Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:58:55 (10725): wrapper (7.7.26015): starting
15:58:55 (10725): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 15:58:55] Arguments: --nthreads 8
[2024-06-22 15:58:55] Threads: 8
[2024-06-22 15:58:55] Checking for CVMFS
[2024-06-22 15:58:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 15:58:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 15:58:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 15:58:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 15:58:55] 2.11.2.0 95880 24456 132616 134177 3 64 11948664 18432000 6527 130560 0 4792038 99.502 3402492 54216 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 15:58:55] CVMFS is ok
[2024-06-22 15:58:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 15:58:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 15:58:55] Further information can be found at the LHC@home message board.
[2024-06-22 15:58:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 15:58:55] Checking for apptainer binary...
[2024-06-22 15:58:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 15:58:55] Running /usr/bin/apptainer --version
[2024-06-22 15:58:55] apptainer version 1.3.1-1.el7
[2024-06-22 15:58:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 15:58:56] c-212-9.aglt2.org
[2024-06-22 15:58:56] apptainer works
[2024-06-22 15:58:56] Set ATHENA_PROC_NUMBER=8
[2024-06-22 15:58:56] Set ATHENA_CORE_NUMBER=8
[2024-06-22 15:58:56] Starting ATLAS job with PandaID=6241648864
[2024-06-22 15:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 19:29:51]  *** The last 200 lines of the pilot log: ***
[2024-06-22 19:29:51] 2024-06-22 23:29:29,850 | INFO     | current chi2=0.5724712317709293 (change=67.93778681769726 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,850 | INFO     | model: linear, x: [1719087280.0, 1719087341.0, 1719087402.0, 1719087463.0, 1719087524.0, 1719087585.0, 1719087646.0, 1719087707.0, 1719087768.0, 1719087829.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,850 | INFO     | sum of square deviations: 2194675568.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | sum of deviations: 14008656405.000002
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | mean x: 1719093105.5
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | mean y: 2543219.8333333335
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | -- intersect: -10970461170.560427
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | intersect: -10970461170.560427
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | chi2: 0.018811431536205746
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | current chi2=0.018811431536205746 (change=96.71399530802395 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,851 | INFO     | model: linear, x: [1719087585.0, 1719087646.0, 1719087707.0, 1719087768.0, 1719087829.0, 1719087890.0, 1719087951.0, 1719088012.0, 1719088073.0, 1719088134.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,852 | INFO     | sum of square deviations: 2027639878.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,852 | INFO     | sum of deviations: 11544865978.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,852 | INFO     | mean x: 1719093258.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | mean y: 2545437.1764705884
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | -- intersect: -9785534528.418571
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | intersect: -9785534528.418571
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | chi2: 0.0020692175557017515
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | current chi2=0.0020692175557017515 (change=89.00021217566992 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | model: linear, x: [1719087890.0, 1719087951.0, 1719088012.0, 1719088073.0, 1719088134.0, 1719088195.0, 1719088256.0, 1719088317.0, 1719088378.0, 1719088439.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,853 | INFO     | sum of square deviations: 1869302025.5
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | sum of deviations: 9581326943.5
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | mean x: 1719093410.5
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | mean y: 2547325.258241758
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | -- intersect: -8808867731.124233
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | intersect: -8808867731.124233
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | chi2: 0.0007878076678882044
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | current chi2=0.0007878076678882044 (change=61.92726735198085 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,854 | INFO     | model: linear, x: [1719088195.0, 1719088256.0, 1719088317.0, 1719088378.0, 1719088439.0, 1719088500.0, 1719088561.0, 1719088622.0, 1719088683.0, 1719088744.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | sum of square deviations: 1719429448.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | sum of deviations: 8235515876.999995
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | mean x: 1719093563.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | mean y: 2548692.3841807907
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | -- intersect: -8231358403.13684
[2024-06-22 19:29:51] 2024-06-22 23:29:29,855 | INFO     | intersect: -8231358403.13684
[2024-06-22 19:29:51] 2024-06-22 23:29:29,856 | INFO     | chi2: 0.0003829941284126477
[2024-06-22 19:29:51] 2024-06-22 23:29:29,856 | INFO     | current chi2=0.0003829941284126477 (change=51.384818398721485 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,856 | INFO     | model: linear, x: [1719088500.0, 1719088561.0, 1719088622.0, 1719088683.0, 1719088744.0, 1719088805.0, 1719088866.0, 1719088927.0, 1719088988.0, 1719089049.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,856 | INFO     | sum of square deviations: 1577789583.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | sum of deviations: 7364798857.500001
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | mean x: 1719093715.5
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | mean y: 2549629.447674419
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | -- intersect: -8021827998.763495
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | intersect: -8021827998.763495
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | chi2: 0.00033713992118684547
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | current chi2=0.00033713992118684547 (change=11.972561411280367 %)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | left removable region: 70
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | model: linear, x: [1719090635.0, 1719090696.0, 1719090757.0, 1719090818.0, 1719090879.0, 1719090940.0, 1719091001.0, 1719091062.0, 1719091123.0, 1719091184.0, 1719
[2024-06-22 19:29:51] 2024-06-22 23:29:29,857 | INFO     | sum of square deviations: 697054930.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | sum of deviations: 3349928033.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | mean x: 1719094600.0
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | mean y: 2553530.5496183205
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | -- intersect: -8259124199.667312
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | intersect: -8259124199.667312
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | chi2: 0.00018107030781766952
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | -- intersect: -8259124199.667312
[2024-06-22 19:29:51] 2024-06-22 23:29:29,858 | INFO     | current memory leak: 4.81 B/s (using 131 data points, chi2=0.00)
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | ..............................
