Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
04:12:20 (167868): wrapper (7.7.26015): starting
04:12:20 (167868): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 04:12:20] Arguments: --nthreads 12
[2024-06-23 04:12:20] Threads: 12
[2024-06-23 04:12:20] Checking for CVMFS
[2024-06-23 04:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 04:12:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 04:12:20] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 04:12:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 04:12:20] 2.10.1.0 2057 234226 162820 134200 2 101 32837852 45568001 8893 130560 0 1359163322 99.768 835417412 19725 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-23 04:12:20] CVMFS is ok
[2024-06-23 04:12:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 04:12:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 04:12:20] Further information can be found at the LHC@home message board.
[2024-06-23 04:12:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 04:12:20] Checking for apptainer binary...
[2024-06-23 04:12:20] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 04:12:20] Running /usr/bin/apptainer --version
[2024-06-23 04:12:21] apptainer version 1.3.2-1.el7
[2024-06-23 04:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 04:12:22] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0043.triumf.lcg
[2024-06-23 04:12:22] apptainer works
[2024-06-23 04:12:22] Set ATHENA_PROC_NUMBER=12
[2024-06-23 04:12:22] Set ATHENA_CORE_NUMBER=12
[2024-06-23 04:12:22] Starting ATLAS job with PandaID=6241529327
[2024-06-23 04:12:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 11:05:46]  *** The last 200 lines of the pilot log: ***
[2024-06-23 11:05:46] 2024-06-23 18:05:24,011 | INFO     | current chi2=5.803722660915274 (change=-0.021103782215103825 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,011 | INFO     | right removable region: 400
[2024-06-23 11:05:46] 2024-06-23 18:05:24,011 | INFO     | model: linear, x: [1719141477.0, 1719141538.0, 1719141599.0, 1719141660.0, 1719141721.0, 1719141782.0, 1719141843.0, 1719141904.0, 1719141965.0, 1719142026.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,011 | INFO     | sum of square deviations: 19996807480.563656
[2024-06-23 11:05:46] 2024-06-23 18:05:24,014 | INFO     | sum of deviations: 207518220660.20715
[2024-06-23 11:05:46] 2024-06-23 18:05:24,014 | INFO     | mean x: 1719153679.9401495
[2024-06-23 11:05:46] 2024-06-23 18:05:24,014 | INFO     | mean y: 2751949.216957606
[2024-06-23 11:05:46] 2024-06-23 18:05:24,014 | INFO     | -- intersect: -17837881514.368855
[2024-06-23 11:05:46] 2024-06-23 18:05:24,014 | INFO     | intersect: -17837881514.368855
[2024-06-23 11:05:46] 2024-06-23 18:05:24,015 | INFO     | chi2: 3.130427546631495
[2024-06-23 11:05:46] 2024-06-23 18:05:24,015 | INFO     | current chi2=3.130427546631495 (change=46.050347885687046 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,015 | INFO     | model: linear, x: [1719141782.0, 1719141843.0, 1719141904.0, 1719141965.0, 1719142026.0, 1719142087.0, 1719142148.0, 1719142209.0, 1719142270.0, 1719142331.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,015 | INFO     | sum of square deviations: 19257810736.79541
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | sum of deviations: 102684228191.81827
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | mean x: 1719153832.4772727
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | mean y: 2773594.97979798
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | -- intersect: -9163895807.043343
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | intersect: -9163895807.043343
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | chi2: 1.1382855561951053
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | current chi2=1.1382855561951053 (change=63.63801623775127 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,018 | INFO     | model: linear, x: [1719142087.0, 1719142148.0, 1719142209.0, 1719142270.0, 1719142331.0, 1719142395.0, 1719142453.0, 1719142514.0, 1719142575.0, 1719142636.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,019 | INFO     | sum of square deviations: 18537232941.90787
[2024-06-23 11:05:46] 2024-06-23 18:05:24,021 | INFO     | sum of deviations: 33649690923.158573
[2024-06-23 11:05:46] 2024-06-23 18:05:24,021 | INFO     | mean x: 1719153985.0153453
