Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:29:28 (658575): wrapper (7.7.26015): starting
03:29:28 (658575): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 03:29:28] Arguments: --nthreads 12
[2024-06-23 03:29:28] Threads: 12
[2024-06-23 03:29:28] Checking for CVMFS
[2024-06-23 03:29:28] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 03:29:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 03:29:28] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 03:29:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 03:29:28] 2.11.2.0 2508 2536 77356 134194 3 55 3461141 4096000 0 65024 0 2262270 99.991 354761 1972 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-23 03:29:28] CVMFS is ok
[2024-06-23 03:29:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 03:29:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 03:29:28] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-23 03:29:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-23 03:29:28] Further information can be found at the LHC@home message board.
[2024-06-23 03:29:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 03:29:28] Checking for apptainer binary...
[2024-06-23 03:29:28] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 03:29:28] Running /usr/bin/apptainer --version
[2024-06-23 03:29:28] /usr/bin/apptainer: symbol lookup error: /usr/bin/apptainer: undefined symbol: seccomp_notify_respond
[2024-06-23 03:29:28] apptainer seems to be installed but not working
[2024-06-23 03:29:28] Will use version from CVMFS
[2024-06-23 03:29:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 03:29:29] sarnet8.local
[2024-06-23 03:29:29] apptainer works
[2024-06-23 03:29:29] Set ATHENA_PROC_NUMBER=12
[2024-06-23 03:29:29] Set ATHENA_CORE_NUMBER=12
[2024-06-23 03:29:29] Starting ATLAS job with PandaID=6241603456
[2024-06-23 03:29:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 06:29:52]  *** The last 200 lines of the pilot log: ***
[2024-06-23 06:29:52] 2024-06-23 10:29:39,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 06:29:52] 2024-06-23 10:29:39,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 06:29:52] 2024-06-23 10:29:39,256 | INFO     | fitting pss+swap vs Time
[2024-06-23 06:29:52] 2024-06-23 10:29:39,256 | INFO     | model: linear, x: [1719127797.0, 1719127858.0, 1719127919.0, 1719127980.0, 1719128041.0, 1719128102.0, 1719128163.0, 1719128224.0, 1719128285.0, 1719128346.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,256 | INFO     | sum of square deviations: 1719429448.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | sum of deviations: 36675636401.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | mean x: 1719133165.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | mean y: 2785895.9491525423
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | -- intersect: -36666530753.11661
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | intersect: -36666530753.11661
[2024-06-23 06:29:52] 2024-06-23 10:29:39,257 | INFO     | chi2: 4.861710301808106
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | model: linear, x: [1719127797.0, 1719127858.0, 1719127919.0, 1719127980.0, 1719128041.0, 1719128102.0, 1719128163.0, 1719128224.0, 1719128285.0, 1719128346.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | sum of square deviations: 1577789583.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | sum of deviations: 48607533745.499985
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | mean x: 1719133012.5
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | mean y: 2798433.0755813955
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | -- intersect: -52959153413.00705
[2024-06-23 06:29:52] 2024-06-23 10:29:39,258 | INFO     | intersect: -52959153413.00705
[2024-06-23 06:29:52] 2024-06-23 10:29:39,259 | INFO     | chi2: 4.1947897143410975
[2024-06-23 06:29:52] 2024-06-23 10:29:39,259 | INFO     | current chi2=4.1947897143410975 (change=13.71781834098539 %)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,259 | INFO     | right removable region: 171
[2024-06-23 06:29:52] 2024-06-23 10:29:39,259 | INFO     | model: linear, x: [1719128102.0, 1719128163.0, 1719128224.0, 1719128285.0, 1719128346.0, 1719128407.0, 1719128468.0, 1719128529.0, 1719128590.0, 1719128651.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,259 | INFO     | sum of square deviations: 1577789583.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | sum of deviations: -9787771531.00001
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | mean x: 1719133317.5
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | mean y: 2835731.930232558
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | -- intersect: 10667428985.883856
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | intersect: 10667428985.883856
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | chi2: 2.4748068357217408
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | current chi2=2.4748068357217408 (change=49.095962488728674 %)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | model: linear, x: [1719128407.0, 1719128468.0, 1719128529.0, 1719128590.0, 1719128651.0, 1719128712.0, 1719128773.0, 1719128834.0, 1719128895.0, 1719128956.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,260 | INFO     | sum of square deviations: 1444149868.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | sum of deviations: -45755053667.00001
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | mean x: 1719133470.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | mean y: 2876781.251497006
