-23 01:20:44,764 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,040 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,097 | INFO     | [job] validate thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:20:56] 2024-06-23 01:20:45,345 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,465 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,497 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,561 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,607 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,641 | INFO     | [payload] control thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:45,748 | INFO     | [job] control thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:46,245 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:46,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:20:56] 2024-06-23 01:20:46,582 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:50,404 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:20:56] 2024-06-23 01:20:50,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544223905600)>', '<ExcThread(monitor, started 140543795386112)>']
[2024-06-22 21:20:56] 2024-06-23 01:20:51,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:20:56] 2024-06-23 01:20:51,207 | INFO     | [monitor] control thread has ended
[2024-06-22 21:20:56] 2024-06-23 01:20:55,855 | INFO     | all workflow threads have been joined
[2024-06-22 21:20:56] 2024-06-23 01:20:55,855 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:20:56] 2024-06-23 01:20:55,855 | INFO     | traces error code: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:55,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:20:56] 2024-06-23 01:20:55,965 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:20:56] 2024-06-23 01:20:55,966 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:20:56] 2024-06-23 01:20:55,968 [wrapper] pilotpid: 19928
[2024-06-22 21:20:56] 2024-06-23 01:20:55,970 [wrapper] Pilot exit status: 0
[2024-06-22 21:20:56] 2024-06-23 01:20:56,015 [wrapper] pandaids: 6241729503
[2024-06-22 21:20:56] 2024-06-23 01:20:56,147 [wrapper] cleanup supervisor_pilot 28055 19929
[2024-06-22 21:20:56] 2024-06-23 01:20:56,192 [wrapper] Test setup, not cleaning
[2024-06-22 21:20:56] 2024-06-23 01:20:56,242 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:20:56] 2024-06-23 01:20:56,291 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:20:56] 2024-06-23 01:20:56,379 [wrapper] apfmon messages muted
[2024-06-22 21:20:56]  *** Error codes and diagnostics ***
[2024-06-22 21:20:56]     "exeErrorCode": 0,
[2024-06-22 21:20:56]     "exeErrorDiag": "",
[2024-06-22 21:20:56]     "pilotErrorCode": 0,
[2024-06-22 21:20:56]     "pilotErrorDiag": "",
[2024-06-22 21:20:56]  *** Listing of results directory ***
[2024-06-22 21:20:56] total 843088
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 18:41 pilot3.tar.gz
[2024-06-22 21:20:56] -rwx------ 1 boincer umatlas     32308 Jun 22 18:54 runpilot2-wrapper.sh
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 18:54 queuedata.json
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas       100 Jun 22 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:20:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 18:55 run_atlas
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas       105 Jun 22 18:55 job.xml
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas 598052455 Jun 22 18:55 EVNT.40024021._000008.pool.root.1
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 18:55 start_atlas.sh
[2024-06-22 21:20:56] drwxrwx--x 2 boincer umatlas      4096 Jun 22 18:55 shared
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas    482488 Jun 22 18:55 input.tar.gz
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas         0 Jun 22 18:55 boinc_lockfile
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas      2514 Jun 22 18:55 pandaJob.out
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas       467 Jun 22 18:55 setup.sh.local
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas   1025753 Jun 22 18:56 agis_schedconf.cvmfs.json
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas         0 Jun 22 18:56 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas   1321363 Jun 22 18:56 cric_ddmendpoints.json
[2024-06-22 21:20:56] drwx------ 4 boincer umatlas      4096 Jun 22 18:56 pilot3
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas 259450205 Jun 22 21:19 HITS.40024023._001780.pool.root.1
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas       530 Jun 22 21:19 boinc_task_state.xml
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas      1087 Jun 22 21:20 memory_monitor_summary.json
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas    336066 Jun 22 21:20 log.40024023._001780.job.log.tgz.1
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas        95 Jun 22 21:20 pilot_heartbeat.json
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas      7746 Jun 22 21:20 heartbeat.json
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas      6387 Jun 22 21:20 init_data.xml
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas      4212 Jun 22 21:20 pilotlog.txt
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas        27 Jun 22 21:20 wrapper_checkpoint.txt
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas    805372 Jun 22 21:20 log.40024023._001780.job.log.1
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas       357 Jun 22 21:20 output.list
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas       620 Jun 22 21:20 runtime_log
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas   1157120 Jun 22 21:20 result.tar.gz
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 21:20 boinc_mmap_file
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas       646 Jun 22 21:20 y3kKDmCoOf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm00nKDmVAfdHn.diag
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas     11399 Jun 22 21:20 runtime_log.err
[2024-06-22 21:20:56] -rw-r--r-- 1 boincer umatlas     21679 Jun 22 21:20 stderr.txt
[2024-06-22 21:20:56] HITS file was successfully produced:
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas 259450205 Jun 22 21:19 shared/HITS.pool.root.1
[2024-06-22 21:20:56]  *** Contents of shared directory: ***
[2024-06-22 21:20:56] total 839040
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas 598052455 Jun 22 18:55 ATLAS.root_0
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 18:55 start_atlas.sh
[2024-06-22 21:20:56] -rw-r--r-- 2 boincer umatlas    482488 Jun 22 18:55 input.tar.gz
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas 259450205 Jun 22 21:19 HITS.pool.root.1
[2024-06-22 21:20:56] -rw------- 1 boincer umatlas   1157120 Jun 22 21:20 result.tar.gz
21:20:58 (9657): run_atlas exited; CPU time 45493.422263
21:20:58 (9657): called boinc_finish(0)

</stderr_txt>
]]>

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