Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:12:04 (2546017): wrapper (7.7.26015): starting
20:12:04 (2546017): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 20:12:04] Arguments: --nthreads 4
[2024-06-22 20:12:04] Threads: 4
[2024-06-22 20:12:04] Checking for CVMFS
[2024-06-22 20:12:04] No cvmfs_config command found, will try listing directly
[2024-06-22 20:12:04] CVMFS is ok
[2024-06-22 20:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 20:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 20:12:04] Further information can be found at the LHC@home message board.
[2024-06-22 20:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 20:12:04] Checking for apptainer binary...
[2024-06-22 20:12:04] which: no apptainer in ((null))
[2024-06-22 20:12:04] apptainer is not installed, using version from CVMFS
[2024-06-22 20:12:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 20:12:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-22 20:12:05] apptainer works
[2024-06-22 20:12:05] Set ATHENA_PROC_NUMBER=4
[2024-06-22 20:12:05] Set ATHENA_CORE_NUMBER=4
[2024-06-22 20:12:05] Starting ATLAS job with PandaID=6241537706
[2024-06-22 20:12:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 20:15:48]  *** The last 200 lines of the pilot log: ***
[2024-06-22 20:15:48] 2024-06-22 18:15:33,993 | INFO     | using path: /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241537706/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard info from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | found no stored workdir sizes
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | WARNING  | wrong length of table data, x=[1719079964.0], y=[1544.0] (must be same and length>=4)
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . Timing measurements:
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . get job = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . initial setup = 6 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload setup = 5 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . stage-in = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload execution = 16 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . stage-out = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . log creation = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241537706/pilotlog.txt
[2024-06-22 20:15:48] 2024-06-22 18:15:34,013 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 20:15:48] - Log from pilotlog.txt -
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard info from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | found no stored workdir sizes
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | WARNING  | wrong length of table data, x=[1719079964.0], y=[1544.0] (must be same and length>=4)
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . Timing measurements:
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . get job = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . initial setup = 6 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload setup = 5 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . stage-in = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload execution = 16 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . stage-out = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . log creation = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241537706/pilotlog.txt
[2024-06-22 20:15:48] 2024-06-22 18:15:34,013 | WARNING  | 
[2024-06-22 20:15:48] [begin log extracts]
[2024-06-22 20:15:48] - Log from pilotlog.txt -
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard info from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,994 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | WARNING  | found no stored workdir sizes
[2024-06-22 20:15:48] 2024-06-22 18:15:33,995 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | WARNING  | wrong length of table data, x=[1719079964.0], y=[1544.0] (must be same and length>=4)
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . Timing measurements:
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . get job = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . initial setup = 6 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload setup = 5 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . stage-in = 0 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,996 | INFO     | . payload execution = 16 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . stage-out = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | . log creation = 10 s
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | ..............................
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:15:48] 2024-06-22 18:15:33,997 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot76/slots/1/PanDA_Pilot-6241537706/pilotlog.txt
[2024-06-22 20:15:48] [end log extracts]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,013 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 20:15:48] 2024-06-22 18:15:34,013 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:12:52,012 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 20:15:48] 2024-06-22 18:15:34,121 | INFO     | 
[2024-06-22 20:15:48] 2024-06-22 18:15:34,121 | INFO     | job summary report
[2024-06-22 20:15:48] 2024-06-22 18:15:34,121 | INFO     | --------------------------------------------------
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | PanDA job id: 6241537706
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | task id: 38921013
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:12:52,012 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | pilot state: failed 
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | transexitcode: 65
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | exeerrorcode: 65
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | exitcode: 65
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | cpuconsumptiontime: 20 s
