Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:30 (1405721): wrapper (7.7.26015): starting
04:05:30 (1405721): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 04:05:30] Arguments: --nthreads 4
[2024-06-23 04:05:30] Threads: 4
[2024-06-23 04:05:30] Checking for CVMFS
[2024-06-23 04:05:30] No cvmfs_config command found, will try listing directly
[2024-06-23 04:05:30] CVMFS is ok
[2024-06-23 04:05:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 04:05:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 04:05:30] Further information can be found at the LHC@home message board.
[2024-06-23 04:05:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 04:05:30] Checking for apptainer binary...
[2024-06-23 04:05:30] which: no apptainer in ((null))
[2024-06-23 04:05:30] apptainer is not installed, using version from CVMFS
[2024-06-23 04:05:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 04:05:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-23 04:05:31] apptainer works
[2024-06-23 04:05:31] Set ATHENA_PROC_NUMBER=4
[2024-06-23 04:05:31] Set ATHENA_CORE_NUMBER=4
[2024-06-23 04:05:31] Starting ATLAS job with PandaID=6241488247
[2024-06-23 04:05:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 04:09:25]  *** The last 200 lines of the pilot log: ***
[2024-06-23 04:09:25] 2024-06-23 02:09:10,837 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6241488247/memory_monitor_summary.json (trf name=prmon)
[2024-06-23 04:09:25] 2024-06-23 02:09:10,838 | INFO     | extracted standard info from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | GPU info not found in prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | found no stored workdir sizes
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | will not add max space = 0 B to job metrics
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | WARNING  | wrong length of table data, x=[1719108390.0], y=[477.0] (must be same and length>=4)
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . Timing measurements:
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . get job = 3 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . initial setup = 21 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload setup = 5 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-in = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload execution = 16 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-out = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . log creation = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6241488247/pilotlog.txt
[2024-06-23 04:09:25] 2024-06-23 02:09:10,855 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-23 04:09:25] - Log from pilotlog.txt -
[2024-06-23 04:09:25] 2024-06-23 02:09:10,838 | INFO     | extracted standard info from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | GPU info not found in prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | found no stored workdir sizes
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | will not add max space = 0 B to job metrics
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | WARNING  | wrong length of table data, x=[1719108390.0], y=[477.0] (must be same and length>=4)
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . Timing measurements:
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . get job = 3 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . initial setup = 21 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload setup = 5 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-in = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload execution = 16 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-out = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . log creation = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6241488247/pilotlog.txt
[2024-06-23 04:09:25] 2024-06-23 02:09:10,856 | WARNING  | 
[2024-06-23 04:09:25] [begin log extracts]
[2024-06-23 04:09:25] - Log from pilotlog.txt -
[2024-06-23 04:09:25] 2024-06-23 02:09:10,838 | INFO     | extracted standard info from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | GPU info not found in prmon json
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | WARNING  | found no stored workdir sizes
[2024-06-23 04:09:25] 2024-06-23 02:09:10,839 | INFO     | will not add max space = 0 B to job metrics
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | WARNING  | wrong length of table data, x=[1719108390.0], y=[477.0] (must be same and length>=4)
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . Timing measurements:
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . get job = 3 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,840 | INFO     | . initial setup = 21 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload setup = 5 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-in = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . payload execution = 16 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . stage-out = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | . log creation = 0 s
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | ..............................