[2024-06-23 11:05:46] 2024-06-23 18:05:24,021 | INFO     | mean y: 2788163.3069053707
[2024-06-23 11:05:46] 2024-06-23 18:05:24,021 | INFO     | -- intersect: -3117904144.243548
[2024-06-23 11:05:46] 2024-06-23 18:05:24,021 | INFO     | intersect: -3117904144.243548
[2024-06-23 11:05:46] 2024-06-23 18:05:24,022 | INFO     | chi2: 0.11093143440726796
[2024-06-23 11:05:46] 2024-06-23 18:05:24,022 | INFO     | current chi2=0.11093143440726796 (change=90.25451620610268 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,022 | INFO     | model: linear, x: [1719142395.0, 1719142453.0, 1719142514.0, 1719142575.0, 1719142636.0, 1719142697.0, 1719142758.0, 1719142819.0, 1719142880.0, 1719142941.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,022 | INFO     | sum of square deviations: 17834841533.357403
[2024-06-23 11:05:46] 2024-06-23 18:05:24,024 | INFO     | sum of deviations: 16328711373.585493
[2024-06-23 11:05:46] 2024-06-23 18:05:24,024 | INFO     | mean x: 1719154137.5544043
[2024-06-23 11:05:46] 2024-06-23 18:05:24,024 | INFO     | mean y: 2791905.567357513
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | -- intersect: -1571181805.7396638
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | intersect: -1571181805.7396638
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | chi2: 0.025746080831131845
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | current chi2=0.025746080831131845 (change=76.79099619625488 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | model: linear, x: [1719142697.0, 1719142758.0, 1719142819.0, 1719142880.0, 1719142941.0, 1719143002.0, 1719143063.0, 1719143124.0, 1719143185.0, 1719143246.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,025 | INFO     | sum of square deviations: 17150475328.141678
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | sum of deviations: 14629982466.74015
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | mean x: 1719154290.0866141
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | mean y: 2792282.341207349
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | -- intersect: -1463709178.4269655
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | intersect: -1463709178.4269655
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | chi2: 0.025257269727752305
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | current chi2=0.025257269727752305 (change=1.8985845130590726 %)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,028 | INFO     | left removable region: 50
[2024-06-23 11:05:46] 2024-06-23 18:05:24,029 | INFO     | model: linear, x: [1719144224.0, 1719144292.0, 1719144347.0, 1719144405.0, 1719144472.0, 1719144530.0, 1719144597.0, 1719144651.0, 1719144719.0, 1719144776.0, 1719
[2024-06-23 11:05:46] 2024-06-23 18:05:24,029 | INFO     | sum of square deviations: 13295179612.868505
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | sum of deviations: 25299078055.78283
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | mean x: 1719154869.7542858
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | mean y: 2789064.8114285716
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | -- intersect: -3268549458.3474164
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | intersect: -3268549458.3474164
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | chi2: 0.014095791129867722
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | -- intersect: -3268549458.3474164
[2024-06-23 11:05:46] 2024-06-23 18:05:24,031 | INFO     | current memory leak: 1.90 B/s (using 350 data points, chi2=0.01)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | ..............................
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . Timing measurements:
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . get job = 0 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . initial setup = 2 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . payload setup = 4 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . stage-in = 0 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . payload execution = 24746 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . stage-out = 1 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | . log creation = 0 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,032 | INFO     | ..............................