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . Timing measurements:
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . get job = 0 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . initial setup = 1 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . payload setup = 3 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . stage-in = 0 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . payload execution = 12597 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . stage-out = 1 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | . log creation = 0 s
[2024-06-22 19:29:51] 2024-06-22 23:29:29,859 | INFO     | ..............................
[2024-06-22 19:29:51] 2024-06-22 23:29:29,906 | WARNING  | process 21528 is no longer using CPU - aborting
[2024-06-22 19:29:51] 2024-06-22 23:29:29,906 | INFO     | aborting job monitoring since job object (job id=6241648864) has expired
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | 
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | job summary report
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | --------------------------------------------------
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | PanDA job id: 6241648864
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | task id: 38921013
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | errors: (none)
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | pilot state: finished 
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | transexitcode: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | exeerrorcode: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | exeerrordiag: 
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | exitcode: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | exitmsg: OK
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | cpuconsumptiontime: 92063 s
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | nevents: 400
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | neventsw: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | pid: 21528
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | pgrp: 21528
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | corecount: 8
[2024-06-22 19:29:51] 2024-06-22 23:29:30,317 | INFO     | event service: False
[2024-06-22 19:29:51] 2024-06-22 23:29:30,318 | INFO     | sizes: {0: 2387029, 3: 2387235, 11: 2387263, 12605: 2417182, 12607: 2426198, 12613: 2426312}
[2024-06-22 19:29:51] 2024-06-22 23:29:30,318 | INFO     | --------------------------------------------------
[2024-06-22 19:29:51] 2024-06-22 23:29:30,318 | INFO     | 
[2024-06-22 19:29:51] 2024-06-22 23:29:30,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | job 6241648864 has completed (purged errors)
[2024-06-22 19:29:51] 2024-06-22 23:29:30,338 | INFO     | overall cleanup function is called
[2024-06-22 19:29:51] 2024-06-22 23:29:31,345 | INFO     | --- collectZombieJob: --- 10, [21528]
[2024-06-22 19:29:51] 2024-06-22 23:29:31,345 | INFO     | zombie collector waiting for pid 21528
[2024-06-22 19:29:51] 2024-06-22 23:29:31,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 19:29:51] 2024-06-22 23:29:32,350 | INFO     | collected zombie processes
[2024-06-22 19:29:51] 2024-06-22 23:29:32,350 | INFO     | will now attempt to kill all subprocesses of pid=21528
[2024-06-22 19:29:51] 2024-06-22 23:29:32,436 | INFO     | process IDs to be killed: [21528] (in reverse order)
[2024-06-22 19:29:51] 2024-06-22 23:29:32,509 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 19:29:51] 2024-06-22 23:29:32,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 19:29:51] 2024-06-22 23:29:32,516 | INFO     | did not find any defunct processes belonging to 21528
[2024-06-22 19:29:51] 2024-06-22 23:29:32,522 | INFO     | did not find any defunct processes belonging to 21528
[2024-06-22 19:29:51] 2024-06-22 23:29:32,523 | INFO     | ready for new job
[2024-06-22 19:29:51] 2024-06-22 23:29:32,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 19:29:51] 2024-06-22 23:29:32,524 | INFO     | *************************************
[2024-06-22 19:29:51] 2024-06-22 23:29:32,524 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 19:29:51] 2024-06-22 23:29:32,524 | INFO     | *************************************
[2024-06-22 19:29:51] 2024-06-22 23:29:32,524 | INFO     | 
[2024-06-22 19:29:51] 2024-06-22 23:29:32,528 | INFO     | architecture information:
[2024-06-22 19:29:51] 2024-06-22 23:29:32,528 | INFO     | executing command: cat /etc/os-release
[2024-06-22 19:29:51] 2024-06-22 23:29:32,542 | INFO     | cat /etc/os-release:
[2024-06-22 19:29:51] NAME="CentOS Linux"
[2024-06-22 19:29:51] VERSION="7 (Core)"
[2024-06-22 19:29:51] ID="centos"
[2024-06-22 19:29:51] ID_LIKE="rhel fedora"