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-23 04:09:25] 2024-06-23 02:09:10,841 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6241488247/pilotlog.txt
[2024-06-23 04:09:25] [end log extracts]
[2024-06-23 04:09:25] 2024-06-23 02:09:10,856 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-23 04:09:25] 2024-06-23 02:09:10,856 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-23 04:06:37,144 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-23 04:09:25] 2024-06-23 02:09:11,113 | INFO     | 
[2024-06-23 04:09:25] 2024-06-23 02:09:11,113 | INFO     | job summary report
[2024-06-23 04:09:25] 2024-06-23 02:09:11,113 | INFO     | --------------------------------------------------
[2024-06-23 04:09:25] 2024-06-23 02:09:11,113 | INFO     | PanDA job id: 6241488247
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | task id: 38921007
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-23 04:06:37,144 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | pilot state: failed 
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | transexitcode: 65
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | exeerrorcode: 65
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | exitcode: 65
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | cpuconsumptiontime: 20 s
[2024-06-23 04:09:25] 2024-06-23 02:09:11,114 | INFO     | nevents: 0
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | neventsw: 0
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | pid: 1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | pgrp: 1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | corecount: 4
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | event service: False
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | sizes: {0: 2387072, 4: 2387278, 11: 2387306, 48: 2414562, 51: 2414562, 171: 2414704}
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | --------------------------------------------------
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | 
[2024-06-23 04:09:25] 2024-06-23 02:09:11,115 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 04:09:25] 2024-06-23 02:09:11,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,135 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 04:09:25] 2024-06-23 02:09:11,135 | INFO     | job 6241488247 has completed (purged errors)
[2024-06-23 04:09:25] 2024-06-23 02:09:11,135 | INFO     | overall cleanup function is called
[2024-06-23 04:09:25] 2024-06-23 02:09:12,141 | INFO     | --- collectZombieJob: --- 10, [1420418]
[2024-06-23 04:09:25] 2024-06-23 02:09:12,141 | INFO     | zombie collector waiting for pid 1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:12,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 04:09:25] 2024-06-23 02:09:13,146 | INFO     | collected zombie processes
[2024-06-23 04:09:25] 2024-06-23 02:09:13,147 | INFO     | will now attempt to kill all subprocesses of pid=1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:13,297 | INFO     | process IDs to be killed: [1420418] (in reverse order)
[2024-06-23 04:09:25] 2024-06-23 02:09:13,398 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 04:09:25] 2024-06-23 02:09:13,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 04:09:25] 2024-06-23 02:09:13,411 | INFO     | did not find any defunct processes belonging to 1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:13,420 | INFO     | did not find any defunct processes belonging to 1420418
[2024-06-23 04:09:25] 2024-06-23 02:09:13,420 | INFO     | ready for new job
[2024-06-23 04:09:25] 2024-06-23 02:09:13,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 04:09:25] 2024-06-23 02:09:13,421 | INFO     | *************************************
[2024-06-23 04:09:25] 2024-06-23 02:09:13,421 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 04:09:25] 2024-06-23 02:09:13,421 | INFO     | *************************************
[2024-06-23 04:09:25] 2024-06-23 02:09:13,422 | INFO     | 
[2024-06-23 04:09:25] 2024-06-23 02:09:13,430 | INFO     | architecture information:
[2024-06-23 04:09:25] 2024-06-23 02:09:13,430 | INFO     | executing command: cat /etc/os-release
[2024-06-23 04:09:25] 2024-06-23 02:09:13,445 | INFO     | cat /etc/os-release:
[2024-06-23 04:09:25] NAME="CentOS Linux"
[2024-06-23 04:09:25] VERSION="7 (Core)"
[2024-06-23 04:09:25] ID="centos"
[2024-06-23 04:09:25] ID_LIKE="rhel fedora"
[2024-06-23 04:09:25] VERSION_ID="7"
[2024-06-23 04:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 04:09:25] ANSI_COLOR="0;31"
