Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:29 (647744): wrapper (7.7.26015): starting
21:18:29 (647744): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 21:18:29] Arguments: --nthreads 4
[2024-06-22 21:18:29] Threads: 4
[2024-06-22 21:18:29] Checking for CVMFS
[2024-06-22 21:18:29] No cvmfs_config command found, will try listing directly
[2024-06-22 21:18:30] CVMFS is ok
[2024-06-22 21:18:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 21:18:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 21:18:30] Further information can be found at the LHC@home message board.
[2024-06-22 21:18:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 21:18:30] Checking for apptainer binary...
[2024-06-22 21:18:30] which: no apptainer in ((null))
[2024-06-22 21:18:30] apptainer is not installed, using version from CVMFS
[2024-06-22 21:18:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 21:18:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 21:18:30] apptainer works
[2024-06-22 21:18:30] Set ATHENA_PROC_NUMBER=4
[2024-06-22 21:18:30] Set ATHENA_CORE_NUMBER=4
[2024-06-22 21:18:30] Starting ATLAS job with PandaID=6241626273
[2024-06-22 21:18:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:19:44]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:19:44] 2024-06-22 19:19:29,208 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 21:19:44] 2024-06-22 19:19:29,208 | INFO     | using path: /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241626273/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard info from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | found no stored workdir sizes
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | WARNING  | wrong length of table data, x=[1719083944.0], y=[1656.0] (must be same and length>=4)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . Timing measurements:
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . get job = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . initial setup = 1 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload setup = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-in = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload execution = 15 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-out = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . log creation = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241626273/pilotlog.txt
[2024-06-22 21:19:44] 2024-06-22 19:19:29,225 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 21:19:44] - Log from pilotlog.txt -
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard info from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | found no stored workdir sizes
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | WARNING  | wrong length of table data, x=[1719083944.0], y=[1656.0] (must be same and length>=4)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . Timing measurements:
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . get job = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . initial setup = 1 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload setup = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-in = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload execution = 15 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-out = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . log creation = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241626273/pilotlog.txt
[2024-06-22 21:19:44] 2024-06-22 19:19:29,225 | WARNING  | 
[2024-06-22 21:19:44] [begin log extracts]
[2024-06-22 21:19:44] - Log from pilotlog.txt -
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard info from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | WARNING  | found no stored workdir sizes
[2024-06-22 21:19:44] 2024-06-22 19:19:29,209 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | WARNING  | wrong length of table data, x=[1719083944.0], y=[1656.0] (must be same and length>=4)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . Timing measurements:
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . get job = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . initial setup = 1 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload setup = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-in = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . payload execution = 15 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . stage-out = 5 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | . log creation = 0 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | ..............................
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:19:44] 2024-06-22 19:19:29,210 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241626273/pilotlog.txt
[2024-06-22 21:19:44] [end log extracts]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,226 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,226 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:19:12,061 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 21:19:44] 2024-06-22 19:19:29,576 | INFO     | 
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | job summary report
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | --------------------------------------------------
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | PanDA job id: 6241626273
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | task id: 38920982
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:19:12,061 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | pilot state: failed 
[2024-06-22 21:19:44] 2024-06-22 19:19:29,577 | INFO     | transexitcode: 65
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | exeerrorcode: 65
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | exitcode: 65
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | cpuconsumptiontime: 20 s
