Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:29:57 (697550): wrapper (7.7.26015): starting
06:29:57 (697550): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 06:29:57] Arguments: --nthreads 12
[2024-06-23 06:29:57] Threads: 12
[2024-06-23 06:29:57] Checking for CVMFS
[2024-06-23 06:29:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 06:29:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 06:29:57] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 06:29:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 06:29:58] 2.11.2.0 2508 2717 77128 134199 3 55 3571749 4096001 0 65024 0 2402983 99.991 399631 1999 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-23 06:29:58] CVMFS is ok
[2024-06-23 06:29:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 06:29:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 06:29:58] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-23 06:29:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-23 06:29:58] Further information can be found at the LHC@home message board.
[2024-06-23 06:29:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 06:29:58] Checking for apptainer binary...
[2024-06-23 06:29:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 06:29:58] Running /usr/bin/apptainer --version
[2024-06-23 06:29:58] /usr/bin/apptainer: symbol lookup error: /usr/bin/apptainer: undefined symbol: seccomp_notify_respond
[2024-06-23 06:29:58] apptainer seems to be installed but not working
[2024-06-23 06:29:58] Will use version from CVMFS
[2024-06-23 06:29:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 06:29:58] sarnet8.local
[2024-06-23 06:29:58] apptainer works
[2024-06-23 06:29:58] Set ATHENA_PROC_NUMBER=12
[2024-06-23 06:29:58] Set ATHENA_CORE_NUMBER=12
[2024-06-23 06:29:58] Starting ATLAS job with PandaID=6241652504
[2024-06-23 06:29:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 07:48:20]  *** The last 200 lines of the pilot log: ***
[2024-06-23 07:48:20]  direct_access_wan=False
[2024-06-23 07:48:20]  domain=
[2024-06-23 07:48:20]  filesize=365832
[2024-06-23 07:48:20]  filetype=log
[2024-06-23 07:48:20]  guid=0ab1cbec-aa34-45ca-b8f8-3042c53086c6
[2024-06-23 07:48:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-23 07:48:20]  is_tar=False
[2024-06-23 07:48:20]  lfn=log.40024014._001848.job.log.tgz.1
[2024-06-23 07:48:20]  mtime=0
[2024-06-23 07:48:20]  protocol_id=None
[2024-06-23 07:48:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-23 07:48:20]  replicas=None
[2024-06-23 07:48:20]  scope=mc23_13p6TeV
[2024-06-23 07:48:20]  status=None
[2024-06-23 07:48:20]  status_code=0
[2024-06-23 07:48:20]  storage_token=
[2024-06-23 07:48:20]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6241652504/log.40024014._001848.job.log.tgz.1
[2024-06-23 07:48:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/2d/log.40024014._001848.job.log.tgz.1
[2024-06-23 07:48:20]  workdir=None
[2024-06-23 07:48:20] ]
[2024-06-23 07:48:20] 2024-06-23 11:47:51,004 | INFO     | transferring file log.40024014._001848.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6241652504/log.40024014._001848.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-06-23 07:48:20] 2024-06-23 11:47:51,005 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6241652504/log.40024014._001848.job.log.tgz.1 /var/lib/boinc/slots/0/log.40024014._001848.job
[2024-06-23 07:48:20] 2024-06-23 11:47:51,021 | INFO     | adding to output.list: log.40024014._001848.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/2d/log.40024014._001848.job.log.tg
[2024-06-23 07:48:20] 2024-06-23 11:47:51,021 | INFO     | summary of transferred files:
[2024-06-23 07:48:20] 2024-06-23 11:47:51,021 | INFO     |  -- lfn=log.40024014._001848.job.log.tgz.1, status_code=0, status=transferred
[2024-06-23 07:48:20] 2024-06-23 11:47:51,021 | INFO     | stage-out finished correctly
[2024-06-23 07:48:20] 2024-06-23 11:47:52,876 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-23 07:48:20] 2024-06-23 11:47:54,285 | INFO     | job 6241652504 has state=finished
[2024-06-23 07:48:20] 2024-06-23 11:47:54,285 | INFO     | preparing for final server update for job 6241652504 in state='finished'
[2024-06-23 07:48:20] 2024-06-23 11:47:55,062 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-06-23 07:48:20] 2024-06-23 11:47:55,062 | INFO     | this job has now completed (state=finished)
[2024-06-23 07:48:20] 2024-06-23 11:47:55,062 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-23 07:48:20] 2024-06-23 11:47:55,062 | INFO     | job 6241652504 has finished - writing final server update
[2024-06-23 07:48:20] 2024-06-23 11:47:55,062 | INFO     | total number of processed events: 400 (read)
[2024-06-23 07:48:20] 2024-06-23 11:47:55,063 | INFO     | executing command: lscpu
[2024-06-23 07:48:20] 2024-06-23 11:47:55,080 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2024-06-23 07:48:20] 2024-06-23 11:47:55,081 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-23 07:48:20] 2024-06-23 11:47:55,110 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-23 07:48:20] 2024-06-23 11:48:00,180 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-23 07:48:20] 2024-06-23 11:48:00,180 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6241652504/memory_monitor_summary.json (trf name=prmon)
