Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:38:02 (53813): wrapper (7.7.26015): starting
17:38:02 (53813): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 17:38:02] Arguments: --nthreads 8
[2024-06-22 17:38:02] Threads: 8
[2024-06-22 17:38:02] Checking for CVMFS
[2024-06-22 17:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 17:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 17:38:02] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 17:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 17:38:02] 2.11.2.0 56809 17242 121040 134180 0 193 14718573 18432000 8057 130560 0 15174519 99.779 5511875 52738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 17:38:02] CVMFS is ok
[2024-06-22 17:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 17:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 17:38:02] Further information can be found at the LHC@home message board.
[2024-06-22 17:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 17:38:02] Checking for apptainer binary...
[2024-06-22 17:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 17:38:02] Running /usr/bin/apptainer --version
[2024-06-22 17:38:02] apptainer version 1.3.1-1.el7
[2024-06-22 17:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 17:38:03] c-212-19.aglt2.org
[2024-06-22 17:38:03] apptainer works
[2024-06-22 17:38:03] Set ATHENA_PROC_NUMBER=8
[2024-06-22 17:38:03] Set ATHENA_CORE_NUMBER=8
[2024-06-22 17:38:03] Starting ATLAS job with PandaID=6241698235
[2024-06-22 17:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:02:54]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | intersect: -86004006499.78667
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | chi2: 4.954544873271132
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | current chi2=4.954544873271132 (change=0.04356375494791383 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | right removable region: 195
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | model: linear, x: [1719092618.0, 1719092679.0, 1719092740.0, 1719092801.0, 1719092862.0, 1719092923.0, 1719092984.0, 1719093045.0, 1719093106.0, 1719093167.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,844 | INFO     | sum of square deviations: 2334722845.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,845 | INFO     | sum of deviations: 67026806191.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,845 | INFO     | mean x: 1719098565.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,845 | INFO     | mean y: 2506176.6581632653
[2024-06-22 21:02:54] 2024-06-23 01:02:38,845 | INFO     | -- intersect: -49350540854.43565
[2024-06-22 21:02:54] 2024-06-23 01:02:38,845 | INFO     | intersect: -49350540854.43565
[2024-06-22 21:02:54] 2024-06-23 01:02:38,846 | INFO     | chi2: 2.1806793606621957
[2024-06-22 21:02:54] 2024-06-23 01:02:38,846 | INFO     | current chi2=2.1806793606621957 (change=56.00545699750222 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,846 | INFO     | model: linear, x: [1719092923.0, 1719092984.0, 1719093045.0, 1719093106.0, 1719093167.0, 1719093228.0, 1719093289.0, 1719093350.0, 1719093411.0, 1719093472.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,846 | INFO     | sum of square deviations: 2160561440.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | sum of deviations: 23849715645.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | mean x: 1719098718.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | mean y: 2543989.35078534
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | -- intersect: -18974012210.7747
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | intersect: -18974012210.7747
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | chi2: 0.49199732687149084
[2024-06-22 21:02:54] 2024-06-23 01:02:38,847 | INFO     | current chi2=0.49199732687149084 (change=77.43834624444335 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,848 | INFO     | model: linear, x: [1719093228.0, 1719093289.0, 1719093350.0, 1719093411.0, 1719093472.0, 1719093533.0, 1719093594.0, 1719093655.0, 1719093716.0, 1719093777.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,848 | INFO     | sum of square deviations: 1995283922.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | sum of deviations: 4834196015.000001
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | mean x: 1719098870.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | mean y: 2561386.204301075
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | -- intersect: -4162490421.9361033
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | intersect: -4162490421.9361033
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | chi2: 0.02479281467894942
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | current chi2=0.02479281467894942 (change=94.9607826455884 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | model: linear, x: [1719093533.0, 1719093594.0, 1719093655.0, 1719093716.0, 1719093777.0, 1719093838.0, 1719093899.0, 1719093960.0, 1719094021.0, 1719094082.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,849 | INFO     | sum of square deviations: 1838657730.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,850 | INFO     | sum of deviations: 2454184756.9999995
[2024-06-22 21:02:54] 2024-06-23 01:02:38,850 | INFO     | mean x: 1719099023.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,850 | INFO     | mean y: 2563659.872928177