[2024-06-22 19:29:51] VERSION_ID="7"
[2024-06-22 19:29:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 19:29:51] ANSI_COLOR="0;31"
[2024-06-22 19:29:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 19:29:51] HOME_URL="https://www.centos.org/"
[2024-06-22 19:29:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 19:29:51] 
[2024-06-22 19:29:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 19:29:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 19:29:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 19:29:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 19:29:51] 
[2024-06-22 19:29:51] 2024-06-22 23:29:32,542 | INFO     | *************************************
[2024-06-22 19:29:51] 2024-06-22 23:29:33,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-22 19:29:51] 2024-06-22 23:29:33,060 | INFO     | sufficient remaining disk space (102160662528 B)
[2024-06-22 19:29:51] 2024-06-22 23:29:33,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 19:29:51] 2024-06-22 23:29:33,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 19:29:51] 2024-06-22 23:29:33,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 19:29:51] 2024-06-22 23:29:33,198 | INFO     | all payload control threads have been joined
[2024-06-22 19:29:51] 2024-06-22 23:29:33,210 | INFO     | all data control threads have been joined
[2024-06-22 19:29:51] 2024-06-22 23:29:33,387 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 19:29:51] 2024-06-22 23:29:33,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 19:29:51] 2024-06-22 23:29:33,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 19:29:51] 2024-06-22 23:29:33,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:29:51] 2024-06-22 23:29:33,413 | INFO     | aborting loop
[2024-06-22 19:29:51] 2024-06-22 23:29:33,769 | INFO     | all job control threads have been joined
[2024-06-22 19:29:51] 2024-06-22 23:29:34,066 | INFO     | [job] retrieve thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,156 | INFO     | [payload] failed_post thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,199 | INFO     | [payload] control thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,211 | INFO     | [data] control thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,416 | INFO     | [job] job monitor thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,486 | INFO     | [job] validate thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,722 | INFO     | [payload] validate_post thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,774 | INFO     | [job] control thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:34,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:29:51] 2024-06-22 23:29:35,024 | INFO     | [data] copytool_in thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:35,030 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:35,067 | INFO     | [data] copytool_out thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:35,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 19:29:51] 2024-06-22 23:29:35,389 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:35,443 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:35,912 | INFO     | [job] queue monitor thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:39,123 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:43,613 | INFO     | job.realtimelogging is not enabled
[2024-06-22 19:29:51] 2024-06-22 23:29:44,618 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 19:29:51] 2024-06-22 23:29:46,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107898861376)>', '<ExcThread(monitor, started 140107193509632)>']
[2024-06-22 19:29:51] 2024-06-22 23:29:47,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 19:29:51] 2024-06-22 23:29:47,423 | INFO     | [monitor] control thread has ended
[2024-06-22 19:29:51] 2024-06-22 23:29:51,506 | INFO     | all workflow threads have been joined
[2024-06-22 19:29:51] 2024-06-22 23:29:51,506 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 19:29:51] 2024-06-22 23:29:51,506 | INFO     | traces error code: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:51,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 19:29:51] 2024-06-22 23:29:51,579 [wrapper] ==== pilot stdout END ====
[2024-06-22 19:29:51] 2024-06-22 23:29:51,581 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 19:29:51] 2024-06-22 23:29:51,582 [wrapper] pilotpid: 14964
[2024-06-22 19:29:51] 2024-06-22 23:29:51,584 [wrapper] Pilot exit status: 0
[2024-06-22 19:29:51] 2024-06-22 23:29:51,600 [wrapper] pandaids: 6241648864
[2024-06-22 19:29:51] 2024-06-22 23:29:51,652 [wrapper] cleanup supervisor_pilot 81513 14965
[2024-06-22 19:29:51] 2024-06-22 23:29:51,654 [wrapper] Test setup, not cleaning