[2024-06-23 04:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 04:09:25] HOME_URL="https://www.centos.org/"
[2024-06-23 04:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 04:09:25] 
[2024-06-23 04:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 04:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 04:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 04:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 04:09:25] 
[2024-06-23 04:09:25] 2024-06-23 02:09:13,445 | INFO     | *************************************
[2024-06-23 04:09:25] 2024-06-23 02:09:13,948 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-23 04:09:25] 2024-06-23 02:09:13,968 | INFO     | sufficient remaining disk space (3262798364672 B)
[2024-06-23 04:09:25] 2024-06-23 02:09:13,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 04:09:25] 2024-06-23 02:09:13,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 04:09:25] 2024-06-23 02:09:13,969 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 04:09:25] 2024-06-23 02:09:13,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 04:09:25] 2024-06-23 02:09:13,970 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 04:09:25] 2024-06-23 02:09:13,970 | INFO     | aborting loop
[2024-06-23 04:09:25] 2024-06-23 02:09:13,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 04:09:25] 2024-06-23 02:09:13,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 04:09:25] 2024-06-23 02:09:14,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 04:09:25] 2024-06-23 02:09:14,155 | INFO     | all data control threads have been joined
[2024-06-23 04:09:25] 2024-06-23 02:09:14,973 | INFO     | [job] retrieve thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:14,975 | INFO     | [job] job monitor thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,152 | INFO     | all payload control threads have been joined
[2024-06-23 04:09:25] 2024-06-23 02:09:15,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 04:09:25] 2024-06-23 02:09:15,159 | INFO     | [data] control thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,222 | INFO     | [data] copytool_in thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,222 | INFO     | [job] validate thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,309 | INFO     | [payload] failed_post thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,380 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,493 | INFO     | all job control threads have been joined
[2024-06-23 04:09:25] 2024-06-23 02:09:15,639 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,817 | INFO     | [payload] validate_post thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:15,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 04:09:25] 2024-06-23 02:09:16,156 | INFO     | [payload] control thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:16,172 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:16,297 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:16,499 | INFO     | [job] control thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:16,975 | INFO     | [job] queue monitor thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:17,160 | INFO     | [data] copytool_out thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:18,021 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 04:09:25] 2024-06-23 02:09:19,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47035751158848)>', '<ExcThread(monitor, started 47035957298944)>']
[2024-06-23 04:09:25] 2024-06-23 02:09:20,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 04:09:25] 2024-06-23 02:09:20,002 | INFO     | [monitor] control thread has ended
[2024-06-23 04:09:25] 2024-06-23 02:09:24,401 | INFO     | all workflow threads have been joined
[2024-06-23 04:09:25] 2024-06-23 02:09:24,401 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 04:09:25] 2024-06-23 02:09:24,401 | INFO     | traces error code: 0
[2024-06-23 04:09:25] 2024-06-23 02:09:24,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 04:09:25] 2024-06-23 02:09:24,513 [wrapper] ==== pilot stdout END ====
[2024-06-23 04:09:25] 2024-06-23 02:09:24,516 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 04:09:25] 2024-06-23 02:09:24,518 [wrapper] pilotpid: 1410282
[2024-06-23 04:09:25] 2024-06-23 02:09:24,521 [wrapper] Pilot exit status: 0
[2024-06-23 04:09:25] 2024-06-23 02:09:24,529 [wrapper] pandaids: 6241488247
[2024-06-23 04:09:25] 2024-06-23 02:09:24,580 [wrapper] cleanup supervisor_pilot 1410287 1410283
[2024-06-23 04:09:25] 2024-06-23 02:09:24,583 [wrapper] Test setup, not cleaning