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | 
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | job summary report
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | --------------------------------------------------
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | PanDA job id: 6241529327
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | task id: 38920995
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | errors: (none)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 11:05:46] 2024-06-23 18:05:24,263 | INFO     | pilot state: finished 
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | transexitcode: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | exeerrorcode: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | exeerrordiag: 
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | exitcode: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | exitmsg: OK
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | cpuconsumptiontime: 77336 s
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | nevents: 400
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | neventsw: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | pid: 178465
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | pgrp: 178465
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | corecount: 12
[2024-06-23 11:05:46] 2024-06-23 18:05:24,264 | INFO     | event service: False
[2024-06-23 11:05:46] 2024-06-23 18:05:24,265 | INFO     | sizes: {0: 2386870, 1: 2387069, 4: 2387275, 11: 2387303, 24754: 2421691, 24756: 2430829, 24759: 2430943}
[2024-06-23 11:05:46] 2024-06-23 18:05:24,265 | INFO     | --------------------------------------------------
[2024-06-23 11:05:46] 2024-06-23 18:05:24,265 | INFO     | 
[2024-06-23 11:05:46] 2024-06-23 18:05:24,265 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,290 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 11:05:46] 2024-06-23 18:05:24,290 | INFO     | job 6241529327 has completed (purged errors)
[2024-06-23 11:05:46] 2024-06-23 18:05:24,290 | INFO     | overall cleanup function is called
[2024-06-23 11:05:46] 2024-06-23 18:05:25,300 | INFO     | --- collectZombieJob: --- 10, [178465]
[2024-06-23 11:05:46] 2024-06-23 18:05:25,300 | INFO     | zombie collector waiting for pid 178465
[2024-06-23 11:05:46] 2024-06-23 18:05:25,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 11:05:46] 2024-06-23 18:05:26,305 | INFO     | collected zombie processes
[2024-06-23 11:05:46] 2024-06-23 18:05:26,306 | INFO     | will now attempt to kill all subprocesses of pid=178465
[2024-06-23 11:05:46] 2024-06-23 18:05:26,457 | INFO     | process IDs to be killed: [178465] (in reverse order)
[2024-06-23 11:05:46] 2024-06-23 18:05:26,562 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 11:05:46] 2024-06-23 18:05:26,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 11:05:46] 2024-06-23 18:05:26,570 | INFO     | did not find any defunct processes belonging to 178465
[2024-06-23 11:05:46] 2024-06-23 18:05:26,576 | INFO     | did not find any defunct processes belonging to 178465
[2024-06-23 11:05:46] 2024-06-23 18:05:26,577 | INFO     | ready for new job
[2024-06-23 11:05:46] 2024-06-23 18:05:26,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 11:05:46] 2024-06-23 18:05:26,581 | INFO     | *************************************
[2024-06-23 11:05:46] 2024-06-23 18:05:26,581 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 11:05:46] 2024-06-23 18:05:26,581 | INFO     | *************************************
[2024-06-23 11:05:46] 2024-06-23 18:05:26,581 | INFO     | 
[2024-06-23 11:05:46] 2024-06-23 18:05:26,585 | INFO     | architecture information:
[2024-06-23 11:05:46] 2024-06-23 18:05:26,586 | INFO     | executing command: cat /etc/os-release
[2024-06-23 11:05:46] 2024-06-23 18:05:26,606 | INFO     | cat /etc/os-release:
[2024-06-23 11:05:46] NAME="CentOS Linux"
[2024-06-23 11:05:46] VERSION="7 (Core)"
[2024-06-23 11:05:46] ID="centos"
[2024-06-23 11:05:46] ID_LIKE="rhel fedora"
[2024-06-23 11:05:46] VERSION_ID="7"
[2024-06-23 11:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 11:05:46] ANSI_COLOR="0;31"
[2024-06-23 11:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 11:05:46] HOME_URL="https://www.centos.org/"
[2024-06-23 11:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 11:05:46] 
[2024-06-23 11:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 11:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 11:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 11:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 11:05:46] 
