Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:55:43 (730370): wrapper (7.7.26015): starting
07:55:43 (730370): wrapper: running run_atlas (--nthreads 3)
[2024-06-22 07:55:43] Arguments: --nthreads 3
[2024-06-22 07:55:43] Threads: 3
[2024-06-22 07:55:43] Checking for CVMFS
[2024-06-22 07:55:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 07:55:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 07:55:43] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 07:55:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 07:55:44] 2.11.3.0 4014315 644 40780 134169 0 189 4654581 6144001 9093 130560 0 3231532 99.998 98148 1574 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.188.245:3126 1
[2024-06-22 07:55:44] CVMFS is ok
[2024-06-22 07:55:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 07:55:44] Checking for apptainer binary...
[2024-06-22 07:55:44] apptainer is not installed, using version from CVMFS
[2024-06-22 07:55:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 07:55:44] h12dsi-n6
[2024-06-22 07:55:44] apptainer works
[2024-06-22 07:55:44] Set ATHENA_PROC_NUMBER=3
[2024-06-22 07:55:44] Set ATHENA_CORE_NUMBER=3
[2024-06-22 07:55:44] Starting ATLAS job with PandaID=6241409421
[2024-06-22 07:55:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/85 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:22:05]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:22:05] 2024-06-23 04:21:48,770 | INFO     | current chi2=5.388660980455977 (change=0.002749884419788576 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,770 | INFO     | right removable region: 786
[2024-06-22 21:22:05] 2024-06-23 04:21:48,771 | INFO     | model: linear, x: [1719068497.0, 1719068558.0, 1719068619.0, 1719068680.0, 1719068741.0, 1719068802.0, 1719068863.0, 1719068924.0, 1719068985.0, 1719069046.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,772 | INFO     | sum of square deviations: 151147831178.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,786 | INFO     | sum of deviations: 412309693178.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,786 | INFO     | mean x: 1719092470.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,786 | INFO     | mean y: 2312359.177890724
[2024-06-22 21:22:05] 2024-06-23 04:21:48,786 | INFO     | -- intersect: -4687126340.181216
[2024-06-22 21:22:05] 2024-06-23 04:21:48,786 | INFO     | intersect: -4687126340.181216
[2024-06-22 21:22:05] 2024-06-23 04:21:48,787 | INFO     | chi2: 2.6984180279266403
[2024-06-22 21:22:05] 2024-06-23 04:21:48,787 | INFO     | current chi2=2.6984180279266403 (change=49.925522605035326 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,788 | INFO     | model: linear, x: [1719068802.0, 1719068863.0, 1719068924.0, 1719068985.0, 1719069046.0, 1719069107.0, 1719069168.0, 1719069229.0, 1719069290.0, 1719069351.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,788 | INFO     | sum of square deviations: 148285256575.5
[2024-06-22 21:22:05] 2024-06-23 04:21:48,802 | INFO     | sum of deviations: 259841268150.49997
[2024-06-22 21:22:05] 2024-06-23 04:21:48,802 | INFO     | mean x: 1719092622.5
[2024-06-22 21:22:05] 2024-06-23 04:21:48,802 | INFO     | mean y: 2320481.1368286447
[2024-06-22 21:22:05] 2024-06-23 04:21:48,802 | INFO     | -- intersect: -3010057265.744125
[2024-06-22 21:22:05] 2024-06-23 04:21:48,802 | INFO     | intersect: -3010057265.744125
[2024-06-22 21:22:05] 2024-06-23 04:21:48,803 | INFO     | chi2: 1.1926225747852388
[2024-06-22 21:22:05] 2024-06-23 04:21:48,803 | INFO     | current chi2=1.1926225747852388 (change=55.80289775555629 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,804 | INFO     | model: linear, x: [1719069107.0, 1719069168.0, 1719069229.0, 1719069290.0, 1719069351.0, 1719069412.0, 1719069473.0, 1719069534.0, 1719069595.0, 1719069656.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,804 | INFO     | sum of square deviations: 145459054748.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,818 | INFO     | sum of deviations: 130505012535.00002