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | nevents: 0
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | neventsw: 0
[2024-06-22 20:15:48] 2024-06-22 18:15:34,122 | INFO     | pid: 2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | pgrp: 2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | corecount: 4
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | event service: False
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | sizes: {0: 2387040, 4: 2387246, 11: 2387274, 44: 2391138, 56: 2414700, 58: 2414700, 179: 2414970}
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | --------------------------------------------------
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | 
[2024-06-22 20:15:48] 2024-06-22 18:15:34,123 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | job 6241537706 has completed (purged errors)
[2024-06-22 20:15:48] 2024-06-22 18:15:34,147 | INFO     | overall cleanup function is called
[2024-06-22 20:15:48] 2024-06-22 18:15:35,153 | INFO     | --- collectZombieJob: --- 10, [2560423]
[2024-06-22 20:15:48] 2024-06-22 18:15:35,153 | INFO     | zombie collector waiting for pid 2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:35,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 20:15:48] 2024-06-22 18:15:36,159 | INFO     | collected zombie processes
[2024-06-22 20:15:48] 2024-06-22 18:15:36,159 | INFO     | will now attempt to kill all subprocesses of pid=2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:36,311 | INFO     | process IDs to be killed: [2560423] (in reverse order)
[2024-06-22 20:15:48] 2024-06-22 18:15:36,438 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 20:15:48] 2024-06-22 18:15:36,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 20:15:48] 2024-06-22 18:15:36,448 | INFO     | did not find any defunct processes belonging to 2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:36,460 | INFO     | did not find any defunct processes belonging to 2560423
[2024-06-22 20:15:48] 2024-06-22 18:15:36,460 | INFO     | ready for new job
[2024-06-22 20:15:48] 2024-06-22 18:15:36,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 20:15:48] 2024-06-22 18:15:36,462 | INFO     | *************************************
[2024-06-22 20:15:48] 2024-06-22 18:15:36,462 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 20:15:48] 2024-06-22 18:15:36,462 | INFO     | *************************************
[2024-06-22 20:15:48] 2024-06-22 18:15:36,462 | INFO     | 
[2024-06-22 20:15:48] 2024-06-22 18:15:36,472 | INFO     | architecture information:
[2024-06-22 20:15:48] 2024-06-22 18:15:36,472 | INFO     | executing command: cat /etc/os-release
[2024-06-22 20:15:48] 2024-06-22 18:15:36,487 | INFO     | cat /etc/os-release:
[2024-06-22 20:15:48] NAME="CentOS Linux"
[2024-06-22 20:15:48] VERSION="7 (Core)"
[2024-06-22 20:15:48] ID="centos"
[2024-06-22 20:15:48] ID_LIKE="rhel fedora"
[2024-06-22 20:15:48] VERSION_ID="7"
[2024-06-22 20:15:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 20:15:48] ANSI_COLOR="0;31"
[2024-06-22 20:15:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 20:15:48] HOME_URL="https://www.centos.org/"
[2024-06-22 20:15:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 20:15:48] 
[2024-06-22 20:15:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 20:15:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 20:15:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 20:15:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 20:15:48] 
[2024-06-22 20:15:48] 2024-06-22 18:15:36,487 | INFO     | *************************************
[2024-06-22 20:15:48] 2024-06-22 18:15:36,991 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-06-22 20:15:48] 2024-06-22 18:15:37,008 | INFO     | sufficient remaining disk space (3170945204224 B)
[2024-06-22 20:15:48] 2024-06-22 18:15:37,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 20:15:48] 2024-06-22 18:15:37,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 20:15:48] 2024-06-22 18:15:37,009 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 20:15:48] 2024-06-22 18:15:37,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 20:15:48] 2024-06-22 18:15:37,009 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 20:15:48] 2024-06-22 18:15:37,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 20:15:48] 2024-06-22 18:15:37,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 20:15:48] 2024-06-22 18:15:37,677 | INFO     | all payload control threads have been joined
[2024-06-22 20:15:48] 2024-06-22 18:15:37,693 | INFO     | all data control threads have been joined
[2024-06-22 20:15:48] 2024-06-22 18:15:37,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:15:48] 2024-06-22 18:15:37,791 | INFO     | aborting loop
[2024-06-22 20:15:48] 2024-06-22 18:15:38,014 | INFO     | [job] retrieve thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 20:15:48] 2024-06-22 18:15:38,465 | INFO     | [payload] failed_post thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,466 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,632 | INFO     | [payload] validate_post thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,651 | INFO     | all job control threads have been joined
[2024-06-22 20:15:48] 2024-06-22 18:15:38,683 | INFO     | [payload] control thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,699 | INFO     | [data] control thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:38,796 | INFO     | [job] job monitor thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,079 | INFO     | [data] copytool_in thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,085 | INFO     | [job] validate thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:15:48] 2024-06-22 18:15:39,247 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,383 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,441 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:39,656 | INFO     | [job] control thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:40,138 | INFO     | [job] queue monitor thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:40,275 | INFO     | [data] copytool_out thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:41,015 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 20:15:48] 2024-06-22 18:15:42,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47593508463680)>', '<ExcThread(monitor, started 47593714603776)>']
