Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:23:53 (52263): wrapper (7.7.26015): starting
16:23:53 (52263): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 16:23:53] Arguments: --nthreads 8
[2024-06-22 16:23:53] Threads: 8
[2024-06-22 16:23:53] Checking for CVMFS
[2024-06-22 16:23:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 16:23:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 16:23:53] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 16:23:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 16:23:53] 2.11.2.0 78210 4010 115748 134178 2 193 15549348 18432000 9118 130560 0 4830153 99.378 6224907 69604 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 16:23:53] CVMFS is ok
[2024-06-22 16:23:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 16:23:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 16:23:53] Further information can be found at the LHC@home message board.
[2024-06-22 16:23:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 16:23:53] Checking for apptainer binary...
[2024-06-22 16:23:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 16:23:53] Running /usr/bin/apptainer --version
[2024-06-22 16:23:53] apptainer version 1.3.1-1.el7
[2024-06-22 16:23:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 16:23:53] c-212-2.aglt2.org
[2024-06-22 16:23:53] apptainer works
[2024-06-22 16:23:53] Set ATHENA_PROC_NUMBER=8
[2024-06-22 16:23:53] Set ATHENA_CORE_NUMBER=8
[2024-06-22 16:23:54] Starting ATLAS job with PandaID=6241657656
[2024-06-22 16:23:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 20:15:34]  *** The last 200 lines of the pilot log: ***
[2024-06-22 20:15:34] 2024-06-23 00:15:12,907 | INFO     | job 6241657656 has state=finished
[2024-06-22 20:15:34] 2024-06-23 00:15:12,907 | INFO     | preparing for final server update for job 6241657656 in state='finished'
[2024-06-22 20:15:34] 2024-06-23 00:15:12,907 | INFO     | this job has now completed (state=finished)
[2024-06-22 20:15:34] 2024-06-23 00:15:12,907 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-22 20:15:34] 2024-06-23 00:15:12,908 | INFO     | job 6241657656 has finished - writing final server update
[2024-06-22 20:15:34] 2024-06-23 00:15:12,908 | INFO     | total number of processed events: 400 (read)
[2024-06-22 20:15:34] 2024-06-23 00:15:12,912 | INFO     | executing command: lscpu
[2024-06-22 20:15:34] 2024-06-23 00:15:12,955 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-22 20:15:34] 2024-06-23 00:15:12,955 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-22 20:15:34] 2024-06-23 00:15:13,011 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-22 20:15:34] 2024-06-23 00:15:14,704 | INFO     | monitor loop #1089: job 0:6241657656 is in state 'finished'
[2024-06-22 20:15:34] 2024-06-23 00:15:14,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,207 | INFO     | monitor loop #1090: job 0:6241657656 is in state 'finished'
[2024-06-22 20:15:34] 2024-06-23 00:15:17,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,444 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 20:15:34] 2024-06-23 00:15:17,444 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6241657656/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,445 | INFO     | extracted standard info from prmon json
[2024-06-22 20:15:34] 2024-06-23 00:15:17,445 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:15:34] 2024-06-23 00:15:17,445 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:15:34] 2024-06-23 00:15:17,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:15:34] 2024-06-23 00:15:17,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:15:34] 2024-06-23 00:15:17,448 | INFO     | fitting pss+swap vs Time
[2024-06-22 20:15:34] 2024-06-23 00:15:17,448 | INFO     | model: linear, x: [1719087862.0, 1719087923.0, 1719087984.0, 1719088045.0, 1719088106.0, 1719088167.0, 1719088228.0, 1719088289.0, 1719088350.0, 1719088411.0, 1719
[2024-06-22 20:15:34] 2024-06-23 00:15:17,449 | INFO     | sum of square deviations: 3627000098.0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,449 | INFO     | sum of deviations: 358358779612.00006
[2024-06-22 20:15:34] 2024-06-23 00:15:17,449 | INFO     | mean x: 1719094755.0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | mean y: 2286249.0660792952
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | -- intersect: -169849569773.46173
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | intersect: -169849569773.46173
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | chi2: 12.77136295638556
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | model: linear, x: [1719087862.0, 1719087923.0, 1719087984.0, 1719088045.0, 1719088106.0, 1719088167.0, 1719088228.0, 1719088289.0, 1719088350.0, 1719088411.0, 1719
[2024-06-22 20:15:34] 2024-06-23 00:15:17,450 | INFO     | sum of square deviations: 3392567795.5
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | sum of deviations: 348768943046.50006
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | mean x: 1719094602.5
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | mean y: 2280009.8243243243
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | -- intersect: -176727219193.15433
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | intersect: -176727219193.15433
[2024-06-22 20:15:34] 2024-06-23 00:15:17,451 | INFO     | chi2: 12.645449776332551
[2024-06-22 20:15:34] 2024-06-23 00:15:17,452 | INFO     | current chi2=12.645449776332551 (change=0.985902448180397 %)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,452 | INFO     | right removable region: 221