[2024-06-22 21:22:05] 2024-06-23 04:21:48,818 | INFO     | mean x: 1719092775.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,818 | INFO     | mean y: 2327454.626769627
[2024-06-22 21:22:05] 2024-06-23 04:21:48,818 | INFO     | -- intersect: -1540032521.098892
[2024-06-22 21:22:05] 2024-06-23 04:21:48,818 | INFO     | intersect: -1540032521.098892
[2024-06-22 21:22:05] 2024-06-23 04:21:48,819 | INFO     | chi2: 0.01702058480156515
[2024-06-22 21:22:05] 2024-06-23 04:21:48,819 | INFO     | current chi2=0.01702058480156515 (change=98.57284398589971 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,820 | INFO     | model: linear, x: [1719069412.0, 1719069473.0, 1719069534.0, 1719069595.0, 1719069656.0, 1719069717.0, 1719069778.0, 1719069839.0, 1719069900.0, 1719069961.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,820 | INFO     | sum of square deviations: 142668993133.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,834 | INFO     | sum of deviations: 117771063095.50002
[2024-06-22 21:22:05] 2024-06-23 04:21:48,834 | INFO     | mean x: 1719092927.5
[2024-06-22 21:22:05] 2024-06-23 04:21:48,834 | INFO     | mean y: 2328149.897668394
[2024-06-22 21:22:05] 2024-06-23 04:21:48,834 | INFO     | -- intersect: -1416756664.4382122
[2024-06-22 21:22:05] 2024-06-23 04:21:48,834 | INFO     | intersect: -1416756664.4382122
[2024-06-22 21:22:05] 2024-06-23 04:21:48,835 | INFO     | chi2: 0.008205403799084172
[2024-06-22 21:22:05] 2024-06-23 04:21:48,835 | INFO     | current chi2=0.008205403799084172 (change=51.79129333834855 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,836 | INFO     | model: linear, x: [1719069717.0, 1719069778.0, 1719069839.0, 1719069900.0, 1719069961.0, 1719070022.0, 1719070083.0, 1719070144.0, 1719070205.0, 1719070266.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,836 | INFO     | sum of square deviations: 139914839168.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,849 | INFO     | sum of deviations: 115549765754.99991
[2024-06-22 21:22:05] 2024-06-23 04:21:48,850 | INFO     | mean x: 1719093080.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,850 | INFO     | mean y: 2328272.691003911
[2024-06-22 21:22:05] 2024-06-23 04:21:48,850 | INFO     | -- intersect: -1417398211.5493653
[2024-06-22 21:22:05] 2024-06-23 04:21:48,850 | INFO     | intersect: -1417398211.5493653
[2024-06-22 21:22:05] 2024-06-23 04:21:48,851 | INFO     | chi2: 0.008124970951594502
[2024-06-22 21:22:05] 2024-06-23 04:21:48,851 | INFO     | current chi2=0.008124970951594502 (change=0.9802424043853621 %)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,851 | INFO     | left removable region: 50
[2024-06-22 21:22:05] 2024-06-23 04:21:48,851 | INFO     | model: linear, x: [1719071242.0, 1719071303.0, 1719071364.0, 1719071425.0, 1719071486.0, 1719071547.0, 1719071608.0, 1719071669.0, 1719071730.0, 1719071791.0, 1719
[2024-06-22 21:22:05] 2024-06-23 04:21:48,852 | INFO     | sum of square deviations: 123626355160.0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,864 | INFO     | sum of deviations: 97383526493.99997
[2024-06-22 21:22:05] 2024-06-23 04:21:48,864 | INFO     | mean x: 1719093659.5
[2024-06-22 21:22:05] 2024-06-23 04:21:48,864 | INFO     | mean y: 2329167.9239130435
[2024-06-22 21:22:05] 2024-06-23 04:21:48,864 | INFO     | -- intersect: -1351843271.4310937
[2024-06-22 21:22:05] 2024-06-23 04:21:48,865 | INFO     | intersect: -1351843271.4310937
[2024-06-22 21:22:05] 2024-06-23 04:21:48,865 | INFO     | chi2: 0.005211558291748496
[2024-06-22 21:22:05] 2024-06-23 04:21:48,865 | INFO     | -- intersect: -1351843271.4310937
[2024-06-22 21:22:05] 2024-06-23 04:21:48,866 | INFO     | current memory leak: 0.79 B/s (using 736 data points, chi2=0.01)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,866 | INFO     | ..............................