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | -- intersect: 54470246078.26267
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | intersect: 54470246078.26267
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | chi2: 1.1298490284697595
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | current chi2=1.1298490284697595 (change=54.34597108100132 %)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | model: linear, x: [1719128712.0, 1719128773.0, 1719128834.0, 1719128895.0, 1719128956.0, 1719129017.0, 1719129078.0, 1719129139.0, 1719129200.0, 1719129261.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,261 | INFO     | sum of square deviations: 1318277740.5
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | sum of deviations: -54792046653.00001
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | mean x: 1719133622.5
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | mean y: 2887660.012345679
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | -- intersect: 71455849925.03127
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | intersect: 71455849925.03127
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | chi2: 0.9647710573987319
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | current chi2=0.9647710573987319 (change=14.610622031034119 %)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,262 | INFO     | left removable region: 30
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | model: linear, x: [1719129627.0, 1719129688.0, 1719129749.0, 1719129810.0, 1719129871.0, 1719129932.0, 1719129993.0, 1719130054.0, 1719130115.0, 1719130176.0, 1719
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | sum of square deviations: 869188390.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | sum of deviations: -25451416130.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | mean x: 1719133897.0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | mean y: 2881364.609929078
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | -- intersect: 50342247029.325676
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | intersect: 50342247029.325676
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | chi2: 0.20030379454360164
[2024-06-23 06:29:52] 2024-06-23 10:29:39,263 | INFO     | -- intersect: 50342247029.325676
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | current memory leak: -29.28 B/s (using 141 data points, chi2=0.20)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | ..............................
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . Timing measurements:
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . get job = 0 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . initial setup = 1 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . payload setup = 3 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . stage-in = 0 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . payload execution = 10743 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . stage-out = 0 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | . log creation = 0 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,264 | INFO     | ..............................
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | 
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | job summary report
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | --------------------------------------------------
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | PanDA job id: 6241603456
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | task id: 38921013
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | errors: (none)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | pilot state: finished 
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | transexitcode: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | exeerrorcode: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,311 | INFO     | exeerrordiag: 
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | exitcode: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | exitmsg: OK
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | cpuconsumptiontime: 115116 s
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | nevents: 400
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | neventsw: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | pid: 669245
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | pgrp: 669245
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | corecount: 12
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | event service: False
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | sizes: {0: 2385604, 1: 2387140, 3: 2387346, 11: 2387374, 10751: 2416127, 10752: 2425087, 10755: 2425271, 10789: 2425441}
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | --------------------------------------------------
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | 
[2024-06-23 06:29:52] 2024-06-23 10:29:39,312 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 06:29:52] 2024-06-23 10:29:39,333 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,333 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,333 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,333 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | job 6241603456 has completed (purged errors)
[2024-06-23 06:29:52] 2024-06-23 10:29:39,334 | INFO     | overall cleanup function is called
[2024-06-23 06:29:52] 2024-06-23 10:29:40,342 | INFO     | --- collectZombieJob: --- 10, [669245]
[2024-06-23 06:29:52] 2024-06-23 10:29:40,342 | INFO     | zombie collector waiting for pid 669245