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | nevents: 0
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | neventsw: 0
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | pid: 662211
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | pgrp: 662211
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | corecount: 4
[2024-06-22 21:19:44] 2024-06-22 19:19:29,578 | INFO     | event service: False
[2024-06-22 21:19:44] 2024-06-22 19:19:29,579 | INFO     | sizes: {0: 2386239, 1: 2387174, 5: 2387380, 12: 2387408, 25: 2410531, 27: 2414767, 28: 2414923, 30: 2414951, 31: 2414979, 32: 2414951, 35: 2415149}
[2024-06-22 21:19:44] 2024-06-22 19:19:29,579 | INFO     | --------------------------------------------------
[2024-06-22 21:19:44] 2024-06-22 19:19:29,579 | INFO     | 
[2024-06-22 21:19:44] 2024-06-22 19:19:29,579 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | job 6241626273 has completed (purged errors)
[2024-06-22 21:19:44] 2024-06-22 19:19:29,600 | INFO     | overall cleanup function is called
[2024-06-22 21:19:44] 2024-06-22 19:19:30,601 | INFO     | --- collectZombieJob: --- 10, [662211]
[2024-06-22 21:19:44] 2024-06-22 19:19:30,601 | INFO     | zombie collector waiting for pid 662211
[2024-06-22 21:19:44] 2024-06-22 19:19:30,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:19:44] 2024-06-22 19:19:31,606 | INFO     | collected zombie processes
[2024-06-22 21:19:44] 2024-06-22 19:19:31,606 | INFO     | will now attempt to kill all subprocesses of pid=662211
[2024-06-22 21:19:44] 2024-06-22 19:19:31,781 | INFO     | process IDs to be killed: [662211] (in reverse order)
[2024-06-22 21:19:44] 2024-06-22 19:19:31,861 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:19:44] 2024-06-22 19:19:31,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:19:44] 2024-06-22 19:19:31,877 | INFO     | did not find any defunct processes belonging to 662211
[2024-06-22 21:19:44] 2024-06-22 19:19:31,887 | INFO     | did not find any defunct processes belonging to 662211
[2024-06-22 21:19:44] 2024-06-22 19:19:31,888 | INFO     | ready for new job
[2024-06-22 21:19:44] 2024-06-22 19:19:31,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:19:44] 2024-06-22 19:19:31,889 | INFO     | *************************************
[2024-06-22 21:19:44] 2024-06-22 19:19:31,889 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:19:44] 2024-06-22 19:19:31,889 | INFO     | *************************************
[2024-06-22 21:19:44] 2024-06-22 19:19:31,889 | INFO     | 
[2024-06-22 21:19:44] 2024-06-22 19:19:31,898 | INFO     | architecture information:
[2024-06-22 21:19:44] 2024-06-22 19:19:31,898 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:19:44] 2024-06-22 19:19:31,913 | INFO     | cat /etc/os-release:
[2024-06-22 21:19:44] NAME="CentOS Linux"
[2024-06-22 21:19:44] VERSION="7 (Core)"
[2024-06-22 21:19:44] ID="centos"
[2024-06-22 21:19:44] ID_LIKE="rhel fedora"
[2024-06-22 21:19:44] VERSION_ID="7"
[2024-06-22 21:19:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:19:44] ANSI_COLOR="0;31"
[2024-06-22 21:19:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:19:44] HOME_URL="https://www.centos.org/"
[2024-06-22 21:19:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:19:44] 
[2024-06-22 21:19:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:19:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:19:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:19:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:19:44] 
[2024-06-22 21:19:44] 2024-06-22 19:19:31,913 | INFO     | *************************************
[2024-06-22 21:19:44] 2024-06-22 19:19:32,416 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-06-22 21:19:44] 2024-06-22 19:19:32,434 | INFO     | sufficient remaining disk space (3182406139904 B)
[2024-06-22 21:19:44] 2024-06-22 19:19:32,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:19:44] 2024-06-22 19:19:32,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:19:44] 2024-06-22 19:19:32,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:19:44] 2024-06-22 19:19:32,462 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:19:44] 2024-06-22 19:19:32,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:19:44] 2024-06-22 19:19:32,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:19:44] 2024-06-22 19:19:33,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:19:44] 2024-06-22 19:19:33,163 | INFO     | aborting loop
[2024-06-22 21:19:44] 2024-06-22 19:19:33,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:19:44] 2024-06-22 19:19:33,440 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,495 | INFO     | all data control threads have been joined
[2024-06-22 21:19:44] 2024-06-22 19:19:33,563 | INFO     | all payload control threads have been joined
[2024-06-22 21:19:44] 2024-06-22 19:19:33,626 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,648 | INFO     | [job] validate thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,659 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,819 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,851 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:33,952 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:34,003 | INFO     | all job control threads have been joined
[2024-06-22 21:19:44] 2024-06-22 19:19:34,112 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:34,168 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:34,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:19:44] 2024-06-22 19:19:34,500 | INFO     | [data] control thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:34,569 | INFO     | [payload] control thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:34,819 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:35,008 | INFO     | [job] control thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:35,331 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:35,352 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:36,441 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:19:44] 2024-06-22 19:19:38,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47314116916288)>', '<ExcThread(monitor, started 47314323056384)>']