[2024-06-23 11:05:46] 2024-06-23 18:05:26,606 | INFO     | *************************************
[2024-06-23 11:05:46] 2024-06-23 18:05:27,109 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-23 11:05:46] 2024-06-23 18:05:27,130 | INFO     | sufficient remaining disk space (2016952713216 B)
[2024-06-23 11:05:46] 2024-06-23 18:05:27,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 11:05:46] 2024-06-23 18:05:27,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 11:05:46] 2024-06-23 18:05:27,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 11:05:46] 2024-06-23 18:05:27,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 11:05:46] 2024-06-23 18:05:27,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 11:05:46] 2024-06-23 18:05:27,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 11:05:46] 2024-06-23 18:05:27,133 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 11:05:46] 2024-06-23 18:05:27,133 | INFO     | aborting loop
[2024-06-23 11:05:46] 2024-06-23 18:05:27,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 11:05:46] 2024-06-23 18:05:27,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 11:05:46] 2024-06-23 18:05:27,717 | INFO     | all data control threads have been joined
[2024-06-23 11:05:46] 2024-06-23 18:05:27,822 | INFO     | all payload control threads have been joined
[2024-06-23 11:05:46] 2024-06-23 18:05:28,136 | INFO     | [job] retrieve thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,139 | INFO     | [job] job monitor thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,285 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,286 | INFO     | [data] copytool_in thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,302 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,627 | INFO     | all job control threads have been joined
[2024-06-23 11:05:46] 2024-06-23 18:05:28,723 | INFO     | [data] control thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,792 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,797 | INFO     | [payload] failed_post thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:28,828 | INFO     | [payload] control thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:29,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 11:05:46] 2024-06-23 18:05:29,138 | INFO     | [data] copytool_out thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:29,430 | INFO     | [payload] validate_post thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:29,589 | INFO     | [job] validate thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:29,632 | INFO     | [job] control thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:30,101 | INFO     | [job] queue monitor thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:31,139 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:37,521 | INFO     | job.realtimelogging is not enabled
[2024-06-23 11:05:46] 2024-06-23 18:05:38,524 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 11:05:46] 2024-06-23 18:05:39,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096911836992)>', '<ExcThread(monitor, started 140096615454464)>']
[2024-06-23 11:05:46] 2024-06-23 18:05:40,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 11:05:46] 2024-06-23 18:05:40,189 | INFO     | [monitor] control thread has ended
[2024-06-23 11:05:46] 2024-06-23 18:05:44,900 | INFO     | all workflow threads have been joined
[2024-06-23 11:05:46] 2024-06-23 18:05:44,901 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 11:05:46] 2024-06-23 18:05:44,901 | INFO     | traces error code: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:44,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 11:05:46] 2024-06-23 18:05:45,062 [wrapper] ==== pilot stdout END ====
[2024-06-23 11:05:46] 2024-06-23 18:05:45,064 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 11:05:46] 2024-06-23 18:05:45,066 [wrapper] pilotpid: 172028
[2024-06-23 11:05:46] 2024-06-23 18:05:45,067 [wrapper] Pilot exit status: 0
[2024-06-23 11:05:46] 2024-06-23 18:05:45,076 [wrapper] pandaids: 6241529327
[2024-06-23 11:05:46] 2024-06-23 18:05:45,119 [wrapper] cleanup supervisor_pilot 189897 172029
[2024-06-23 11:05:46] 2024-06-23 18:05:45,121 [wrapper] Test setup, not cleaning
[2024-06-23 11:05:46] 2024-06-23 18:05:45,122 [wrapper] ==== wrapper stdout END ====
[2024-06-23 11:05:46] 2024-06-23 18:05:45,124 [wrapper] ==== wrapper stderr END ====