[2024-06-22 21:22:05] 2024-06-23 04:21:48,866 | INFO     | . Timing measurements:
[2024-06-22 21:22:05] 2024-06-23 04:21:48,866 | INFO     | . get job = 0 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . initial setup = 2 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . payload setup = 8 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . stage-in = 0 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . payload execution = 48304 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . stage-out = 2 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | . log creation = 0 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,867 | INFO     | ..............................
[2024-06-22 21:22:05] 2024-06-23 04:21:48,868 | INFO     | monitor loop #3685: job 0:6241409421 is in state 'finished'
[2024-06-22 21:22:05] 2024-06-23 04:21:48,873 | WARNING  | exception caught: deque index out of range
[2024-06-22 21:22:05] 2024-06-23 04:21:48,961 | INFO     | 
[2024-06-22 21:22:05] 2024-06-23 04:21:48,961 | INFO     | job summary report
[2024-06-22 21:22:05] 2024-06-23 04:21:48,961 | INFO     | --------------------------------------------------
[2024-06-22 21:22:05] 2024-06-23 04:21:48,961 | INFO     | PanDA job id: 6241409421
[2024-06-22 21:22:05] 2024-06-23 04:21:48,961 | INFO     | task id: 38921013
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | errors: (none)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | pilot state: finished 
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | transexitcode: 0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | exeerrorcode: 0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | exeerrordiag: 
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | exitcode: 0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | exitmsg: OK
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | cpuconsumptiontime: 143028 s
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | nevents: 400
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | neventsw: 0
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | pid: 745169
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | pgrp: 745169
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | corecount: 3
[2024-06-22 21:22:05] 2024-06-23 04:21:48,962 | INFO     | event service: False
[2024-06-22 21:22:05] 2024-06-23 04:21:48,963 | INFO     | sizes: {0: 2387042, 6: 2387248, 11: 2387276, 48316: 2433633, 48319: 2442609, 48321: 2442665, 48331: 2442963}
[2024-06-22 21:22:05] 2024-06-23 04:21:48,963 | INFO     | --------------------------------------------------
[2024-06-22 21:22:05] 2024-06-23 04:21:48,963 | INFO     | 
[2024-06-22 21:22:05] 2024-06-23 04:21:48,963 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/85
[2024-06-22 21:22:05] 2024-06-23 04:21:48,997 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | job 6241409421 has completed (purged errors)
[2024-06-22 21:22:05] 2024-06-23 04:21:48,999 | INFO     | overall cleanup function is called
[2024-06-22 21:22:05] 2024-06-23 04:21:50,008 | INFO     | --- collectZombieJob: --- 10, [745169]
[2024-06-22 21:22:05] 2024-06-23 04:21:50,008 | INFO     | zombie collector waiting for pid 745169
[2024-06-22 21:22:05] 2024-06-23 04:21:50,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:22:05] 2024-06-23 04:21:51,013 | INFO     | collected zombie processes
[2024-06-22 21:22:05] 2024-06-23 04:21:51,013 | INFO     | will now attempt to kill all subprocesses of pid=745169
[2024-06-22 21:22:05] 2024-06-23 04:21:51,199 | INFO     | process IDs to be killed: [745169] (in reverse order)
[2024-06-22 21:22:05] 2024-06-23 04:21:51,404 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:22:05] 2024-06-23 04:21:51,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:22:05] 2024-06-23 04:21:51,422 | INFO     | did not find any defunct processes belonging to 745169
[2024-06-22 21:22:05] 2024-06-23 04:21:51,441 | INFO     | did not find any defunct processes belonging to 745169
[2024-06-22 21:22:05] 2024-06-23 04:21:51,441 | INFO     | ready for new job
[2024-06-22 21:22:05] 2024-06-23 04:21:51,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:22:05] 2024-06-23 04:21:51,447 | INFO     | *************************************
[2024-06-22 21:22:05] 2024-06-23 04:21:51,447 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:22:05] 2024-06-23 04:21:51,447 | INFO     | *************************************
[2024-06-22 21:22:05] 2024-06-23 04:21:51,447 | INFO     | 
[2024-06-22 21:22:05] 2024-06-23 04:21:51,454 | INFO     | architecture information:
[2024-06-22 21:22:05] 2024-06-23 04:21:51,454 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:22:05] 2024-06-23 04:21:51,483 | INFO     | cat /etc/os-release:
[2024-06-22 21:22:05] NAME="CentOS Linux"
[2024-06-22 21:22:05] VERSION="7 (Core)"
[2024-06-22 21:22:05] ID="centos"
[2024-06-22 21:22:05] ID_LIKE="rhel fedora"
[2024-06-22 21:22:05] VERSION_ID="7"
[2024-06-22 21:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:22:05] ANSI_COLOR="0;31"
[2024-06-22 21:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:22:05] HOME_URL="https://www.centos.org/"
[2024-06-22 21:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:22:05] 
[2024-06-22 21:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:22:05] 
[2024-06-22 21:22:05] 2024-06-23 04:21:51,483 | INFO     | *************************************
[2024-06-22 21:22:05] 2024-06-23 04:21:51,985 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/85
[2024-06-22 21:22:05] 2024-06-23 04:21:52,013 | INFO     | sufficient remaining disk space (394624237568 B)
[2024-06-22 21:22:05] 2024-06-23 04:21:52,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:22:05] 2024-06-23 04:21:52,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:22:05] 2024-06-23 04:21:52,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:22:05] 2024-06-23 04:21:52,330 | INFO     | all data control threads have been joined
[2024-06-22 21:22:05] 2024-06-23 04:21:52,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:22:05] 2024-06-23 04:21:52,387 | INFO     | aborting loop
[2024-06-22 21:22:05] 2024-06-23 04:21:52,860 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:22:05] 2024-06-23 04:21:52,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:22:05] 2024-06-23 04:21:52,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:22:05] 2024-06-23 04:21:52,940 | INFO     | all job control threads have been joined
[2024-06-22 21:22:05] 2024-06-23 04:21:53,018 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,284 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,329 | INFO     | all payload control threads have been joined
[2024-06-22 21:22:05] 2024-06-23 04:21:53,335 | INFO     | [data] control thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,392 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,537 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,598 | INFO     | [job] validate thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:22:05] 2024-06-23 04:21:53,746 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,945 | INFO     | [job] control thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,953 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,966 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:53,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:22:05] 2024-06-23 04:21:54,165 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:54,252 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:54,334 | INFO     | [payload] control thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:54,372 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:54,976 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:57,755 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:22:05] 2024-06-23 04:21:59,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134824705255232)>', '<ExcThread(monitor, started 134824291469056)>']
[2024-06-22 21:22:05] 2024-06-23 04:21:59,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:22:05] 2024-06-23 04:21:59,895 | INFO     | [monitor] control thread has ended
[2024-06-22 21:22:05] 2024-06-23 04:22:04,740 | INFO     | all workflow threads have been joined
[2024-06-22 21:22:05] 2024-06-23 04:22:04,740 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:22:05] 2024-06-23 04:22:04,740 | INFO     | traces error code: 0
[2024-06-22 21:22:05] 2024-06-23 04:22:04,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:22:05] 2024-06-23 04:22:04,852 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:22:05] 2024-06-23 04:22:04,856 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:22:05] 2024-06-23 04:22:04,863 [wrapper] pilotpid: 736448
[2024-06-22 21:22:05] 2024-06-23 04:22:04,867 [wrapper] Pilot exit status: 0
[2024-06-22 21:22:05] 2024-06-23 04:22:04,884 [wrapper] pandaids: 6241409421
[2024-06-22 21:22:05] 2024-06-23 04:22:04,993 [wrapper] cleanup supervisor_pilot 2512138 736449
[2024-06-22 21:22:05] 2024-06-23 04:22:04,998 [wrapper] Test setup, not cleaning