[2024-06-22 20:15:48] 2024-06-22 18:15:43,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 20:15:48] 2024-06-22 18:15:43,036 | INFO     | [monitor] control thread has ended
[2024-06-22 20:15:48] 2024-06-22 18:15:47,239 | INFO     | all workflow threads have been joined
[2024-06-22 20:15:48] 2024-06-22 18:15:47,239 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 20:15:48] 2024-06-22 18:15:47,239 | INFO     | traces error code: 0
[2024-06-22 20:15:48] 2024-06-22 18:15:47,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 20:15:48] 2024-06-22 18:15:47,307 [wrapper] ==== pilot stdout END ====
[2024-06-22 20:15:48] 2024-06-22 18:15:47,310 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 20:15:48] 2024-06-22 18:15:47,311 [wrapper] pilotpid: 2550612
[2024-06-22 20:15:48] 2024-06-22 18:15:47,313 [wrapper] Pilot exit status: 0
[2024-06-22 20:15:48] 2024-06-22 18:15:47,318 [wrapper] pandaids: 6241537706
[2024-06-22 20:15:48] 2024-06-22 18:15:47,379 [wrapper] cleanup supervisor_pilot 2550617 2550613
[2024-06-22 20:15:48] 2024-06-22 18:15:47,381 [wrapper] Test setup, not cleaning
[2024-06-22 20:15:48] 2024-06-22 18:15:47,383 [wrapper] ==== wrapper stdout END ====
[2024-06-22 20:15:48] 2024-06-22 18:15:47,385 [wrapper] ==== wrapper stderr END ====
[2024-06-22 20:15:48] 2024-06-22 18:15:47,389 [wrapper] apfmon messages muted
[2024-06-22 20:15:48]  *** Error codes and diagnostics ***
[2024-06-22 20:15:48]     "exeErrorCode": 65,
[2024-06-22 20:15:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 20:15:48]     "pilotErrorCode": 1305,
[2024-06-22 20:15:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:12:52,012 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 20:15:48]  *** Listing of results directory ***
[2024-06-22 20:15:48] total 530216
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc    469766 Jun 22 17:59 pilot3.tar.gz
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc      5654 Jun 22 18:11 queuedata.json
[2024-06-22 20:15:48] -rwx------ 1 boinc boinc     32308 Jun 22 18:12 runpilot2-wrapper.sh
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc       100 Jun 22 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 20:15:48] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 19:56 run_atlas
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc       105 Jun 22 19:56 job.xml
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc    482528 Jun 22 20:12 input.tar.gz
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc      6642 Jun 22 20:12 init_data.xml
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc 540231114 Jun 22 20:12 EVNT.38776210._000426.pool.root.1
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:12 start_atlas.sh
[2024-06-22 20:15:48] drwxrwx--x 2 boinc boinc      4096 Jun 22 20:12 shared
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc         0 Jun 22 20:12 boinc_lockfile
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc      2645 Jun 22 20:12 pandaJob.out
[2024-06-22 20:15:48] -rw------- 1 boinc boinc       424 Jun 22 20:12 setup.sh.local
[2024-06-22 20:15:48] -rw------- 1 boinc boinc         0 Jun 22 20:12 agis_schedconf.cvmfs.json
[2024-06-22 20:15:48] -rw------- 1 boinc boinc         0 Jun 22 20:12 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-22 20:15:48] -rw------- 1 boinc boinc         0 Jun 22 20:12 agis_ddmendpoints.agis.ALL.json
[2024-06-22 20:15:48] -rw------- 1 boinc boinc   1321363 Jun 22 20:12 cric_ddmendpoints.json
[2024-06-22 20:15:48] drwx------ 4 boinc boinc      4096 Jun 22 20:12 pilot3
[2024-06-22 20:15:48] -rw------- 1 boinc boinc       941 Jun 22 20:12 memory_monitor_summary.json
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc       523 Jun 22 20:12 boinc_task_state.xml
[2024-06-22 20:15:48] -rw------- 1 boinc boinc     20003 Jun 22 20:13 log.38921013._053723.job.log.tgz.1
[2024-06-22 20:15:48] -rw------- 1 boinc boinc        95 Jun 22 20:15 pilot_heartbeat.json
[2024-06-22 20:15:48] -rw------- 1 boinc boinc      8325 Jun 22 20:15 heartbeat.json
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc        22 Jun 22 20:15 wrapper_checkpoint.txt
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc      8192 Jun 22 20:15 boinc_mmap_file
[2024-06-22 20:15:48] -rw------- 1 boinc boinc      4345 Jun 22 20:15 pilotlog.txt
[2024-06-22 20:15:48] -rw------- 1 boinc boinc     78178 Jun 22 20:15 log.38921013._053723.job.log.1
[2024-06-22 20:15:48] -rw------- 1 boinc boinc       188 Jun 22 20:15 output.list
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc       620 Jun 22 20:15 runtime_log
[2024-06-22 20:15:48] -rw------- 1 boinc boinc    122880 Jun 22 20:15 result.tar.gz
[2024-06-22 20:15:48] -rw------- 1 boinc boinc       635 Jun 22 20:15 zDRMDm1WIf5n7Olcko1bjSoqABFKDmABFKDmOtvXDm5frKDm19cWNn.diag
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc     11256 Jun 22 20:15 runtime_log.err
[2024-06-22 20:15:48] -rw-r--r-- 1 boinc boinc     21400 Jun 22 20:15 stderr.txt
[2024-06-22 20:15:48] No HITS result produced
[2024-06-22 20:15:48]  *** Contents of shared directory: ***
[2024-06-22 20:15:48] total 528188
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc    482528 Jun 22 20:12 input.tar.gz
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc 540231114 Jun 22 20:12 ATLAS.root_0
[2024-06-22 20:15:48] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:12 start_atlas.sh
[2024-06-22 20:15:48] -rw------- 1 boinc boinc    122880 Jun 22 20:15 result.tar.gz
20:15:49 (2546017): run_atlas exited; CPU time 20.231833
20:15:49 (2546017): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN