Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:08 (2652961): wrapper (7.7.26015): starting
23:14:08 (2652961): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 23:14:08] Arguments: --nthreads 4
[2024-06-22 23:14:08] Threads: 4
[2024-06-22 23:14:08] Checking for CVMFS
[2024-06-22 23:14:08] No cvmfs_config command found, will try listing directly
[2024-06-22 23:14:08] CVMFS is ok
[2024-06-22 23:14:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 23:14:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 23:14:08] Further information can be found at the LHC@home message board.
[2024-06-22 23:14:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 23:14:08] Checking for apptainer binary...
[2024-06-22 23:14:08] which: no apptainer in ((null))
[2024-06-22 23:14:08] apptainer is not installed, using version from CVMFS
[2024-06-22 23:14:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 23:14:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 23:14:09] apptainer works
[2024-06-22 23:14:09] Set ATHENA_PROC_NUMBER=4
[2024-06-22 23:14:09] Set ATHENA_CORE_NUMBER=4
[2024-06-22 23:14:09] Starting ATLAS job with PandaID=6241517258
[2024-06-22 23:14:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 23:15:22]  *** The last 200 lines of the pilot log: ***
[2024-06-22 23:15:22] 2024-06-22 21:15:08,332 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6241517258/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard info from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | GPU info not found in prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | found no stored workdir sizes
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | WARNING  | wrong length of table data, x=[1719090883.0], y=[2301.0] (must be same and length>=4)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . Timing measurements:
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . get job = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . initial setup = 1 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . payload setup = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-in = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . payload execution = 16 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-out = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . log creation = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6241517258/pilotlog.txt
[2024-06-22 23:15:22] 2024-06-22 21:15:08,352 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 23:15:22] - Log from pilotlog.txt -
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard info from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | GPU info not found in prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | found no stored workdir sizes
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | WARNING  | wrong length of table data, x=[1719090883.0], y=[2301.0] (must be same and length>=4)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . Timing measurements:
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . get job = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . initial setup = 1 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . payload setup = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-in = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . payload execution = 16 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-out = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . log creation = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6241517258/pilotlog.txt
[2024-06-22 23:15:22] 2024-06-22 21:15:08,352 | WARNING  | 
[2024-06-22 23:15:22] [begin log extracts]
[2024-06-22 23:15:22] - Log from pilotlog.txt -
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard info from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | GPU info not found in prmon json
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | WARNING  | found no stored workdir sizes
[2024-06-22 23:15:22] 2024-06-22 21:15:08,334 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | WARNING  | wrong length of table data, x=[1719090883.0], y=[2301.0] (must be same and length>=4)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . Timing measurements:
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . get job = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . initial setup = 1 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,335 | INFO     | . payload setup = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-in = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . payload execution = 16 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . stage-out = 5 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | . log creation = 0 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | ..............................
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 23:15:22] 2024-06-22 21:15:08,336 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6241517258/pilotlog.txt
[2024-06-22 23:15:22] [end log extracts]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,353 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,353 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 23:14:51,092 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 23:15:22] 2024-06-22 21:15:08,476 | INFO     | 
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | job summary report
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | --------------------------------------------------
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | PanDA job id: 6241517258
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | task id: 38921007
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 23:14:51,092 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | pilot state: failed 
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | transexitcode: 65
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | exeerrorcode: 65
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | exitcode: 65
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | cpuconsumptiontime: 21 s
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | nevents: 0