[2024-06-22 21:22:05] 2024-06-23 04:22:05,002 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:22:05] 2024-06-23 04:22:05,009 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:22:05] 2024-06-23 04:22:05,022 [wrapper] apfmon messages muted
[2024-06-22 21:22:05]  *** Error codes and diagnostics ***
[2024-06-22 21:22:05]     "exeErrorCode": 0,
[2024-06-22 21:22:05]     "exeErrorDiag": "",
[2024-06-22 21:22:05]     "pilotErrorCode": 0,
[2024-06-22 21:22:05]     "pilotErrorDiag": "",
[2024-06-22 21:22:05]  *** Listing of results directory ***
[2024-06-22 21:22:05] total 886736
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc    469766 Jun 22 04:36 pilot3.tar.gz
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc      5654 Jun 22 05:05 queuedata.json
[2024-06-22 21:22:05] -rwx------ 1 boinc boinc     32308 Jun 22 05:05 runpilot2-wrapper.sh
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc       100 Jun 22 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:22:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 07:55 run_atlas
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc       105 Jun 22 07:55 job.xml
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc 540699811 Jun 22 07:55 EVNT.38776210._000972.pool.root.1
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:55 start_atlas.sh
[2024-06-22 21:22:05] drwxrwx--x 2 boinc boinc      4096 Jun 22 07:55 shared
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc    482537 Jun 22 07:55 input.tar.gz
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc         0 Jun 22 07:55 boinc_lockfile
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc      2648 Jun 22 07:55 pandaJob.out
[2024-06-22 21:22:05] -rw------- 1 boinc boinc       424 Jun 22 07:55 setup.sh.local
[2024-06-22 21:22:05] -rw------- 1 boinc boinc   1025922 Jun 22 07:55 agis_schedconf.cvmfs.json
[2024-06-22 21:22:05] -rw------- 1 boinc boinc   1321363 Jun 22 07:55 cric_ddmendpoints.json
[2024-06-22 21:22:05] drwx------ 4 boinc boinc      4096 Jun 22 07:56 pilot3
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc      7368 Jun 22 14:08 init_data.xml
[2024-06-22 21:22:05] -rw------- 1 boinc boinc 349643313 Jun 22 21:20 HITS.38921013._053471.pool.root.1
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc       533 Jun 22 21:20 boinc_task_state.xml
[2024-06-22 21:22:05] -rw------- 1 boinc boinc        95 Jun 22 21:21 pilot_heartbeat.json
[2024-06-22 21:22:05] -rw------- 1 boinc boinc      1027 Jun 22 21:21 memory_monitor_summary.json
[2024-06-22 21:22:05] -rw------- 1 boinc boinc         0 Jun 22 21:21 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:22:05] -rw------- 1 boinc boinc    719663 Jun 22 21:21 log.38921013._053471.job.log.tgz.1
[2024-06-22 21:22:05] -rw------- 1 boinc boinc      7651 Jun 22 21:21 heartbeat.json
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc      8192 Jun 22 21:22 boinc_mmap_file
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc        29 Jun 22 21:22 wrapper_checkpoint.txt
[2024-06-22 21:22:05] -rw------- 1 boinc boinc      4220 Jun 22 21:22 pilotlog.txt
[2024-06-22 21:22:05] -rw------- 1 boinc boinc   6349907 Jun 22 21:22 log.38921013._053471.job.log.1
[2024-06-22 21:22:05] -rw------- 1 boinc boinc       357 Jun 22 21:22 output.list
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc       620 Jun 22 21:22 runtime_log
[2024-06-22 21:22:05] -rw------- 1 boinc boinc   7086080 Jun 22 21:22 result.tar.gz
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc     11153 Jun 22 21:22 runtime_log.err
[2024-06-22 21:22:05] -rw------- 1 boinc boinc       651 Jun 22 21:22 LKWLDmjfEf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmDeYKDmJgDgFn.diag
[2024-06-22 21:22:05] -rw-r--r-- 1 boinc boinc     21334 Jun 22 21:22 stderr.txt
[2024-06-22 21:22:05] HITS file was successfully produced:
[2024-06-22 21:22:05] -rw------- 1 boinc boinc 349643313 Jun 22 21:20 shared/HITS.pool.root.1
[2024-06-22 21:22:05]  *** Contents of shared directory: ***
[2024-06-22 21:22:05] total 876900
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc 540699811 Jun 22 07:55 ATLAS.root_0
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:55 start_atlas.sh
[2024-06-22 21:22:05] -rw-r--r-- 2 boinc boinc    482537 Jun 22 07:55 input.tar.gz
[2024-06-22 21:22:05] -rw------- 1 boinc boinc 349643313 Jun 22 21:20 HITS.pool.root.1
[2024-06-22 21:22:05] -rw------- 1 boinc boinc   7086080 Jun 22 21:22 result.tar.gz
21:22:06 (730370): run_atlas exited; CPU time 142283.828054
21:22:06 (730370): called boinc_finish(0)

</stderr_txt>
]]>

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