Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:32 (618140): wrapper (7.7.26015): starting
00:48:32 (618140): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 00:48:32] Arguments: --nthreads 12
[2024-06-23 00:48:32] Threads: 12
[2024-06-23 00:48:32] Checking for CVMFS
[2024-06-23 00:48:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 00:48:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 00:48:32] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 00:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 00:48:32] 2.11.2.0 2508 2375 74552 134190 0 56 3421727 4096000 0 65024 0 2127307 99.992 350084 2000 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-23 00:48:32] CVMFS is ok
[2024-06-23 00:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 00:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 00:48:32] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-23 00:48:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-23 00:48:32] Further information can be found at the LHC@home message board.
[2024-06-23 00:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 00:48:32] Checking for apptainer binary...
[2024-06-23 00:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 00:48:32] Running /usr/bin/apptainer --version
[2024-06-23 00:48:32] /usr/bin/apptainer: symbol lookup error: /usr/bin/apptainer: undefined symbol: seccomp_notify_respond
[2024-06-23 00:48:32] apptainer seems to be installed but not working
[2024-06-23 00:48:32] Will use version from CVMFS
[2024-06-23 00:48:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 00:48:33] sarnet8.local
[2024-06-23 00:48:33] apptainer works
[2024-06-23 00:48:33] Set ATHENA_PROC_NUMBER=12
[2024-06-23 00:48:33] Set ATHENA_CORE_NUMBER=12
[2024-06-23 00:48:33] Starting ATLAS job with PandaID=6241456802
[2024-06-23 00:48:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 03:29:22]  *** The last 200 lines of the pilot log: ***
[2024-06-23 03:29:22] 2024-06-23 07:29:06,620 | INFO     | model: linear, x: [1719118141.0, 1719118202.0, 1719118263.0, 1719118324.0, 1719118385.0, 1719118446.0, 1719118507.0, 1719118568.0, 1719118629.0, 1719118690.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,620 | INFO     | sum of square deviations: 1223016419.5
[2024-06-23 03:29:22] 2024-06-23 07:29:06,620 | INFO     | sum of deviations: 52983773084.00003
[2024-06-23 03:29:22] 2024-06-23 07:29:06,620 | INFO     | mean x: 1719122929.5
[2024-06-23 03:29:22] 2024-06-23 07:29:06,620 | INFO     | mean y: 2720955.0506329113
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | -- intersect: -74473482101.46066
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | intersect: -74473482101.46066
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | chi2: 4.414878616314891
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | model: linear, x: [1719118141.0, 1719118202.0, 1719118263.0, 1719118324.0, 1719118385.0, 1719118446.0, 1719118507.0, 1719118568.0, 1719118629.0, 1719118690.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | sum of square deviations: 1110539892.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,621 | INFO     | sum of deviations: 62075085106.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | mean x: 1719122777.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | mean y: 2732890.9607843137
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | -- intersect: -96089891479.11278
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | intersect: -96089891479.11278
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | chi2: 3.7357850006618456
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | current chi2=3.7357850006618456 (change=15.381931751045213 %)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | right removable region: 152
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | model: linear, x: [1719118446.0, 1719118507.0, 1719118568.0, 1719118629.0, 1719118690.0, 1719118751.0, 1719118812.0, 1719118873.0, 1719118934.0, 1719118995.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,622 | INFO     | sum of square deviations: 1110539892.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | sum of deviations: 12972596659.000004
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | mean x: 1719123082.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | mean y: 2774970.5490196077
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | -- intersect: -20078890272.29035
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | intersect: -20078890272.29035
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | chi2: 2.1813986895993533
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | current chi2=2.1813986895993533 (change=50.58983770158167 %)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | model: linear, x: [1719118751.0, 1719118812.0, 1719118873.0, 1719118934.0, 1719118995.0, 1719119056.0, 1719119117.0, 1719119178.0, 1719119239.0, 1719119300.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,623 | INFO     | sum of square deviations: 1005179777.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | sum of deviations: -17816320019.999992
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | mean x: 1719123234.5
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | mean y: 2819543.878378378
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | -- intersect: 30473438233.682655
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | intersect: 30473438233.682655