[2024-06-22 21:02:54] 2024-06-23 01:02:38,850 | INFO     | -- intersect: -2292037749.177897
[2024-06-22 21:02:54] 2024-06-23 01:02:38,850 | INFO     | intersect: -2292037749.177897
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | chi2: 0.007196577351023988
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | current chi2=0.007196577351023988 (change=70.97313296527679 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | model: linear, x: [1719093838.0, 1719093899.0, 1719093960.0, 1719094021.0, 1719094082.0, 1719094143.0, 1719094204.0, 1719094265.0, 1719094326.0, 1719094387.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | sum of square deviations: 1690450300.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | sum of deviations: 3196414121.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | mean x: 1719099175.5
[2024-06-22 21:02:54] 2024-06-23 01:02:38,851 | INFO     | mean y: 2562892.0511363638
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | -- intersect: -3248022399.2332077
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | intersect: -3248022399.2332077
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | chi2: 0.006127625656416999
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | current chi2=0.006127625656416999 (change=14.853612244644177 %)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | left removable region: 50
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | model: linear, x: [1719095363.0, 1719095424.0, 1719095485.0, 1719095546.0, 1719095607.0, 1719095668.0, 1719095729.0, 1719095790.0, 1719095851.0, 1719095912.0, 1719
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | sum of square deviations: 945282840.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | sum of deviations: 2715260914.0000005
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | mean x: 1719099755.0
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | mean y: 2563211.075862069
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | -- intersect: -4935434364.357198
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | intersect: -4935434364.357198
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | chi2: 0.0003732087582316443
[2024-06-22 21:02:54] 2024-06-23 01:02:38,852 | INFO     | -- intersect: -4935434364.357198
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | current memory leak: 2.87 B/s (using 145 data points, chi2=0.00)
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | ..............................
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . Timing measurements:
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . get job = 0 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . initial setup = 1 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . payload setup = 4 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . stage-in = 0 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . payload execution = 12236 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . stage-out = 1 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | . log creation = 0 s
[2024-06-22 21:02:54] 2024-06-23 01:02:38,853 | INFO     | ..............................
[2024-06-22 21:02:54] 2024-06-23 01:02:39,274 | INFO     | 
[2024-06-22 21:02:54] 2024-06-23 01:02:39,274 | INFO     | job summary report
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | --------------------------------------------------
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | PanDA job id: 6241698235
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | task id: 38921007
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | errors: (none)
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | pilot state: finished 
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | transexitcode: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | exeerrorcode: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | exeerrordiag: 
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | exitcode: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | exitmsg: OK
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | cpuconsumptiontime: 88954 s
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | nevents: 400
[2024-06-22 21:02:54] 2024-06-23 01:02:39,275 | INFO     | neventsw: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | pid: 68317
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | pgrp: 68317
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | corecount: 8
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | event service: False
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | sizes: {0: 2387059, 3: 2387265, 11: 2387293, 12244: 2417021, 12245: 2425981, 12247: 2426037, 12254: 2426335}
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | --------------------------------------------------
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | 
[2024-06-22 21:02:54] 2024-06-23 01:02:39,276 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-22 21:02:54] 2024-06-23 01:02:39,299 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,299 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,299 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,299 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,300 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:02:54] 2024-06-23 01:02:39,301 | INFO     | job 6241698235 has completed (purged errors)