[2024-06-22 23:15:22] 2024-06-22 21:15:08,477 | INFO     | neventsw: 0
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | pid: 2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | pgrp: 2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | corecount: 4
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | event service: False
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | sizes: {0: 2386949, 1: 2387034, 5: 2387354, 11: 2387410, 25: 2410484, 26: 2414720, 28: 2414876, 30: 2414904, 31: 2414932, 32: 2414904, 35: 2415102}
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | --------------------------------------------------
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | 
[2024-06-22 23:15:22] 2024-06-22 21:15:08,478 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-06-22 23:15:22] 2024-06-22 21:15:08,499 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,499 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 23:15:22] 2024-06-22 21:15:08,501 | INFO     | job 6241517258 has completed (purged errors)
[2024-06-22 23:15:22] 2024-06-22 21:15:08,502 | INFO     | overall cleanup function is called
[2024-06-22 23:15:22] 2024-06-22 21:15:09,508 | INFO     | --- collectZombieJob: --- 10, [2676107]
[2024-06-22 23:15:22] 2024-06-22 21:15:09,508 | INFO     | zombie collector waiting for pid 2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:09,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 23:15:22] 2024-06-22 21:15:10,513 | INFO     | collected zombie processes
[2024-06-22 23:15:22] 2024-06-22 21:15:10,513 | INFO     | will now attempt to kill all subprocesses of pid=2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:10,685 | INFO     | process IDs to be killed: [2676107] (in reverse order)
[2024-06-22 23:15:22] 2024-06-22 21:15:10,814 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 23:15:22] 2024-06-22 21:15:10,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 23:15:22] 2024-06-22 21:15:10,822 | INFO     | did not find any defunct processes belonging to 2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:10,826 | INFO     | did not find any defunct processes belonging to 2676107
[2024-06-22 23:15:22] 2024-06-22 21:15:10,827 | INFO     | ready for new job
[2024-06-22 23:15:22] 2024-06-22 21:15:10,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 23:15:22] 2024-06-22 21:15:10,827 | INFO     | *************************************
[2024-06-22 23:15:22] 2024-06-22 21:15:10,828 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 23:15:22] 2024-06-22 21:15:10,828 | INFO     | *************************************
[2024-06-22 23:15:22] 2024-06-22 21:15:10,828 | INFO     | 
[2024-06-22 23:15:22] 2024-06-22 21:15:10,832 | INFO     | architecture information:
[2024-06-22 23:15:22] 2024-06-22 21:15:10,832 | INFO     | executing command: cat /etc/os-release
[2024-06-22 23:15:22] 2024-06-22 21:15:10,846 | INFO     | cat /etc/os-release:
[2024-06-22 23:15:22] NAME="CentOS Linux"
[2024-06-22 23:15:22] VERSION="7 (Core)"
[2024-06-22 23:15:22] ID="centos"
[2024-06-22 23:15:22] ID_LIKE="rhel fedora"
[2024-06-22 23:15:22] VERSION_ID="7"
[2024-06-22 23:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 23:15:22] ANSI_COLOR="0;31"
[2024-06-22 23:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 23:15:22] HOME_URL="https://www.centos.org/"
[2024-06-22 23:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 23:15:22] 
[2024-06-22 23:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 23:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 23:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 23:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 23:15:22] 
[2024-06-22 23:15:22] 2024-06-22 21:15:10,846 | INFO     | *************************************
[2024-06-22 23:15:22] 2024-06-22 21:15:11,349 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-06-22 23:15:22] 2024-06-22 21:15:11,368 | INFO     | sufficient remaining disk space (3215997272064 B)
[2024-06-22 23:15:22] 2024-06-22 21:15:11,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 23:15:22] 2024-06-22 21:15:11,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 23:15:22] 2024-06-22 21:15:11,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 23:15:22] 2024-06-22 21:15:11,369 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 23:15:22] 2024-06-22 21:15:11,370 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 23:15:22] 2024-06-22 21:15:11,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 23:15:22] 2024-06-22 21:15:11,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 23:15:22] 2024-06-22 21:15:11,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 23:15:22] 2024-06-22 21:15:11,965 | INFO     | aborting loop
[2024-06-22 23:15:22] 2024-06-22 21:15:12,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 23:15:22] 2024-06-22 21:15:12,339 | INFO     | all data control threads have been joined
[2024-06-22 23:15:22] 2024-06-22 21:15:12,374 | INFO     | [job] retrieve thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,380 | INFO     | [data] copytool_in thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,451 | INFO     | all payload control threads have been joined
[2024-06-22 23:15:22] 2024-06-22 21:15:12,489 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,591 | INFO     | [job] validate thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,682 | INFO     | [payload] failed_post thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,753 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,851 | INFO     | all job control threads have been joined