[2024-06-22 19:29:51] 2024-06-22 23:29:51,655 [wrapper] ==== wrapper stdout END ====
[2024-06-22 19:29:51] 2024-06-22 23:29:51,657 [wrapper] ==== wrapper stderr END ====
[2024-06-22 19:29:51] 2024-06-22 23:29:51,660 [wrapper] apfmon messages muted
[2024-06-22 19:29:51]  *** Error codes and diagnostics ***
[2024-06-22 19:29:51]     "exeErrorCode": 0,
[2024-06-22 19:29:51]     "exeErrorDiag": "",
[2024-06-22 19:29:51]     "pilotErrorCode": 0,
[2024-06-22 19:29:51]     "pilotErrorDiag": "",
[2024-06-22 19:29:51]  *** Listing of results directory ***
[2024-06-22 19:29:51] total 868036
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 15:37 pilot3.tar.gz
[2024-06-22 19:29:51] -rwx------ 1 boincer umatlas     32308 Jun 22 15:57 runpilot2-wrapper.sh
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 15:57 queuedata.json
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas       100 Jun 22 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 19:29:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 15:58 run_atlas
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas       105 Jun 22 15:58 job.xml
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas 539243901 Jun 22 15:58 EVNT.38776210._000421.pool.root.1
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 15:58 start_atlas.sh
[2024-06-22 19:29:51] drwxrwx--x 2 boincer umatlas      4096 Jun 22 15:58 shared
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas    482529 Jun 22 15:58 input.tar.gz
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas         0 Jun 22 15:58 boinc_lockfile
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas      2645 Jun 22 15:58 pandaJob.out
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas       424 Jun 22 15:58 setup.sh.local
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas   1025683 Jun 22 15:59 agis_schedconf.cvmfs.json
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas   1321363 Jun 22 15:59 cric_ddmendpoints.json
[2024-06-22 19:29:51] drwx------ 4 boincer umatlas      4096 Jun 22 15:59 pilot3
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas      6303 Jun 22 19:28 init_data.xml
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas 342763348 Jun 22 19:28 HITS.38921013._054047.pool.root.1
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas       532 Jun 22 19:29 boinc_task_state.xml
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas      1073 Jun 22 19:29 memory_monitor_summary.json
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas         0 Jun 22 19:29 agis_ddmendpoints.agis.ALL.json
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas    385104 Jun 22 19:29 log.38921013._054047.job.log.tgz.1
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas      7734 Jun 22 19:29 heartbeat.json
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas        95 Jun 22 19:29 pilot_heartbeat.json
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 19:29 boinc_mmap_file
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas        28 Jun 22 19:29 wrapper_checkpoint.txt
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas      4284 Jun 22 19:29 pilotlog.txt
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas   1277912 Jun 22 19:29 log.38921013._054047.job.log.1
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas       357 Jun 22 19:29 output.list
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas       620 Jun 22 19:29 runtime_log
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas   1679360 Jun 22 19:29 result.tar.gz
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas     10995 Jun 22 19:29 runtime_log.err
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas       649 Jun 22 19:29 4lNMDme2Lf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm6vnKDmrO9hnm.diag
[2024-06-22 19:29:51] -rw-r--r-- 1 boincer umatlas     21583 Jun 22 19:29 stderr.txt
[2024-06-22 19:29:51] HITS file was successfully produced:
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas 342763348 Jun 22 19:28 shared/HITS.pool.root.1
[2024-06-22 19:29:51]  *** Contents of shared directory: ***
[2024-06-22 19:29:51] total 863480
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas 539243901 Jun 22 15:58 ATLAS.root_0
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 15:58 start_atlas.sh
[2024-06-22 19:29:51] -rw-r--r-- 2 boincer umatlas    482529 Jun 22 15:58 input.tar.gz
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas 342763348 Jun 22 19:28 HITS.pool.root.1
[2024-06-22 19:29:51] -rw------- 1 boincer umatlas   1679360 Jun 22 19:29 result.tar.gz
19:29:53 (10725): run_atlas exited; CPU time 91833.225155
19:29:53 (10725): called boinc_finish(0)

</stderr_txt>
]]>

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