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | chi2: 0.9652200483788984
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | current chi2=0.9652200483788984 (change=55.75224038682376 %)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | model: linear, x: [1719119056.0, 1719119117.0, 1719119178.0, 1719119239.0, 1719119300.0, 1719119361.0, 1719119422.0, 1719119483.0, 1719119544.0, 1719119605.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,624 | INFO     | sum of square deviations: 906703512.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | sum of deviations: -24068475919.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | mean x: 1719123387.0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | mean y: 2829160.237762238
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | -- intersect: 45637018610.47033
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | intersect: 45637018610.47033
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | chi2: 0.8772656236287326
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | current chi2=0.8772656236287326 (change=9.112370272238604 %)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | left removable region: 30
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | model: linear, x: [1719119971.0, 1719120032.0, 1719120093.0, 1719120154.0, 1719120215.0, 1719120276.0, 1719120337.0, 1719120398.0, 1719120459.0, 1719120520.0, 1719
[2024-06-23 03:29:22] 2024-06-23 07:29:06,625 | INFO     | sum of square deviations: 563026370.5
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | sum of deviations: 3618840860.0000033
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | mean x: 1719123661.5
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | mean y: 2813492.049180328
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | -- intersect: -11046819838.80919
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | intersect: -11046819838.80919
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | chi2: 0.0017340118190216538
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | -- intersect: -11046819838.80919
[2024-06-23 03:29:22] 2024-06-23 07:29:06,626 | INFO     | current memory leak: 6.43 B/s (using 122 data points, chi2=0.00)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | ..............................
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . Timing measurements:
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . get job = 0 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . initial setup = 1 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . payload setup = 3 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . stage-in = 0 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . payload execution = 9597 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . stage-out = 0 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | . log creation = 0 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,627 | INFO     | ..............................
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | 
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | job summary report
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | --------------------------------------------------
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | PanDA job id: 6241456802
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | task id: 38921007
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | errors: (none)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,927 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | pilot state: finished 
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | transexitcode: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | exeerrorcode: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | exeerrordiag: 
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | exitcode: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | exitmsg: OK
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | cpuconsumptiontime: 102291 s
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | nevents: 400
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | neventsw: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | pid: 628809
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | pgrp: 628809
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | corecount: 12
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | event service: False
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | sizes: {0: 2387138, 3: 2387344, 11: 2387372, 9605: 2415575, 9606: 2424535, 9607: 2424591, 9612: 2424889}
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | --------------------------------------------------
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | 
[2024-06-23 03:29:22] 2024-06-23 07:29:06,928 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | job 6241456802 has completed (purged errors)
[2024-06-23 03:29:22] 2024-06-23 07:29:06,952 | INFO     | overall cleanup function is called
[2024-06-23 03:29:22] 2024-06-23 07:29:07,959 | INFO     | --- collectZombieJob: --- 10, [628809]
[2024-06-23 03:29:22] 2024-06-23 07:29:07,959 | INFO     | zombie collector waiting for pid 628809
[2024-06-23 03:29:22] 2024-06-23 07:29:07,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 03:29:22] 2024-06-23 07:29:08,965 | INFO     | collected zombie processes
[2024-06-23 03:29:22] 2024-06-23 07:29:08,965 | INFO     | will now attempt to kill all subprocesses of pid=628809