[2024-06-22 23:15:22] 2024-06-22 21:15:12,915 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:12,970 | INFO     | [job] job monitor thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:13,231 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:13,340 | INFO     | [data] control thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:13,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 23:15:22] 2024-06-22 21:15:13,457 | INFO     | [payload] control thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:13,690 | INFO     | [payload] validate_post thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:13,856 | INFO     | [job] control thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:14,156 | INFO     | [data] copytool_out thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:14,451 | INFO     | [job] queue monitor thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:15,375 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 23:15:22] 2024-06-22 21:15:16,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47989385929792)>', '<ExcThread(monitor, started 47989583664896)>']
[2024-06-22 23:15:22] 2024-06-22 21:15:17,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 23:15:22] 2024-06-22 21:15:17,401 | INFO     | [monitor] control thread has ended
[2024-06-22 23:15:22] 2024-06-22 21:15:21,937 | INFO     | all workflow threads have been joined
[2024-06-22 23:15:22] 2024-06-22 21:15:21,937 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 23:15:22] 2024-06-22 21:15:21,938 | INFO     | traces error code: 0
[2024-06-22 23:15:22] 2024-06-22 21:15:21,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 23:15:22] 2024-06-22 21:15:22,041 [wrapper] ==== pilot stdout END ====
[2024-06-22 23:15:22] 2024-06-22 21:15:22,043 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 23:15:22] 2024-06-22 21:15:22,045 [wrapper] pilotpid: 2663955
[2024-06-22 23:15:22] 2024-06-22 21:15:22,048 [wrapper] Pilot exit status: 0
[2024-06-22 23:15:22] 2024-06-22 21:15:22,055 [wrapper] pandaids: 6241517258
[2024-06-22 23:15:22] 2024-06-22 21:15:22,153 [wrapper] cleanup supervisor_pilot 2663960 2663956
[2024-06-22 23:15:22] 2024-06-22 21:15:22,155 [wrapper] Test setup, not cleaning
[2024-06-22 23:15:22] 2024-06-22 21:15:22,158 [wrapper] ==== wrapper stdout END ====
[2024-06-22 23:15:22] 2024-06-22 21:15:22,160 [wrapper] ==== wrapper stderr END ====
[2024-06-22 23:15:22] 2024-06-22 21:15:22,164 [wrapper] apfmon messages muted
[2024-06-22 23:15:22]  *** Error codes and diagnostics ***
[2024-06-22 23:15:22]     "exeErrorCode": 65,
[2024-06-22 23:15:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 23:15:22]     "pilotErrorCode": 1305,
[2024-06-22 23:15:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 23:14:51,092 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 23:15:22]  *** Listing of results directory ***
[2024-06-22 23:15:22] total 572388
[2024-06-22 23:15:22] -rwx------ 1 boinc boinc     32308 Jun 22 17:35 runpilot2-wrapper.sh
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc    469766 Jun 22 17:35 pilot3.tar.gz
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc      5654 Jun 22 17:35 queuedata.json
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc       100 Jun 22 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 23:15:22] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 22:31 run_atlas
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc       105 Jun 22 22:31 job.xml
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc 582421364 Jun 22 23:14 EVNT.38776201._000971.pool.root.1
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc     17537 Jun 22 23:14 start_atlas.sh
[2024-06-22 23:15:22] drwxrwx--x 2 boinc boinc      4096 Jun 22 23:14 shared
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc    482523 Jun 22 23:14 input.tar.gz
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc      6642 Jun 22 23:14 init_data.xml
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc         0 Jun 22 23:14 boinc_lockfile
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc      2631 Jun 22 23:14 pandaJob.out
[2024-06-22 23:15:22] -rw------- 1 boinc boinc       424 Jun 22 23:14 setup.sh.local
[2024-06-22 23:15:22] -rw------- 1 boinc boinc   1025930 Jun 22 23:14 agis_schedconf.cvmfs.json
[2024-06-22 23:15:22] -rw------- 1 boinc boinc         0 Jun 22 23:14 agis_ddmendpoints.agis.ALL.json
[2024-06-22 23:15:22] -rw------- 1 boinc boinc   1321363 Jun 22 23:14 cric_ddmendpoints.json
[2024-06-22 23:15:22] -rw------- 1 boinc boinc        94 Jun 22 23:14 pilot_heartbeat.json
[2024-06-22 23:15:22] drwx------ 4 boinc boinc      4096 Jun 22 23:14 pilot3
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc       522 Jun 22 23:14 boinc_task_state.xml
[2024-06-22 23:15:22] -rw------- 1 boinc boinc       938 Jun 22 23:14 memory_monitor_summary.json
[2024-06-22 23:15:22] -rw------- 1 boinc boinc     20338 Jun 22 23:14 log.38921007._054119.job.log.tgz.1
[2024-06-22 23:15:22] -rw------- 1 boinc boinc      8336 Jun 22 23:15 heartbeat.json
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc      8192 Jun 22 23:15 boinc_mmap_file
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc        21 Jun 22 23:15 wrapper_checkpoint.txt
[2024-06-22 23:15:22] -rw------- 1 boinc boinc      4345 Jun 22 23:15 pilotlog.txt
[2024-06-22 23:15:22] -rw------- 1 boinc boinc     66431 Jun 22 23:15 log.38921007._054119.job.log.1
[2024-06-22 23:15:22] -rw------- 1 boinc boinc       188 Jun 22 23:15 output.list
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc       620 Jun 22 23:15 runtime_log
[2024-06-22 23:15:22] -rw------- 1 boinc boinc    102400 Jun 22 23:15 result.tar.gz
[2024-06-22 23:15:22] -rw------- 1 boinc boinc       633 Jun 22 23:15 pNbMDm1wHf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmFfrKDmsQnIKo.diag
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc     11255 Jun 22 23:15 runtime_log.err
[2024-06-22 23:15:22] -rw-r--r-- 1 boinc boinc     21444 Jun 22 23:15 stderr.txt
[2024-06-22 23:15:22] No HITS result produced
[2024-06-22 23:15:22]  *** Contents of shared directory: ***
[2024-06-22 23:15:22] total 569368
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc 582421364 Jun 22 23:14 ATLAS.root_0
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc     17537 Jun 22 23:14 start_atlas.sh
[2024-06-22 23:15:22] -rw-r--r-- 2 boinc boinc    482523 Jun 22 23:14 input.tar.gz
[2024-06-22 23:15:22] -rw------- 1 boinc boinc    102400 Jun 22 23:15 result.tar.gz
23:15:24 (2652961): run_atlas exited; CPU time 19.986535
23:15:24 (2652961): called boinc_finish(0)

</stderr_txt>
]]>

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