[2024-06-22 21:19:44] 2024-06-22 19:19:38,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:19:44] 2024-06-22 19:19:38,493 | INFO     | [monitor] control thread has ended
[2024-06-22 21:19:44] 2024-06-22 19:19:43,088 | INFO     | all workflow threads have been joined
[2024-06-22 21:19:44] 2024-06-22 19:19:43,088 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:19:44] 2024-06-22 19:19:43,088 | INFO     | traces error code: 0
[2024-06-22 21:19:44] 2024-06-22 19:19:43,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:19:44] 2024-06-22 19:19:43,211 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:19:44] 2024-06-22 19:19:43,214 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:19:44] 2024-06-22 19:19:43,216 [wrapper] pilotpid: 654738
[2024-06-22 21:19:44] 2024-06-22 19:19:43,218 [wrapper] Pilot exit status: 0
[2024-06-22 21:19:44] 2024-06-22 19:19:43,226 [wrapper] pandaids: 6241626273
[2024-06-22 21:19:44] 2024-06-22 19:19:43,314 [wrapper] cleanup supervisor_pilot  654743 654739
[2024-06-22 21:19:44] 2024-06-22 19:19:43,316 [wrapper] Test setup, not cleaning
[2024-06-22 21:19:44] 2024-06-22 19:19:43,318 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:19:44] 2024-06-22 19:19:43,321 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:19:44] 2024-06-22 19:19:43,325 [wrapper] apfmon messages muted
[2024-06-22 21:19:44]  *** Error codes and diagnostics ***
[2024-06-22 21:19:44]     "exeErrorCode": 65,
[2024-06-22 21:19:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 21:19:44]     "pilotErrorCode": 1305,
[2024-06-22 21:19:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:19:12,061 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 21:19:44]  *** Listing of results directory ***
[2024-06-22 21:19:44] total 623248
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc    469766 Jun 22 20:30 pilot3.tar.gz
[2024-06-22 21:19:44] -rwx------ 1 boinc boinc     32308 Jun 22 20:58 runpilot2-wrapper.sh
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc      5654 Jun 22 20:58 queuedata.json
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc       100 Jun 22 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:19:44] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 21:02 run_atlas
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc       105 Jun 22 21:02 job.xml
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc      6642 Jun 22 21:18 init_data.xml
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc 634501158 Jun 22 21:18 EVNT.38776160._000761.pool.root.1
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc     17537 Jun 22 21:18 start_atlas.sh
[2024-06-22 21:19:44] drwxrwx--x 2 boinc boinc      4096 Jun 22 21:18 shared
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc    482526 Jun 22 21:18 input.tar.gz
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc         0 Jun 22 21:18 boinc_lockfile
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc      2629 Jun 22 21:18 pandaJob.out
[2024-06-22 21:19:44] -rw------- 1 boinc boinc       424 Jun 22 21:18 setup.sh.local
[2024-06-22 21:19:44] -rw------- 1 boinc boinc   1025930 Jun 22 21:18 agis_schedconf.cvmfs.json
[2024-06-22 21:19:44] -rw------- 1 boinc boinc         0 Jun 22 21:18 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:19:44] -rw------- 1 boinc boinc   1321363 Jun 22 21:18 cric_ddmendpoints.json
[2024-06-22 21:19:44] -rw------- 1 boinc boinc        94 Jun 22 21:18 pilot_heartbeat.json
[2024-06-22 21:19:44] drwx------ 4 boinc boinc      4096 Jun 22 21:18 pilot3
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc       522 Jun 22 21:19 boinc_task_state.xml
[2024-06-22 21:19:44] -rw------- 1 boinc boinc       964 Jun 22 21:19 memory_monitor_summary.json
[2024-06-22 21:19:44] -rw------- 1 boinc boinc     20337 Jun 22 21:19 log.38920982._072054.job.log.tgz.1
[2024-06-22 21:19:44] -rw------- 1 boinc boinc      8323 Jun 22 21:19 heartbeat.json
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc      8192 Jun 22 21:19 boinc_mmap_file
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc        21 Jun 22 21:19 wrapper_checkpoint.txt
[2024-06-22 21:19:44] -rw------- 1 boinc boinc      4222 Jun 22 21:19 pilotlog.txt
[2024-06-22 21:19:44] -rw------- 1 boinc boinc     66255 Jun 22 21:19 log.38920982._072054.job.log.1
[2024-06-22 21:19:44] -rw------- 1 boinc boinc       188 Jun 22 21:19 output.list
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc       620 Jun 22 21:19 runtime_log
[2024-06-22 21:19:44] -rw------- 1 boinc boinc    102400 Jun 22 21:19 result.tar.gz
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc     11255 Jun 22 21:19 runtime_log.err
[2024-06-22 21:19:44] -rw------- 1 boinc boinc       633 Jun 22 21:19 UFqLDmQ7Kf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4snKDmhNcfCn.diag
[2024-06-22 21:19:44] -rw-r--r-- 1 boinc boinc     21382 Jun 22 21:19 stderr.txt
[2024-06-22 21:19:44] No HITS result produced
[2024-06-22 21:19:44]  *** Contents of shared directory: ***
[2024-06-22 21:19:44] total 620228
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc 634501158 Jun 22 21:18 ATLAS.root_0
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc     17537 Jun 22 21:18 start_atlas.sh
[2024-06-22 21:19:44] -rw-r--r-- 2 boinc boinc    482526 Jun 22 21:18 input.tar.gz
[2024-06-22 21:19:44] -rw------- 1 boinc boinc    102400 Jun 22 21:19 result.tar.gz
21:19:45 (647744): run_atlas exited; CPU time 20.361073
21:19:45 (647744): called boinc_finish(0)

</stderr_txt>
]]>

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