[2024-06-22 20:15:34] 2024-06-23 00:15:17,452 | INFO     | model: linear, x: [1719088167.0, 1719088228.0, 1719088289.0, 1719088350.0, 1719088411.0, 1719088472.0, 1719088533.0, 1719088594.0, 1719088655.0, 1719088716.0, 1719
[2024-06-22 20:15:34] 2024-06-23 00:15:17,452 | INFO     | sum of square deviations: 3392567795.5
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | sum of deviations: 296732033038.00006
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | mean x: 1719094907.5
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | mean y: 2326251.5135135134
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | -- intersect: -150358862569.64224
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | intersect: -150358862569.64224
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | chi2: 9.708205365528976
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | current chi2=9.708205365528976 (change=23.98457863359866 %)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,453 | INFO     | left removable region: 10
[2024-06-22 20:15:34] 2024-06-23 00:15:17,454 | INFO     | model: linear, x: [1719088472.0, 1719088533.0, 1719088594.0, 1719088655.0, 1719088716.0, 1719088777.0, 1719088838.0, 1719088899.0, 1719088960.0, 1719089021.0, 1719
[2024-06-22 20:15:34] 2024-06-23 00:15:17,454 | INFO     | sum of square deviations: 2912836010.0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,454 | INFO     | sum of deviations: 240647127557.99997
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | mean x: 1719094877.0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | mean y: 2353086.962085308
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | -- intersect: -142022547295.16522
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | intersect: -142022547295.16522
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | chi2: 8.139433417527433
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | -- intersect: -142022547295.16522
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | current memory leak: 82.62 B/s (using 211 data points, chi2=8.14)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | ..............................
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | . Timing measurements:
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | . get job = 0 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,455 | INFO     | . initial setup = 1 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | . payload setup = 3 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | . stage-in = 0 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | . payload execution = 13847 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | . stage-out = 1 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | . log creation = 0 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,456 | INFO     | ..............................
[2024-06-22 20:15:34] 2024-06-23 00:15:17,512 | INFO     | 
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | job summary report
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | --------------------------------------------------
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | PanDA job id: 6241657656
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | task id: 38921007
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | errors: (none)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | pilot state: finished 
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | transexitcode: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | exeerrorcode: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | exeerrordiag: 
[2024-06-22 20:15:34] 2024-06-23 00:15:17,513 | INFO     | exitcode: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | exitmsg: OK
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | cpuconsumptiontime: 89882 s
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | nevents: 400
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | neventsw: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | pid: 63551
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | pgrp: 63551
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | corecount: 8
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | event service: False
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | sizes: {0: 2386838, 1: 2387037, 3: 2387243, 11: 2387271, 13854: 2417838, 13856: 2426798, 13857: 2426982, 13862: 2427152}
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | --------------------------------------------------
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | 
[2024-06-22 20:15:34] 2024-06-23 00:15:17,514 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-22 20:15:34] 2024-06-23 00:15:17,531 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,531 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,531 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,531 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | job 6241657656 has completed (purged errors)
[2024-06-22 20:15:34] 2024-06-23 00:15:17,533 | INFO     | overall cleanup function is called
[2024-06-22 20:15:34] 2024-06-23 00:15:18,540 | INFO     | --- collectZombieJob: --- 10, [63551]
[2024-06-22 20:15:34] 2024-06-23 00:15:18,540 | INFO     | zombie collector waiting for pid 63551
[2024-06-22 20:15:34] 2024-06-23 00:15:18,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 20:15:34] 2024-06-23 00:15:19,541 | INFO     | collected zombie processes