[2024-06-23 03:29:22] 2024-06-23 07:29:09,011 | INFO     | process IDs to be killed: [628809] (in reverse order)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,042 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 03:29:22] 2024-06-23 07:29:09,044 | INFO     | did not find any defunct processes belonging to 628809
[2024-06-23 03:29:22] 2024-06-23 07:29:09,045 | INFO     | did not find any defunct processes belonging to 628809
[2024-06-23 03:29:22] 2024-06-23 07:29:09,045 | INFO     | ready for new job
[2024-06-23 03:29:22] 2024-06-23 07:29:09,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 03:29:22] 2024-06-23 07:29:09,046 | INFO     | *************************************
[2024-06-23 03:29:22] 2024-06-23 07:29:09,046 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 03:29:22] 2024-06-23 07:29:09,047 | INFO     | *************************************
[2024-06-23 03:29:22] 2024-06-23 07:29:09,047 | INFO     | 
[2024-06-23 03:29:22] 2024-06-23 07:29:09,047 | INFO     | pilot is running in a VM
[2024-06-23 03:29:22] 2024-06-23 07:29:09,047 | INFO     | architecture information:
[2024-06-23 03:29:22] 2024-06-23 07:29:09,047 | INFO     | executing command: cat /etc/os-release
[2024-06-23 03:29:22] 2024-06-23 07:29:09,061 | INFO     | cat /etc/os-release:
[2024-06-23 03:29:22] NAME="CentOS Linux"
[2024-06-23 03:29:22] VERSION="7 (Core)"
[2024-06-23 03:29:22] ID="centos"
[2024-06-23 03:29:22] ID_LIKE="rhel fedora"
[2024-06-23 03:29:22] VERSION_ID="7"
[2024-06-23 03:29:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 03:29:22] ANSI_COLOR="0;31"
[2024-06-23 03:29:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 03:29:22] HOME_URL="https://www.centos.org/"
[2024-06-23 03:29:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 03:29:22] 
[2024-06-23 03:29:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 03:29:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 03:29:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 03:29:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 03:29:22] 
[2024-06-23 03:29:22] 2024-06-23 07:29:09,061 | INFO     | *************************************
[2024-06-23 03:29:22] 2024-06-23 07:29:09,564 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 03:29:22] 2024-06-23 07:29:09,585 | INFO     | sufficient remaining disk space (30346838016 B)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 03:29:22] 2024-06-23 07:29:09,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,585 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,585 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 03:29:22] 2024-06-23 07:29:09,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 03:29:22] 2024-06-23 07:29:09,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 03:29:22] 2024-06-23 07:29:09,816 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-23 03:29:22] 2024-06-23 07:29:09,816 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-23 03:29:22] 2024-06-23 07:29:09,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 03:29:22] 2024-06-23 07:29:09,816 | INFO     | will abort loop
[2024-06-23 03:29:22] 2024-06-23 07:29:09,879 | INFO     | all data control threads have been joined
[2024-06-23 03:29:22] 2024-06-23 07:29:09,908 | INFO     | all job control threads have been joined
[2024-06-23 03:29:22] 2024-06-23 07:29:10,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 03:29:22] 2024-06-23 07:29:10,590 | INFO     | [job] retrieve thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:10,608 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:10,816 | INFO     | [job] job monitor thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:10,884 | INFO     | [data] control thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:10,913 | INFO     | [job] control thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:10,938 | INFO     | all payload control threads have been joined
[2024-06-23 03:29:22] 2024-06-23 07:29:10,967 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:11,058 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:11,165 | INFO     | [job] validate thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:11,381 | INFO     | [payload] validate_post thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:11,537 | INFO     | [data] copytool_in thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:11,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 03:29:22] 2024-06-23 07:29:11,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 03:29:22] 2024-06-23 07:29:11,943 | INFO     | [payload] control thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:12,042 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:12,181 | INFO     | [payload] failed_post thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:12,549 | INFO     | [data] copytool_out thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:12,687 | INFO     | [job] queue monitor thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:15,789 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 03:29:22] 2024-06-23 07:29:17,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677786076992)>', '<ExcThread(monitor, started 140677224593152)>']
[2024-06-23 03:29:22] 2024-06-23 07:29:17,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 03:29:22] 2024-06-23 07:29:17,626 | INFO     | [monitor] control thread has ended
[2024-06-23 03:29:22] 2024-06-23 07:29:22,295 | INFO     | all workflow threads have been joined