[2024-06-23 07:48:20] 2024-06-23 11:48:00,181 | INFO     | extracted standard info from prmon json
[2024-06-23 07:48:20] 2024-06-23 11:48:00,181 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 07:48:20] 2024-06-23 11:48:00,181 | WARNING  | GPU info not found in prmon json
[2024-06-23 07:48:20] 2024-06-23 11:48:00,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 07:48:20] 2024-06-23 11:48:00,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 07:48:20] 2024-06-23 11:48:00,182 | INFO     | fitting pss+swap vs Time
[2024-06-23 07:48:20] 2024-06-23 11:48:00,183 | INFO     | model: linear, x: [1719138931.0, 1719138992.0, 1719139053.0, 1719139114.0, 1719139175.0, 1719139236.0, 1719139297.0, 1719139358.0, 1719139419.0, 1719139480.0, 1719
[2024-06-23 07:48:20] 2024-06-23 11:48:00,183 | INFO     | sum of square deviations: 106336877.5
[2024-06-23 07:48:20] 2024-06-23 11:48:00,183 | INFO     | sum of deviations: 6130184386.0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,183 | INFO     | mean x: 1719141035.5
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | mean y: 2830312.4285714286
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | -- intersect: -99103441950.96352
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | intersect: -99103441950.96352
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | chi2: 1.6936350883973046
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | -- intersect: -99103441950.96352
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | current memory leak: 57.65 B/s (using 70 data points, chi2=1.69)
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | ..............................
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | . Timing measurements:
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | . get job = 0 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | . initial setup = 1 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | . payload setup = 3 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,184 | INFO     | . stage-in = 0 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,185 | INFO     | . payload execution = 4643 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,185 | INFO     | . stage-out = 0 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,185 | INFO     | . log creation = 0 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,185 | INFO     | ..............................
[2024-06-23 07:48:20] 2024-06-23 11:48:00,240 | WARNING  | process 708235 is no longer using CPU - aborting
[2024-06-23 07:48:20] 2024-06-23 11:48:00,246 | INFO     | aborting job monitoring since job object (job id=6241652504) has expired
[2024-06-23 07:48:20] 2024-06-23 11:48:00,748 | INFO     | 
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | job summary report
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | --------------------------------------------------
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | PanDA job id: 6241652504
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | task id: 40024014
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | errors: (none)
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | pilot state: finished 
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | transexitcode: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | exeerrorcode: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | exeerrordiag: 
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | exitcode: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | exitmsg: OK
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | cpuconsumptiontime: 45249 s
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | nevents: 400
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | neventsw: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,749 | INFO     | pid: 708235
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | pgrp: 708235
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | corecount: 12
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | event service: False
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | sizes: {0: 2386874, 2: 2387080, 11: 2387108, 4650: 2413144, 4652: 2422104, 4654: 2422160, 4661: 2422458}
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | --------------------------------------------------
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | 
[2024-06-23 07:48:20] 2024-06-23 11:48:00,750 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 07:48:20] 2024-06-23 11:48:00,769 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | job 6241652504 has completed (purged errors)
[2024-06-23 07:48:20] 2024-06-23 11:48:00,771 | INFO     | overall cleanup function is called
[2024-06-23 07:48:20] 2024-06-23 11:48:01,778 | INFO     | --- collectZombieJob: --- 10, [708235]
[2024-06-23 07:48:20] 2024-06-23 11:48:01,778 | INFO     | zombie collector waiting for pid 708235
[2024-06-23 07:48:20] 2024-06-23 11:48:01,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 07:48:20] 2024-06-23 11:48:02,784 | INFO     | collected zombie processes
[2024-06-23 07:48:20] 2024-06-23 11:48:02,784 | INFO     | will now attempt to kill all subprocesses of pid=708235
[2024-06-23 07:48:20] 2024-06-23 11:48:02,834 | INFO     | process IDs to be killed: [708235] (in reverse order)