[2024-06-22 20:15:34] 2024-06-23 00:15:19,541 | INFO     | will now attempt to kill all subprocesses of pid=63551
[2024-06-22 20:15:34] 2024-06-23 00:15:19,616 | INFO     | process IDs to be killed: [63551] (in reverse order)
[2024-06-22 20:15:34] 2024-06-23 00:15:19,686 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 20:15:34] 2024-06-23 00:15:19,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 20:15:34] 2024-06-23 00:15:19,691 | INFO     | did not find any defunct processes belonging to 63551
[2024-06-22 20:15:34] 2024-06-23 00:15:19,694 | INFO     | did not find any defunct processes belonging to 63551
[2024-06-22 20:15:34] 2024-06-23 00:15:19,694 | INFO     | ready for new job
[2024-06-22 20:15:34] 2024-06-23 00:15:19,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 20:15:34] 2024-06-23 00:15:19,695 | INFO     | *************************************
[2024-06-22 20:15:34] 2024-06-23 00:15:19,695 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 20:15:34] 2024-06-23 00:15:19,695 | INFO     | *************************************
[2024-06-22 20:15:34] 2024-06-23 00:15:19,695 | INFO     | 
[2024-06-22 20:15:34] 2024-06-23 00:15:19,698 | INFO     | architecture information:
[2024-06-22 20:15:34] 2024-06-23 00:15:19,698 | INFO     | executing command: cat /etc/os-release
[2024-06-22 20:15:34] 2024-06-23 00:15:19,710 | INFO     | cat /etc/os-release:
[2024-06-22 20:15:34] NAME="CentOS Linux"
[2024-06-22 20:15:34] VERSION="7 (Core)"
[2024-06-22 20:15:34] ID="centos"
[2024-06-22 20:15:34] ID_LIKE="rhel fedora"
[2024-06-22 20:15:34] VERSION_ID="7"
[2024-06-22 20:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 20:15:34] ANSI_COLOR="0;31"
[2024-06-22 20:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 20:15:34] HOME_URL="https://www.centos.org/"
[2024-06-22 20:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 20:15:34] 
[2024-06-22 20:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 20:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 20:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 20:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 20:15:34] 
[2024-06-22 20:15:34] 2024-06-23 00:15:19,711 | INFO     | *************************************
[2024-06-22 20:15:34] 2024-06-23 00:15:20,213 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-22 20:15:34] 2024-06-23 00:15:20,230 | INFO     | sufficient remaining disk space (99388227584 B)
[2024-06-22 20:15:34] 2024-06-23 00:15:20,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 20:15:34] 2024-06-23 00:15:20,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 20:15:34] 2024-06-23 00:15:20,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 20:15:34] 2024-06-23 00:15:20,239 | INFO     | all job control threads have been joined
[2024-06-22 20:15:34] 2024-06-23 00:15:20,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:15:34] 2024-06-23 00:15:20,715 | INFO     | aborting loop
[2024-06-22 20:15:34] 2024-06-23 00:15:21,070 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 20:15:34] 2024-06-23 00:15:21,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 20:15:34] 2024-06-23 00:15:21,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 20:15:34] 2024-06-23 00:15:21,095 | INFO     | all data control threads have been joined
[2024-06-22 20:15:34] 2024-06-23 00:15:21,235 | INFO     | [job] retrieve thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,244 | INFO     | [job] control thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,251 | INFO     | all payload control threads have been joined
[2024-06-22 20:15:34] 2024-06-23 00:15:21,338 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,684 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,697 | INFO     | [payload] validate_post thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,703 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,709 | INFO     | [payload] failed_post thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,720 | INFO     | [job] job monitor thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:21,978 | INFO     | [job] validate thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,100 | INFO     | [data] control thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,176 | INFO     | [data] copytool_in thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,207 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,236 | INFO     | [data] copytool_out thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,253 | INFO     | [payload] control thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:22,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:15:34] 2024-06-23 00:15:23,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 20:15:34] 2024-06-23 00:15:23,528 | INFO     | [job] queue monitor thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:27,421 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 20:15:34] 2024-06-23 00:15:28,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139733344380736)>', '<ExcThread(monitor, started 139732885411584)>']
[2024-06-22 20:15:34] 2024-06-23 00:15:29,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 20:15:34] 2024-06-23 00:15:29,105 | INFO     | [monitor] control thread has ended
[2024-06-22 20:15:34] 2024-06-23 00:15:33,562 | INFO     | all workflow threads have been joined
