Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-25 04:05:56 (21068): Detected: vboxwrapper 26206
2024-06-25 04:05:56 (21068): Detected: BOINC client v7.16.5
2024-06-25 04:05:57 (21068): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2024-06-25 04:05:57 (21068): Successfully copied 'init_data.xml' to the shared directory.
2024-06-25 04:05:58 (21068): Create VM. (boinc_1cdfce0b46a5ef19, slot#4)
2024-06-25 04:05:58 (21068): Setting Memory Size for VM. (4400MB)
2024-06-25 04:05:58 (21068): Setting CPU Count for VM. (4)
2024-06-25 04:05:59 (21068): Setting Chipset Options for VM.
2024-06-25 04:05:59 (21068): Setting Graphics Controller Options for VM.
2024-06-25 04:05:59 (21068): Setting Boot Options for VM.
2024-06-25 04:05:59 (21068): Setting Network Configuration for NAT.
2024-06-25 04:06:00 (21068): Enabling VM Network Access.
2024-06-25 04:06:00 (21068): Disabling USB Support for VM.
2024-06-25 04:06:00 (21068): Disabling COM Port Support for VM.
2024-06-25 04:06:00 (21068): Disabling LPT Port Support for VM.
2024-06-25 04:06:01 (21068): Disabling Audio Support for VM.
2024-06-25 04:06:01 (21068): Disabling Clipboard Support for VM.
2024-06-25 04:06:01 (21068): Disabling Drag and Drop Support for VM.
2024-06-25 04:06:01 (21068): Adding storage controller(s) to VM.
2024-06-25 04:06:02 (21068): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-25 04:06:02 (21068): Adding VirtualBox Guest Additions to VM.
2024-06-25 04:06:02 (21068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-25 04:06:03 (21068): forwarding host port 59274 to guest port 80
2024-06-25 04:06:03 (21068): Enabling remote desktop for VM.
2024-06-25 04:06:04 (21068): Enabling shared directory for VM.
2024-06-25 04:06:04 (21068): Starting VM using VBoxManage interface. (boinc_1cdfce0b46a5ef19, slot#4)
2024-06-25 04:06:09 (21068): Successfully started VM. (PID = '22276')
2024-06-25 04:06:09 (21068): Reporting VM Process ID to BOINC.
2024-06-25 04:06:09 (21068): Guest Log: BIOS: VirtualBox 5.2.44
2024-06-25 04:06:09 (21068): Guest Log: CPUID EDX: 0x178bfbff
2024-06-25 04:06:09 (21068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-25 04:06:09 (21068): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-25 04:06:09 (21068): Detected: Web Application Enabled (http://localhost:59274)
2024-06-25 04:06:09 (21068): Detected: Remote Desktop Enabled (localhost:59275)
2024-06-25 04:06:09 (21068): Preference change detected
2024-06-25 04:06:09 (21068): Setting CPU throttle for VM. (100%)
2024-06-25 04:06:09 (21068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-25 04:06:11 (21068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-25 04:06:11 (21068): Guest Log: BIOS: Booting from Hard Disk...
2024-06-25 04:06:14 (21068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-25 04:06:14 (21068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-25 04:06:14 (21068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-25 04:06:20 (21068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-25 04:06:20 (21068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-25 04:06:27 (21068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000203 main     Log opened 2024-06-25T04:06:24.908914000Z
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000321 main     OS Product: Linux
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000391 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000425 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000453 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000465 main     Process ID: 1301
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.000466 main     Package type: LINUX_64BITS_GENERIC
2024-06-25 04:06:27 (21068): Guest Log: 00:00:00.001554 main     5.2.32 r132073 started. Verbose level = 0
2024-06-25 04:06:27 (21068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-25 04:06:27 (21068): Guest Log: [INFO] Mounting shared directory
2024-06-25 04:06:27 (21068): Guest Log: [INFO] Checking for init_data.xml
2024-06-25 04:06:37 (21068): Guest Log: 00:00:10.005655 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 476 162 000ns (GuestNow=1 719 277 596 436 080 000 ns GuestLast=1 719 288 384 912 242 000 ns fSetTimeLastLoop=true )
2024-06-25 04:08:09 (21068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-25 04:08:09 (21068): Guest Log: [INFO] Detected branch: prod
2024-06-25 04:08:09 (21068): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-25 04:08:09 (21068): Guest Log: Copying input files
2024-06-25 04:08:14 (21068): Guest Log: Copied input files into RunAtlas.