[2024-06-22 21:02:54] 2024-06-23 01:02:39,301 | INFO     | overall cleanup function is called
[2024-06-22 21:02:54] 2024-06-23 01:02:40,307 | INFO     | --- collectZombieJob: --- 10, [68317]
[2024-06-22 21:02:54] 2024-06-23 01:02:40,307 | INFO     | zombie collector waiting for pid 68317
[2024-06-22 21:02:54] 2024-06-23 01:02:40,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:02:54] 2024-06-23 01:02:41,313 | INFO     | collected zombie processes
[2024-06-22 21:02:54] 2024-06-23 01:02:41,313 | INFO     | will now attempt to kill all subprocesses of pid=68317
[2024-06-22 21:02:54] 2024-06-23 01:02:41,528 | INFO     | process IDs to be killed: [68317] (in reverse order)
[2024-06-22 21:02:54] 2024-06-23 01:02:41,606 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:02:54] 2024-06-23 01:02:41,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:02:54] 2024-06-23 01:02:41,614 | INFO     | did not find any defunct processes belonging to 68317
[2024-06-22 21:02:54] 2024-06-23 01:02:41,621 | INFO     | did not find any defunct processes belonging to 68317
[2024-06-22 21:02:54] 2024-06-23 01:02:41,621 | INFO     | ready for new job
[2024-06-22 21:02:54] 2024-06-23 01:02:41,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:02:54] 2024-06-23 01:02:41,622 | INFO     | *************************************
[2024-06-22 21:02:54] 2024-06-23 01:02:41,623 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:02:54] 2024-06-23 01:02:41,623 | INFO     | *************************************
[2024-06-22 21:02:54] 2024-06-23 01:02:41,623 | INFO     | 
[2024-06-22 21:02:54] 2024-06-23 01:02:41,626 | INFO     | architecture information:
[2024-06-22 21:02:54] 2024-06-23 01:02:41,627 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:02:54] 2024-06-23 01:02:41,745 | INFO     | cat /etc/os-release:
[2024-06-22 21:02:54] NAME="CentOS Linux"
[2024-06-22 21:02:54] VERSION="7 (Core)"
[2024-06-22 21:02:54] ID="centos"
[2024-06-22 21:02:54] ID_LIKE="rhel fedora"
[2024-06-22 21:02:54] VERSION_ID="7"
[2024-06-22 21:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:02:54] ANSI_COLOR="0;31"
[2024-06-22 21:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:02:54] HOME_URL="https://www.centos.org/"
[2024-06-22 21:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:02:54] 
[2024-06-22 21:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:02:54] 
[2024-06-22 21:02:54] 2024-06-23 01:02:41,745 | INFO     | *************************************
[2024-06-22 21:02:54] 2024-06-23 01:02:42,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-22 21:02:54] 2024-06-23 01:02:42,286 | INFO     | sufficient remaining disk space (101712920576 B)
[2024-06-22 21:02:54] 2024-06-23 01:02:42,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:02:54] 2024-06-23 01:02:42,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:02:54] 2024-06-23 01:02:42,608 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:02:54] 2024-06-23 01:02:42,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:02:54] 2024-06-23 01:02:42,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:02:54] 2024-06-23 01:02:42,680 | INFO     | all payload control threads have been joined
[2024-06-22 21:02:54] 2024-06-23 01:02:42,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:02:54] 2024-06-23 01:02:42,902 | INFO     | aborting loop
[2024-06-22 21:02:54] 2024-06-23 01:02:43,139 | INFO     | all data control threads have been joined
[2024-06-22 21:02:54] 2024-06-23 01:02:43,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:02:54] 2024-06-23 01:02:43,292 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:43,534 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:43,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:02:54] 2024-06-23 01:02:43,667 | INFO     | all job control threads have been joined
[2024-06-22 21:02:54] 2024-06-23 01:02:43,688 | INFO     | [payload] control thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:43,833 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:43,907 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:43,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:02:54] 2024-06-23 01:02:44,089 | INFO     | [job] validate thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,144 | INFO     | [data] control thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,280 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,318 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,499 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,508 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,547 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,672 | INFO     | [job] control thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:44,914 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:45,657 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:47,212 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:02:54] 2024-06-23 01:02:49,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041824782144)>', '<ExcThread(monitor, started 140041519077120)>']
[2024-06-22 21:02:54] 2024-06-23 01:02:49,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:02:54] 2024-06-23 01:02:49,649 | INFO     | [monitor] control thread has ended
[2024-06-22 21:02:54] 2024-06-23 01:02:54,182 | INFO     | all workflow threads have been joined