[2024-06-23 07:48:20] 2024-06-23 11:48:02,866 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 07:48:20] 2024-06-23 11:48:02,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 07:48:20] 2024-06-23 11:48:02,868 | INFO     | did not find any defunct processes belonging to 708235
[2024-06-23 07:48:20] 2024-06-23 11:48:02,869 | INFO     | did not find any defunct processes belonging to 708235
[2024-06-23 07:48:20] 2024-06-23 11:48:02,869 | INFO     | ready for new job
[2024-06-23 07:48:20] 2024-06-23 11:48:02,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 07:48:20] 2024-06-23 11:48:02,870 | INFO     | *************************************
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | *************************************
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | 
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | pilot is running in a VM
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | architecture information:
[2024-06-23 07:48:20] 2024-06-23 11:48:02,871 | INFO     | executing command: cat /etc/os-release
[2024-06-23 07:48:20] 2024-06-23 11:48:02,885 | INFO     | cat /etc/os-release:
[2024-06-23 07:48:20] NAME="CentOS Linux"
[2024-06-23 07:48:20] VERSION="7 (Core)"
[2024-06-23 07:48:20] ID="centos"
[2024-06-23 07:48:20] ID_LIKE="rhel fedora"
[2024-06-23 07:48:20] VERSION_ID="7"
[2024-06-23 07:48:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 07:48:20] ANSI_COLOR="0;31"
[2024-06-23 07:48:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 07:48:20] HOME_URL="https://www.centos.org/"
[2024-06-23 07:48:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 07:48:20] 
[2024-06-23 07:48:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 07:48:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 07:48:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 07:48:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 07:48:20] 
[2024-06-23 07:48:20] 2024-06-23 11:48:02,886 | INFO     | *************************************
[2024-06-23 07:48:20] 2024-06-23 11:48:03,389 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 07:48:20] 2024-06-23 11:48:03,405 | INFO     | sufficient remaining disk space (31414288384 B)
[2024-06-23 07:48:20] 2024-06-23 11:48:03,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 07:48:20] 2024-06-23 11:48:03,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 07:48:20] 2024-06-23 11:48:03,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 07:48:20] 2024-06-23 11:48:03,527 | INFO     | all job control threads have been joined
[2024-06-23 07:48:20] 2024-06-23 11:48:03,563 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 07:48:20] 2024-06-23 11:48:03,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 07:48:20] 2024-06-23 11:48:03,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 07:48:20] 2024-06-23 11:48:03,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 07:48:20] 2024-06-23 11:48:03,757 | INFO     | aborting loop
[2024-06-23 07:48:20] 2024-06-23 11:48:03,806 | INFO     | all data control threads have been joined
[2024-06-23 07:48:20] 2024-06-23 11:48:04,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 07:48:20] 2024-06-23 11:48:04,411 | INFO     | [job] retrieve thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:04,455 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:04,465 | INFO     | all payload control threads have been joined
[2024-06-23 07:48:20] 2024-06-23 11:48:04,533 | INFO     | [job] control thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:04,762 | INFO     | [job] job monitor thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:04,812 | INFO     | [data] control thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,002 | INFO     | [payload] validate_post thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,192 | INFO     | [payload] failed_post thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 07:48:20] 2024-06-23 11:48:05,471 | INFO     | [payload] control thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,565 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,598 | INFO     | [data] copytool_in thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,760 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:05,822 | INFO     | [job] validate thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:06,091 | INFO     | [data] copytool_out thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:06,261 | INFO     | [job] queue monitor thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:07,437 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:13,549 | INFO     | job.realtimelogging is not enabled
[2024-06-23 07:48:20] 2024-06-23 11:48:14,554 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 07:48:20] 2024-06-23 11:48:14,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679738447680)>', '<ExcThread(monitor, started 140679137179392)>']
[2024-06-23 07:48:20] 2024-06-23 11:48:15,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 07:48:20] 2024-06-23 11:48:15,614 | INFO     | [monitor] control thread has ended
[2024-06-23 07:48:20] 2024-06-23 11:48:19,692 | INFO     | all workflow threads have been joined
[2024-06-23 07:48:20] 2024-06-23 11:48:19,693 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 07:48:20] 2024-06-23 11:48:19,693 | INFO     | traces error code: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:19,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 07:48:20] 2024-06-23 11:48:19,749 [wrapper] ==== pilot stdout END ====