[2024-06-23 04:09:25] 2024-06-23 02:09:24,586 [wrapper] ==== wrapper stdout END ====
[2024-06-23 04:09:25] 2024-06-23 02:09:24,588 [wrapper] ==== wrapper stderr END ====
[2024-06-23 04:09:25] 2024-06-23 02:09:24,593 [wrapper] apfmon messages muted
[2024-06-23 04:09:25]  *** Error codes and diagnostics ***
[2024-06-23 04:09:25]     "exeErrorCode": 65,
[2024-06-23 04:09:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-23 04:09:25]     "pilotErrorCode": 1305,
[2024-06-23 04:09:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-23 04:06:37,144 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-23 04:09:25]  *** Listing of results directory ***
[2024-06-23 04:09:25] total 574312
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc    469766 Jun 22 16:43 pilot3.tar.gz
[2024-06-23 04:09:25] -rwx------ 1 boinc boinc     32308 Jun 22 16:46 runpilot2-wrapper.sh
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc      5654 Jun 22 16:46 queuedata.json
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc       100 Jun 23 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 04:09:25] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 02:06 run_atlas
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc       105 Jun 23 02:06 job.xml
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc      6644 Jun 23 04:05 init_data.xml
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc 585394705 Jun 23 04:05 EVNT.38776201._000491.pool.root.1
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc     17537 Jun 23 04:05 start_atlas.sh
[2024-06-23 04:09:25] drwxrwx--x 2 boinc boinc      4096 Jun 23 04:05 shared
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc    482526 Jun 23 04:05 input.tar.gz
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc         0 Jun 23 04:05 boinc_lockfile
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc      2632 Jun 23 04:05 pandaJob.out
[2024-06-23 04:09:25] -rw------- 1 boinc boinc       424 Jun 23 04:05 setup.sh.local
[2024-06-23 04:09:25] -rw------- 1 boinc boinc         0 Jun 23 04:06 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-23 04:09:25] -rw------- 1 boinc boinc         0 Jun 23 04:06 agis_ddmendpoints.agis.ALL.json
[2024-06-23 04:09:25] -rw------- 1 boinc boinc   1321363 Jun 23 04:06 cric_ddmendpoints.json
[2024-06-23 04:09:25] -rw------- 1 boinc boinc         0 Jun 23 04:06 agis_schedconf.cvmfs.json
[2024-06-23 04:09:25] drwx------ 4 boinc boinc      4096 Jun 23 04:06 pilot3
[2024-06-23 04:09:25] -rw------- 1 boinc boinc       960 Jun 23 04:06 memory_monitor_summary.json
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc       523 Jun 23 04:06 boinc_task_state.xml
[2024-06-23 04:09:25] -rw------- 1 boinc boinc     19946 Jun 23 04:07 log.38921007._054070.job.log.tgz.1
[2024-06-23 04:09:25] -rw------- 1 boinc boinc        95 Jun 23 04:08 pilot_heartbeat.json
[2024-06-23 04:09:25] -rw------- 1 boinc boinc      8313 Jun 23 04:09 heartbeat.json
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc      8192 Jun 23 04:09 boinc_mmap_file
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc        22 Jun 23 04:09 wrapper_checkpoint.txt
[2024-06-23 04:09:25] -rw------- 1 boinc boinc      4346 Jun 23 04:09 pilotlog.txt
[2024-06-23 04:09:25] -rw------- 1 boinc boinc     77926 Jun 23 04:09 log.38921007._054070.job.log.1
[2024-06-23 04:09:25] -rw------- 1 boinc boinc       188 Jun 23 04:09 output.list
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc       620 Jun 23 04:09 runtime_log
[2024-06-23 04:09:25] -rw------- 1 boinc boinc    112640 Jun 23 04:09 result.tar.gz
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc     11275 Jun 23 04:09 runtime_log.err
[2024-06-23 04:09:25] -rw------- 1 boinc boinc       636 Jun 23 04:09 k5xNDmeBHf5n7Olcko1bjSoqABFKDmABFKDmOtvXDmvdrKDmXotkPn.diag
[2024-06-23 04:09:25] -rw-r--r-- 1 boinc boinc     21389 Jun 23 04:09 stderr.txt
[2024-06-23 04:09:25] No HITS result produced
[2024-06-23 04:09:25]  *** Contents of shared directory: ***
[2024-06-23 04:09:25] total 572284
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc 585394705 Jun 23 04:05 ATLAS.root_0
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc     17537 Jun 23 04:05 start_atlas.sh
[2024-06-23 04:09:25] -rw-r--r-- 2 boinc boinc    482526 Jun 23 04:05 input.tar.gz
[2024-06-23 04:09:25] -rw------- 1 boinc boinc    112640 Jun 23 04:09 result.tar.gz
04:09:26 (1405721): run_atlas exited; CPU time 19.370622
04:09:26 (1405721): called boinc_finish(0)

</stderr_txt>
]]>

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