[2024-06-22 20:15:34] 2024-06-23 00:15:33,562 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 20:15:34] 2024-06-23 00:15:33,562 | INFO     | traces error code: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:33,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 20:15:34] 2024-06-23 00:15:33,640 [wrapper] ==== pilot stdout END ====
[2024-06-22 20:15:34] 2024-06-23 00:15:33,641 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 20:15:34] 2024-06-23 00:15:33,642 [wrapper] pilotpid: 56636
[2024-06-22 20:15:34] 2024-06-23 00:15:33,644 [wrapper] Pilot exit status: 0
[2024-06-22 20:15:34] 2024-06-23 00:15:33,765 [wrapper] pandaids: 6241657656
[2024-06-22 20:15:34] 2024-06-23 00:15:33,865 [wrapper] cleanup supervisor_pilot 17529 56637
[2024-06-22 20:15:34] 2024-06-23 00:15:33,875 [wrapper] Test setup, not cleaning
[2024-06-22 20:15:34] 2024-06-23 00:15:33,895 [wrapper] ==== wrapper stdout END ====
[2024-06-22 20:15:34] 2024-06-23 00:15:33,925 [wrapper] ==== wrapper stderr END ====
[2024-06-22 20:15:34] 2024-06-23 00:15:33,965 [wrapper] apfmon messages muted
[2024-06-22 20:15:34]  *** Error codes and diagnostics ***
[2024-06-22 20:15:34]     "exeErrorCode": 0,
[2024-06-22 20:15:34]     "exeErrorDiag": "",
[2024-06-22 20:15:34]     "pilotErrorCode": 0,
[2024-06-22 20:15:34]     "pilotErrorDiag": "",
[2024-06-22 20:15:34]  *** Listing of results directory ***
[2024-06-22 20:15:34] total 925560
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 16:10 pilot3.tar.gz
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 16:19 queuedata.json
[2024-06-22 20:15:34] -rwx------ 1 boincer umatlas     32308 Jun 22 16:22 runpilot2-wrapper.sh
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas       100 Jun 22 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 20:15:34] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 16:23 run_atlas
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas       105 Jun 22 16:23 job.xml
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas 586681491 Jun 22 16:23 EVNT.38776201._000566.pool.root.1
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 16:23 start_atlas.sh
[2024-06-22 20:15:34] drwxrwx--x 2 boincer umatlas      4096 Jun 22 16:23 shared
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas    482529 Jun 22 16:23 input.tar.gz
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas         0 Jun 22 16:23 boinc_lockfile
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas      2631 Jun 22 16:23 pandaJob.out
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas       467 Jun 22 16:23 setup.sh.local
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas   1025691 Jun 22 16:23 agis_schedconf.cvmfs.json
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas   1321363 Jun 22 16:24 cric_ddmendpoints.json
[2024-06-22 20:15:34] drwx------ 4 boincer umatlas      4096 Jun 22 16:24 pilot3
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas      6387 Jun 22 20:11 init_data.xml
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas        95 Jun 22 20:14 pilot_heartbeat.json
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas 354113434 Jun 22 20:14 HITS.38921007._054371.pool.root.1
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas       531 Jun 22 20:14 boinc_task_state.xml
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas      1079 Jun 22 20:15 memory_monitor_summary.json
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas         0 Jun 22 20:15 agis_ddmendpoints.agis.ALL.json
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas    408236 Jun 22 20:15 log.38921007._054371.job.log.tgz.1
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas      7741 Jun 22 20:15 heartbeat.json
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas        28 Jun 22 20:15 wrapper_checkpoint.txt
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 20:15 boinc_mmap_file
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas      4211 Jun 22 20:15 pilotlog.txt
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas   1312989 Jun 22 20:15 log.38921007._054371.job.log.1
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas       357 Jun 22 20:15 output.list
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas       620 Jun 22 20:15 runtime_log
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas   1740800 Jun 22 20:15 result.tar.gz
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas     11400 Jun 22 20:15 runtime_log.err
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas       648 Jun 22 20:15 Oj8MDmjQMf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmGjrKDmaD1f1m.diag
[2024-06-22 20:15:34] -rw-r--r-- 1 boincer umatlas     21757 Jun 22 20:15 stderr.txt
[2024-06-22 20:15:34] HITS file was successfully produced:
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas 354113434 Jun 22 20:14 shared/HITS.pool.root.1
[2024-06-22 20:15:34]  *** Contents of shared directory: ***
[2024-06-22 20:15:34] total 920948
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas 586681491 Jun 22 16:23 ATLAS.root_0
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 16:23 start_atlas.sh
[2024-06-22 20:15:34] -rw-r--r-- 2 boincer umatlas    482529 Jun 22 16:23 input.tar.gz
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas 354113434 Jun 22 20:14 HITS.pool.root.1
[2024-06-22 20:15:34] -rw------- 1 boincer umatlas   1740800 Jun 22 20:15 result.tar.gz
20:15:36 (52263): run_atlas exited; CPU time 89517.645016
20:15:36 (52263): called boinc_finish(0)

</stderr_txt>
]]>

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