[2024-06-23 07:48:20] 2024-06-23 11:48:19,751 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 07:48:20] 2024-06-23 11:48:19,753 [wrapper] pilotpid: 701744
[2024-06-23 07:48:20] 2024-06-23 11:48:19,755 [wrapper] Pilot exit status: 0
[2024-06-23 07:48:20] 2024-06-23 11:48:19,762 [wrapper] pandaids: 6241652504
[2024-06-23 07:48:20] 2024-06-23 11:48:19,782 [wrapper] cleanup supervisor_pilot  722447 701745
[2024-06-23 07:48:20] 2024-06-23 11:48:19,784 [wrapper] Test setup, not cleaning
[2024-06-23 07:48:20] 2024-06-23 11:48:19,785 [wrapper] ==== wrapper stdout END ====
[2024-06-23 07:48:20] 2024-06-23 11:48:19,787 [wrapper] ==== wrapper stderr END ====
[2024-06-23 07:48:20] 2024-06-23 11:48:19,791 [wrapper] apfmon messages muted
[2024-06-23 07:48:20]  *** Error codes and diagnostics ***
[2024-06-23 07:48:20]     "exeErrorCode": 0,
[2024-06-23 07:48:20]     "exeErrorDiag": "",
[2024-06-23 07:48:20]     "pilotErrorCode": 0,
[2024-06-23 07:48:20]     "pilotErrorDiag": "",
[2024-06-23 07:48:20]  *** Listing of results directory ***
[2024-06-23 07:48:20] total 846220
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc    469766 Jun 22 15:37 pilot3.tar.gz
[2024-06-23 07:48:20] -rwx------. 1 boinc boinc     32308 Jun 22 16:04 runpilot2-wrapper.sh
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc      5654 Jun 22 16:04 queuedata.json
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc       100 Jun 23 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 07:48:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun 23 06:29 run_atlas
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc       105 Jun 23 06:29 job.xml
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc      6167 Jun 23 06:29 init_data.xml
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc 599983249 Jun 23 06:29 EVNT.40024012._000032.pool.root.1
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc     17537 Jun 23 06:29 start_atlas.sh
[2024-06-23 07:48:20] drwxrwx--x. 2 boinc boinc        68 Jun 23 06:29 shared
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc    482483 Jun 23 06:29 input.tar.gz
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc         0 Jun 23 06:29 boinc_lockfile
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc      2511 Jun 23 06:29 pandaJob.out
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc       424 Jun 23 06:29 setup.sh.local
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc   1025304 Jun 23 06:30 agis_schedconf.cvmfs.json
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc         0 Jun 23 06:30 agis_ddmendpoints.agis.ALL.json
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc   1321363 Jun 23 06:30 cric_ddmendpoints.json
[2024-06-23 07:48:20] drwx------. 4 boinc boinc      4096 Jun 23 06:30 pilot3
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc 261446226 Jun 23 07:47 HITS.40024014._001848.pool.root.1
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc        95 Jun 23 07:47 pilot_heartbeat.json
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc       531 Jun 23 07:47 boinc_task_state.xml
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc      1037 Jun 23 07:47 memory_monitor_summary.json
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc    365832 Jun 23 07:47 log.40024014._001848.job.log.tgz.1
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc      8192 Jun 23 07:47 boinc_mmap_file
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc        27 Jun 23 07:47 wrapper_checkpoint.txt
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc      7729 Jun 23 07:48 heartbeat.json
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc      4345 Jun 23 07:48 pilotlog.txt
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc    421206 Jun 23 07:48 log.40024014._001848.job.log.1
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc       357 Jun 23 07:48 output.list
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc       620 Jun 23 07:48 runtime_log
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc    808960 Jun 23 07:48 result.tar.gz
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc     10988 Jun 23 07:48 runtime_log.err
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc       643 Jun 23 07:48 RsuKDmi9Lf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmjnYKDmLWv8Po.diag
[2024-06-23 07:48:20] -rw-r--r--. 1 boinc boinc     21527 Jun 23 07:48 stderr.txt
[2024-06-23 07:48:20] HITS file was successfully produced:
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc 261446226 Jun 23 07:47 shared/HITS.pool.root.1
[2024-06-23 07:48:20]  *** Contents of shared directory: ***
[2024-06-23 07:48:20] total 842528
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc 599983249 Jun 23 06:29 ATLAS.root_0
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc     17537 Jun 23 06:29 start_atlas.sh
[2024-06-23 07:48:20] -rw-r--r--. 2 boinc boinc    482483 Jun 23 06:29 input.tar.gz
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc 261446226 Jun 23 07:47 HITS.pool.root.1
[2024-06-23 07:48:20] -rw-------. 1 boinc boinc    808960 Jun 23 07:48 result.tar.gz
07:48:22 (697550): run_atlas exited; CPU time 45222.224899
07:48:22 (697550): called boinc_finish(0)

</stderr_txt>
]]>

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