2024-06-25 04:08:14 (21068): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-25 04:08:14 (21068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-25 04:08:14 (21068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-25 04:08:14 (21068): Guest Log: Further information can be found at the LHC@home message board.
2024-06-25 04:10:13 (21068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-25 04:10:13 (21068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-25 04:10:13 (21068): Guest Log: 2.6.3.0 1613 2 32196 134255 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-25 04:10:14 (21068): Guest Log: copied the webapp to /var/www
2024-06-25 04:10:14 (21068): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-25 04:10:14 (21068): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-25 04:10:14 (21068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-25 04:10:14 (21068): Guest Log:  *** Starting ATLAS job. (PandaID=6241645771 taskID=38921013) ***
2024-06-25 05:46:12 (21068): Status Report: Elapsed Time: '6000.000000'
2024-06-25 05:46:12 (21068): Status Report: CPU Time: '17117.796875'
2024-06-25 07:26:16 (21068): Status Report: Elapsed Time: '12000.000000'
2024-06-25 07:26:16 (21068): Status Report: CPU Time: '40311.203125'
2024-06-25 09:06:19 (21068): Status Report: Elapsed Time: '18000.000000'
2024-06-25 09:06:19 (21068): Status Report: CPU Time: '61917.359375'
2024-06-25 10:46:23 (21068): Status Report: Elapsed Time: '24000.000000'
2024-06-25 10:46:23 (21068): Status Report: CPU Time: '82467.453125'
2024-06-25 12:26:27 (21068): Status Report: Elapsed Time: '30000.000000'
2024-06-25 12:26:27 (21068): Status Report: CPU Time: '106385.718750'
2024-06-25 14:06:31 (21068): Status Report: Elapsed Time: '36000.000000'
2024-06-25 14:06:31 (21068): Status Report: CPU Time: '130289.484375'
2024-06-25 15:46:34 (21068): Status Report: Elapsed Time: '42000.000000'
2024-06-25 15:46:34 (21068): Status Report: CPU Time: '154161.078125'
2024-06-25 17:26:38 (21068): Status Report: Elapsed Time: '48000.000000'
2024-06-25 17:26:38 (21068): Status Report: CPU Time: '176468.453125'
2024-06-25 19:06:42 (21068): Status Report: Elapsed Time: '54000.000000'
2024-06-25 19:06:42 (21068): Status Report: CPU Time: '200313.734375'
2024-06-25 19:13:30 (21068): Guest Log:  *** Job finished ***
2024-06-25 19:13:30 (21068): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:15,476 | INFO     | [data] queue_monitor thread has finished
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:21,514 | INFO     | job.realtimelogging is not enabled
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:22,516 | INFO     | [payload] run_realtimelog thread has finished
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:24,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443042277184)>', '<ExcThread(monitor, started 140441915737856)>']
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:25,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:25,369 | INFO     | [monitor] control thread has ended
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,387 | INFO     | all workflow threads have been joined
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,387 | INFO     | end of generic workflow (traces error code: 0)
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,388 | INFO     | traces error code: 0
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,695 [wrapper] ==== pilot stdout END ====
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,700 [wrapper] ==== wrapper stdout RESUME ====
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,706 [wrapper] pilotpid: 6516
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,712 [wrapper] Pilot exit status: 0
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,786 [wrapper] pandaids: 6241645771
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,820 [wrapper] cleanup supervisor_pilot 13846 6517
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,825 [wrapper] Test setup, not cleaning
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,831 [wrapper] ==== wrapper stdout END ====
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,836 [wrapper] ==== wrapper stderr END ====
2024-06-25 19:13:30 (21068): Guest Log: 2024-06-25 16:13:29,847 [wrapper] apfmon messages muted
2024-06-25 19:13:30 (21068): Guest Log:  *** Error codes and diagnostics ***
2024-06-25 19:13:30 (21068): Guest Log:     "exeErrorCode": 0,
2024-06-25 19:13:30 (21068): Guest Log:     "exeErrorDiag": "",
2024-06-25 19:13:30 (21068): Guest Log:     "pilotErrorCode": 0,