[2024-06-23 03:29:22] 2024-06-23 07:29:22,296 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 03:29:22] 2024-06-23 07:29:22,296 | INFO     | traces error code: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:22,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 03:29:22] 2024-06-23 07:29:22,360 [wrapper] ==== pilot stdout END ====
[2024-06-23 03:29:22] 2024-06-23 07:29:22,361 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 03:29:22] 2024-06-23 07:29:22,363 [wrapper] pilotpid: 622338
[2024-06-23 03:29:22] 2024-06-23 07:29:22,365 [wrapper] Pilot exit status: 0
[2024-06-23 03:29:22] 2024-06-23 07:29:22,372 [wrapper] pandaids: 6241456802
[2024-06-23 03:29:22] 2024-06-23 07:29:22,390 [wrapper] cleanup supervisor_pilot  653483 622339
[2024-06-23 03:29:22] 2024-06-23 07:29:22,392 [wrapper] Test setup, not cleaning
[2024-06-23 03:29:22] 2024-06-23 07:29:22,394 [wrapper] ==== wrapper stdout END ====
[2024-06-23 03:29:22] 2024-06-23 07:29:22,396 [wrapper] ==== wrapper stderr END ====
[2024-06-23 03:29:22] 2024-06-23 07:29:22,400 [wrapper] apfmon messages muted
[2024-06-23 03:29:22]  *** Error codes and diagnostics ***
[2024-06-23 03:29:22]     "exeErrorCode": 0,
[2024-06-23 03:29:22]     "exeErrorDiag": "",
[2024-06-23 03:29:22]     "pilotErrorCode": 0,
[2024-06-23 03:29:22]     "pilotErrorDiag": "",
[2024-06-23 03:29:22]  *** Listing of results directory ***
[2024-06-23 03:29:22] total 914828
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc    469766 Jun 22 09:30 pilot3.tar.gz
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc      5654 Jun 22 09:37 queuedata.json
[2024-06-23 03:29:22] -rwx------. 1 boinc boinc     32308 Jun 22 09:37 runpilot2-wrapper.sh
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc       100 Jun 23 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 03:29:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun 23 00:48 run_atlas
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc       105 Jun 23 00:48 job.xml
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc     17537 Jun 23 00:48 start_atlas.sh
[2024-06-23 03:29:22] drwxrwx--x. 2 boinc boinc        68 Jun 23 00:48 shared
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc    482534 Jun 23 00:48 input.tar.gz
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc      6167 Jun 23 00:48 init_data.xml
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc 583534097 Jun 23 00:48 EVNT.38776201._000738.pool.root.1
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc         0 Jun 23 00:48 boinc_lockfile
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc      2632 Jun 23 00:48 pandaJob.out
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc       424 Jun 23 00:48 setup.sh.local
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc   1026046 Jun 23 00:48 agis_schedconf.cvmfs.json
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc         0 Jun 23 00:48 agis_ddmendpoints.agis.ALL.json
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc   1321363 Jun 23 00:48 cric_ddmendpoints.json
[2024-06-23 03:29:22] drwx------. 4 boinc boinc      4096 Jun 23 00:48 pilot3
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc       531 Jun 23 03:28 boinc_task_state.xml
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc 347120930 Jun 23 03:28 HITS.38921007._054035.pool.root.1
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc        95 Jun 23 03:28 pilot_heartbeat.json
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc      1040 Jun 23 03:28 memory_monitor_summary.json
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc    422559 Jun 23 03:28 log.38921007._054035.job.log.tgz.1
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc      7743 Jun 23 03:29 heartbeat.json
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc      8192 Jun 23 03:29 boinc_mmap_file
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc        28 Jun 23 03:29 wrapper_checkpoint.txt
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc      4582 Jun 23 03:29 pilotlog.txt
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc    876590 Jun 23 03:29 log.38921007._054035.job.log.1
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc       357 Jun 23 03:29 output.list
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc       620 Jun 23 03:29 runtime_log
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc   1320960 Jun 23 03:29 result.tar.gz
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc     10988 Jun 23 03:29 runtime_log.err
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc       648 Jun 23 03:29 9mlNDmA7Ff5n7Olcko1bjSoqABFKDmABFKDmOtvXDmScrKDmulHTlm.diag
[2024-06-23 03:29:22] -rw-r--r--. 1 boinc boinc     22050 Jun 23 03:29 stderr.txt
[2024-06-23 03:29:22] HITS file was successfully produced:
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc 347120930 Jun 23 03:28 shared/HITS.pool.root.1
[2024-06-23 03:29:22]  *** Contents of shared directory: ***
[2024-06-23 03:29:22] total 910632
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc     17537 Jun 23 00:48 start_atlas.sh
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc    482534 Jun 23 00:48 input.tar.gz
[2024-06-23 03:29:22] -rw-r--r--. 2 boinc boinc 583534097 Jun 23 00:48 ATLAS.root_0
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc 347120930 Jun 23 03:28 HITS.pool.root.1
[2024-06-23 03:29:22] -rw-------. 1 boinc boinc   1320960 Jun 23 03:29 result.tar.gz
03:29:24 (618140): run_atlas exited; CPU time 102254.472999
03:29:24 (618140): called boinc_finish(0)

</stderr_txt>
]]>

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