[2024-06-22 21:02:54] 2024-06-23 01:02:54,182 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:02:54] 2024-06-23 01:02:54,183 | INFO     | traces error code: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:54,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:02:54] 2024-06-23 01:02:54,260 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:02:54] 2024-06-23 01:02:54,262 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:02:54] 2024-06-23 01:02:54,264 [wrapper] pilotpid: 58529
[2024-06-22 21:02:54] 2024-06-23 01:02:54,265 [wrapper] Pilot exit status: 0
[2024-06-22 21:02:54] 2024-06-23 01:02:54,273 [wrapper] pandaids: 6241698235
[2024-06-22 21:02:54] 2024-06-23 01:02:54,328 [wrapper] cleanup supervisor_pilot 43875 58530
[2024-06-22 21:02:54] 2024-06-23 01:02:54,330 [wrapper] Test setup, not cleaning
[2024-06-22 21:02:54] 2024-06-23 01:02:54,332 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:02:54] 2024-06-23 01:02:54,334 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:02:54] 2024-06-23 01:02:54,338 [wrapper] apfmon messages muted
[2024-06-22 21:02:54]  *** Error codes and diagnostics ***
[2024-06-22 21:02:54]     "exeErrorCode": 0,
[2024-06-22 21:02:54]     "exeErrorDiag": "",
[2024-06-22 21:02:54]     "pilotErrorCode": 0,
[2024-06-22 21:02:54]     "pilotErrorDiag": "",
[2024-06-22 21:02:54]  *** Listing of results directory ***
[2024-06-22 21:02:54] total 916892
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 17:22 pilot3.tar.gz
[2024-06-22 21:02:54] -rwx------ 1 boincer umatlas     32308 Jun 22 17:36 runpilot2-wrapper.sh
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 17:36 queuedata.json
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas       100 Jun 22 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:02:54] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 17:38 run_atlas
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas       105 Jun 22 17:38 job.xml
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas 582515330 Jun 22 17:38 EVNT.38776201._000913.pool.root.1
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 17:38 start_atlas.sh
[2024-06-22 21:02:54] drwxrwx--x 2 boincer umatlas      4096 Jun 22 17:38 shared
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas    482518 Jun 22 17:38 input.tar.gz
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas         0 Jun 22 17:38 boinc_lockfile
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas      2631 Jun 22 17:38 pandaJob.out
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas       424 Jun 22 17:38 setup.sh.local
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas   1025761 Jun 22 17:38 agis_schedconf.cvmfs.json
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas   1321363 Jun 22 17:38 cric_ddmendpoints.json
[2024-06-22 21:02:54] drwx------ 4 boincer umatlas      4096 Jun 22 17:38 pilot3
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas      6303 Jun 22 20:58 init_data.xml
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas        95 Jun 22 21:01 pilot_heartbeat.json
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas 349665145 Jun 22 21:01 HITS.38921007._054425.pool.root.1
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas       532 Jun 22 21:01 boinc_task_state.xml
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas      1078 Jun 22 21:02 memory_monitor_summary.json
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas         0 Jun 22 21:02 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas    379242 Jun 22 21:02 log.38921007._054425.job.log.tgz.1
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas      7744 Jun 22 21:02 heartbeat.json
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 21:02 boinc_mmap_file
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas        28 Jun 22 21:02 wrapper_checkpoint.txt
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas      4212 Jun 22 21:02 pilotlog.txt
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas   1212396 Jun 22 21:02 log.38921007._054425.job.log.1
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas       357 Jun 22 21:02 output.list
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas       620 Jun 22 21:02 runtime_log
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas   1607680 Jun 22 21:02 result.tar.gz
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas       650 Jun 22 21:02 xfqNDmqaNf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmAkrKDmRSjQym.diag
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas     11000 Jun 22 21:02 runtime_log.err
[2024-06-22 21:02:54] -rw-r--r-- 1 boincer umatlas     21509 Jun 22 21:02 stderr.txt
[2024-06-22 21:02:54] HITS file was successfully produced:
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas 349665145 Jun 22 21:01 shared/HITS.pool.root.1
[2024-06-22 21:02:54]  *** Contents of shared directory: ***
[2024-06-22 21:02:54] total 912408
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas 582515330 Jun 22 17:38 ATLAS.root_0
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 17:38 start_atlas.sh
[2024-06-22 21:02:54] -rw-r--r-- 2 boincer umatlas    482518 Jun 22 17:38 input.tar.gz
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas 349665145 Jun 22 21:01 HITS.pool.root.1
[2024-06-22 21:02:54] -rw------- 1 boincer umatlas   1607680 Jun 22 21:02 result.tar.gz
21:02:56 (53813): run_atlas exited; CPU time 88684.624859
21:02:56 (53813): called boinc_finish(0)

</stderr_txt>
]]>

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