[2024-06-23 06:29:52] 2024-06-23 10:29:40,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 06:29:52] 2024-06-23 10:29:41,347 | INFO     | collected zombie processes
[2024-06-23 06:29:52] 2024-06-23 10:29:41,347 | INFO     | will now attempt to kill all subprocesses of pid=669245
[2024-06-23 06:29:52] 2024-06-23 10:29:41,398 | INFO     | process IDs to be killed: [669245] (in reverse order)
[2024-06-23 06:29:52] 2024-06-23 10:29:41,432 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 06:29:52] 2024-06-23 10:29:41,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 06:29:52] 2024-06-23 10:29:41,433 | INFO     | did not find any defunct processes belonging to 669245
[2024-06-23 06:29:52] 2024-06-23 10:29:41,435 | INFO     | did not find any defunct processes belonging to 669245
[2024-06-23 06:29:52] 2024-06-23 10:29:41,435 | INFO     | ready for new job
[2024-06-23 06:29:52] 2024-06-23 10:29:41,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 06:29:52] 2024-06-23 10:29:41,436 | INFO     | *************************************
[2024-06-23 06:29:52] 2024-06-23 10:29:41,436 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 06:29:52] 2024-06-23 10:29:41,436 | INFO     | *************************************
[2024-06-23 06:29:52] 2024-06-23 10:29:41,437 | INFO     | 
[2024-06-23 06:29:52] 2024-06-23 10:29:41,437 | INFO     | pilot is running in a VM
[2024-06-23 06:29:52] 2024-06-23 10:29:41,437 | INFO     | architecture information:
[2024-06-23 06:29:52] 2024-06-23 10:29:41,437 | INFO     | executing command: cat /etc/os-release
[2024-06-23 06:29:52] 2024-06-23 10:29:41,452 | INFO     | cat /etc/os-release:
[2024-06-23 06:29:52] NAME="CentOS Linux"
[2024-06-23 06:29:52] VERSION="7 (Core)"
[2024-06-23 06:29:52] ID="centos"
[2024-06-23 06:29:52] ID_LIKE="rhel fedora"
[2024-06-23 06:29:52] VERSION_ID="7"
[2024-06-23 06:29:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 06:29:52] ANSI_COLOR="0;31"
[2024-06-23 06:29:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 06:29:52] HOME_URL="https://www.centos.org/"
[2024-06-23 06:29:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 06:29:52] 
[2024-06-23 06:29:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 06:29:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 06:29:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 06:29:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 06:29:52] 
[2024-06-23 06:29:52] 2024-06-23 10:29:41,452 | INFO     | *************************************
[2024-06-23 06:29:52] 2024-06-23 10:29:41,955 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 06:29:52] 2024-06-23 10:29:41,974 | INFO     | sufficient remaining disk space (30858543104 B)
[2024-06-23 06:29:52] 2024-06-23 10:29:41,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 06:29:52] 2024-06-23 10:29:41,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 06:29:52] 2024-06-23 10:29:42,138 | INFO     | all payload control threads have been joined
[2024-06-23 06:29:52] 2024-06-23 10:29:42,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 06:29:52] 2024-06-23 10:29:42,145 | INFO     | aborting loop
[2024-06-23 06:29:52] 2024-06-23 10:29:42,241 | INFO     | all data control threads have been joined
[2024-06-23 06:29:52] 2024-06-23 10:29:42,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 06:29:52] 2024-06-23 10:29:42,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 06:29:52] 2024-06-23 10:29:42,509 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 06:29:52] 2024-06-23 10:29:42,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 06:29:52] 2024-06-23 10:29:42,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 06:29:52] 2024-06-23 10:29:42,980 | INFO     | [job] retrieve thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,084 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,144 | INFO     | [payload] control thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,150 | INFO     | [job] job monitor thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,247 | INFO     | [data] control thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,423 | INFO     | [data] copytool_in thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,461 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,571 | INFO     | all job control threads have been joined
[2024-06-23 06:29:52] 2024-06-23 10:29:43,706 | INFO     | [payload] validate_post thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:43,813 | INFO     | [payload] failed_post thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:44,051 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:44,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 06:29:52] 2024-06-23 10:29:44,331 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:44,362 | INFO     | [job] validate thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:44,436 | INFO     | [data] copytool_out thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:44,577 | INFO     | [job] control thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:45,327 | INFO     | [job] queue monitor thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:46,431 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 06:29:52] 2024-06-23 10:29:46,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247416334144)>', '<ExcThread(monitor, started 140246838662912)>']
[2024-06-23 06:29:52] 2024-06-23 10:29:47,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 06:29:52] 2024-06-23 10:29:47,535 | INFO     | [monitor] control thread has ended
[2024-06-23 06:29:52] 2024-06-23 10:29:51,628 | INFO     | all workflow threads have been joined