[2024-06-23 11:05:46] 2024-06-23 18:05:45,128 [wrapper] apfmon messages muted
[2024-06-23 11:05:46]  *** Error codes and diagnostics ***
[2024-06-23 11:05:46]     "exeErrorCode": 0,
[2024-06-23 11:05:46]     "exeErrorDiag": "",
[2024-06-23 11:05:46]     "pilotErrorCode": 0,
[2024-06-23 11:05:46]     "pilotErrorDiag": "",
[2024-06-23 11:05:46]  *** Listing of results directory ***
[2024-06-23 11:05:46] total 978812
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc      5654 Jun 22 08:58 queuedata.json
[2024-06-23 11:05:46] -rwx------ 1 boinc boinc     32308 Jun 22 08:59 runpilot2-wrapper.sh
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc    469766 Jun 22 08:59 pilot3.tar.gz
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc       100 Jun 23 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 11:05:46] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 04:12 run_atlas
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc       105 Jun 23 04:12 job.xml
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc      6629 Jun 23 04:12 init_data.xml
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc 631110437 Jun 23 04:12 EVNT.38776180._000898.pool.root.1
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc    482523 Jun 23 04:12 input.tar.gz
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc     17537 Jun 23 04:12 start_atlas.sh
[2024-06-23 11:05:46] drwxrwx--x 2 boinc boinc      4096 Jun 23 04:12 shared
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc         0 Jun 23 04:12 boinc_lockfile
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc      2616 Jun 23 04:12 pandaJob.out
[2024-06-23 11:05:46] -rw------- 1 boinc boinc       424 Jun 23 04:12 setup.sh.local
[2024-06-23 11:05:46] -rw------- 1 boinc boinc   1025304 Jun 23 04:12 agis_schedconf.cvmfs.json
[2024-06-23 11:05:46] -rw------- 1 boinc boinc   1321363 Jun 23 04:12 cric_ddmendpoints.json
[2024-06-23 11:05:46] drwx------ 4 boinc boinc      4096 Jun 23 04:12 pilot3
[2024-06-23 11:05:46] -rw------- 1 boinc boinc 362248583 Jun 23 11:04 HITS.38920995._058021.pool.root.1
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc       532 Jun 23 11:04 boinc_task_state.xml
[2024-06-23 11:05:46] -rw------- 1 boinc boinc        95 Jun 23 11:05 pilot_heartbeat.json
[2024-06-23 11:05:46] -rw------- 1 boinc boinc      1066 Jun 23 11:05 memory_monitor_summary.json
[2024-06-23 11:05:46] -rw------- 1 boinc boinc         0 Jun 23 11:05 agis_ddmendpoints.agis.ALL.json
[2024-06-23 11:05:46] -rw------- 1 boinc boinc    536237 Jun 23 11:05 log.38920995._058021.job.log.tgz.1
[2024-06-23 11:05:46] -rw------- 1 boinc boinc      7782 Jun 23 11:05 heartbeat.json
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc      8192 Jun 23 11:05 boinc_mmap_file
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc        28 Jun 23 11:05 wrapper_checkpoint.txt
[2024-06-23 11:05:46] -rw------- 1 boinc boinc      4405 Jun 23 11:05 pilotlog.txt
[2024-06-23 11:05:46] -rw------- 1 boinc boinc   2170538 Jun 23 11:05 log.38920995._058021.job.log.1
[2024-06-23 11:05:46] -rw------- 1 boinc boinc       357 Jun 23 11:05 output.list
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc       620 Jun 23 11:05 runtime_log
[2024-06-23 11:05:46] -rw------- 1 boinc boinc   2723840 Jun 23 11:05 result.tar.gz
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc     11287 Jun 23 11:05 runtime_log.err
[2024-06-23 11:05:46] -rw------- 1 boinc boinc       659 Jun 23 11:05 ilTMDmUKIf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmnlnKDmJaEkZm.diag
[2024-06-23 11:05:46] -rw-r--r-- 1 boinc boinc     21994 Jun 23 11:05 stderr.txt
[2024-06-23 11:05:46] HITS file was successfully produced:
[2024-06-23 11:05:46] -rw------- 1 boinc boinc 362248583 Jun 23 11:04 shared/HITS.pool.root.1
[2024-06-23 11:05:46]  *** Contents of shared directory: ***
[2024-06-23 11:05:46] total 973240
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc 631110437 Jun 23 04:12 ATLAS.root_0
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc    482523 Jun 23 04:12 input.tar.gz
[2024-06-23 11:05:46] -rw-r--r-- 2 boinc boinc     17537 Jun 23 04:12 start_atlas.sh
[2024-06-23 11:05:46] -rw------- 1 boinc boinc 362248583 Jun 23 11:04 HITS.pool.root.1
[2024-06-23 11:05:46] -rw------- 1 boinc boinc   2723840 Jun 23 11:05 result.tar.gz
11:05:48 (167868): run_atlas exited; CPU time 76905.164531
11:05:48 (167868): called boinc_finish(0)

</stderr_txt>
]]>

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