2024-06-25 19:13:30 (21068): Guest Log:     "pilotErrorDiag": "",
2024-06-25 19:13:30 (21068): Guest Log:  *** Listing of results directory ***
2024-06-25 19:13:30 (21068): Guest Log: total 350228
2024-06-25 19:13:30 (21068): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 22 19:37 pilot3.tar.gz
2024-06-25 19:13:30 (21068): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 22 19:44 runpilot2-wrapper.sh
2024-06-25 19:13:30 (21068): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 22 19:44 queuedata.json
2024-06-25 19:13:30 (21068): Guest Log: -rwxr-xr-x. 1 atlas atlas      8879 Jun 25 01:08 init_data.xml
2024-06-25 19:13:30 (21068): Guest Log: -rwxr-xr-x. 1 atlas atlas    482516 Jun 25 01:08 input.tar.gz
2024-06-25 19:13:30 (21068): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 25 01:08 start_atlas.sh
2024-06-25 19:13:30 (21068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 25 01:08 EVNT.38776210._000885.pool.root.1 -> /data/./ATLAS.root_0
2024-06-25 19:13:30 (21068): Guest Log: -rw-r--r--. 1 atlas atlas      2646 Jun 25 01:10 pandaJob.out
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas       424 Jun 25 01:10 setup.sh.local
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas   1022415 Jun 25 01:11 agis_schedconf.cvmfs.json
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 25 01:11 cric_ddmendpoints.json
2024-06-25 19:13:30 (21068): Guest Log: drwx------. 4 atlas atlas      4096 Jun 25 01:11 pilot3
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas 341522698 Jun 25 16:12 HITS.38921013._054022.pool.root.1
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas        95 Jun 25 16:12 pilot_heartbeat.json
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 25 16:12 memory_monitor_summary.json
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas         0 Jun 25 16:12 agis_ddmendpoints.agis.ALL.json
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas    716171 Jun 25 16:12 log.38921013._054022.job.log.tgz.1
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas      7747 Jun 25 16:13 heartbeat.json
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 25 16:13 pilotlog.txt
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas   6110041 Jun 25 16:13 log.38921013._054022.job.log.1
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas       357 Jun 25 16:13 output.list
2024-06-25 19:13:30 (21068): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 25 16:13 runtime_log
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas   6840320 Jun 25 16:13 result.tar.gz
2024-06-25 19:13:30 (21068): Guest Log: -rw-r--r--. 1 atlas atlas     10967 Jun 25 16:13 runtime_log.err
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas       663 Jun 25 16:13 QcqMDmnpLf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmeirKDmi2bgrn.diag
2024-06-25 19:13:30 (21068): Guest Log: Looking for outputfile HITS.38921013._054022.pool.root.1
2024-06-25 19:13:30 (21068): Guest Log: HITS file was successfully produced
2024-06-25 19:13:30 (21068): Guest Log: -rw-------. 1 atlas atlas 341522698 Jun 25 16:12 /home/atlas/RunAtlas/HITS.38921013._054022.pool.root.1
2024-06-25 19:13:32 (21068): Guest Log: Successfully finished the ATLAS job!
2024-06-25 19:13:32 (21068): Guest Log: Copying the results back to the shared directory!
2024-06-25 19:13:32 (21068): Guest Log:  *** Contents of shared directory: ***
2024-06-25 19:13:32 (21068): Guest Log: total 870284
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root 542287392 Jun 25 01:05 ATLAS.root_0
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root 341522698 Jun 25 16:13 HITS.pool.root.1
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root      8879 Jun 25 01:05 init_data.xml
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root    482516 Jun 22 19:45 input.tar.gz
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root   6840320 Jun 25 16:13 result.tar.gz
2024-06-25 19:13:32 (21068): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 22 19:45 start_atlas.sh
2024-06-25 19:13:32 (21068): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-25 19:13:32 (21068): VM Completion File Detected.
2024-06-25 19:13:32 (21068): Powering off VM.
2024-06-25 19:13:33 (21068): Successfully stopped VM.
2024-06-25 19:13:33 (21068): Deregistering VM. (boinc_1cdfce0b46a5ef19, slot#4)
2024-06-25 19:13:33 (21068): Removing network bandwidth throttle group from VM.
2024-06-25 19:13:33 (21068): Removing VM from VirtualBox.
19:13:38 (21068): called boinc_finish(0)

</stderr_txt>
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