[2024-06-23 06:29:52] 2024-06-23 10:29:51,629 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 06:29:52] 2024-06-23 10:29:51,629 | INFO     | traces error code: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:51,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 06:29:52] 2024-06-23 10:29:51,696 [wrapper] ==== pilot stdout END ====
[2024-06-23 06:29:52] 2024-06-23 10:29:51,697 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 06:29:52] 2024-06-23 10:29:51,699 [wrapper] pilotpid: 662769
[2024-06-23 06:29:52] 2024-06-23 10:29:51,701 [wrapper] Pilot exit status: 0
[2024-06-23 06:29:52] 2024-06-23 10:29:51,708 [wrapper] pandaids: 6241603456
[2024-06-23 06:29:52] 2024-06-23 10:29:51,726 [wrapper] cleanup supervisor_pilot  697047 662770
[2024-06-23 06:29:52] 2024-06-23 10:29:51,728 [wrapper] Test setup, not cleaning
[2024-06-23 06:29:52] 2024-06-23 10:29:51,730 [wrapper] ==== wrapper stdout END ====
[2024-06-23 06:29:52] 2024-06-23 10:29:51,732 [wrapper] ==== wrapper stderr END ====
[2024-06-23 06:29:52] 2024-06-23 10:29:51,736 [wrapper] apfmon messages muted
[2024-06-23 06:29:52]  *** Error codes and diagnostics ***
[2024-06-23 06:29:52]     "exeErrorCode": 0,
[2024-06-23 06:29:52]     "exeErrorDiag": "",
[2024-06-23 06:29:52]     "pilotErrorCode": 0,
[2024-06-23 06:29:52]     "pilotErrorDiag": "",
[2024-06-23 06:29:52]  *** Listing of results directory ***
[2024-06-23 06:29:52] total 871688
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc    479503 Jun 21 03:51 pilot3.tar.gz
[2024-06-23 06:29:52] -rwx------. 1 boinc boinc     32308 Jun 22 14:20 runpilot2-wrapper.sh
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc      5654 Jun 22 14:20 queuedata.json
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc       100 Jun 23 03:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 06:29:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun 23 03:29 run_atlas
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc       105 Jun 23 03:29 job.xml
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc     17537 Jun 23 03:29 start_atlas.sh
[2024-06-23 06:29:52] drwxrwx--x. 2 boinc boinc        68 Jun 23 03:29 shared
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc    492570 Jun 23 03:29 input.tar.gz
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc      6167 Jun 23 03:29 init_data.xml
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc 542630118 Jun 23 03:29 EVNT.38776210._000944.pool.root.1
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc         0 Jun 23 03:29 boinc_lockfile
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc      2648 Jun 23 03:29 pandaJob.out
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc       424 Jun 23 03:29 setup.sh.local
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc   1025270 Jun 23 03:29 agis_schedconf.cvmfs.json
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc         0 Jun 23 03:29 agis_ddmendpoints.agis.ALL.json
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc   1321363 Jun 23 03:29 cric_ddmendpoints.json
[2024-06-23 06:29:52] drwx------. 6 boinc boinc      4096 Jun 23 03:29 pilot3
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc       533 Jun 23 06:28 boinc_task_state.xml
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc 343642806 Jun 23 06:28 HITS.38921013._053882.pool.root.1
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc      1040 Jun 23 06:28 memory_monitor_summary.json
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc    433006 Jun 23 06:29 log.38921013._053882.job.log.tgz.1
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc        95 Jun 23 06:29 pilot_heartbeat.json
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc      8192 Jun 23 06:29 boinc_mmap_file
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc        29 Jun 23 06:29 wrapper_checkpoint.txt
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc      7753 Jun 23 06:29 heartbeat.json
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc      4273 Jun 23 06:29 pilotlog.txt
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc    959189 Jun 23 06:29 log.38921013._053882.job.log.1
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc       357 Jun 23 06:29 output.list
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc       620 Jun 23 06:29 runtime_log
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc   1413120 Jun 23 06:29 result.tar.gz
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc     10989 Jun 23 06:29 runtime_log.err
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc       650 Jun 23 06:29 6JeLDmCXKf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmZlYKDmJxKrzn.diag
[2024-06-23 06:29:52] -rw-r--r--. 1 boinc boinc     21976 Jun 23 06:29 stderr.txt
[2024-06-23 06:29:52] HITS file was successfully produced:
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc 343642806 Jun 23 06:28 shared/HITS.pool.root.1
[2024-06-23 06:29:52]  *** Contents of shared directory: ***
[2024-06-23 06:29:52] total 867392
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc     17537 Jun 23 03:29 start_atlas.sh
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc    492570 Jun 23 03:29 input.tar.gz
[2024-06-23 06:29:52] -rw-r--r--. 2 boinc boinc 542630118 Jun 23 03:29 ATLAS.root_0
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc 343642806 Jun 23 06:28 HITS.pool.root.1
[2024-06-23 06:29:52] -rw-------. 1 boinc boinc   1413120 Jun 23 06:29 result.tar.gz
06:29:53 (658575): run_atlas exited; CPU time 115081.579547
06:29:53 (658575): called boinc_finish(0)

</stderr_txt>
]]>

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