Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:32 (274894): wrapper (7.7.26015): starting
21:03:32 (274894): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 21:03:32] Arguments: --nthreads 4
[2024-06-22 21:03:32] Threads: 4
[2024-06-22 21:03:32] Checking for CVMFS
[2024-06-22 21:03:32] No cvmfs_config command found, will try listing directly
[2024-06-22 21:03:32] CVMFS is ok
[2024-06-22 21:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 21:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 21:03:32] Further information can be found at the LHC@home message board.
[2024-06-22 21:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 21:03:32] Checking for apptainer binary...
[2024-06-22 21:03:32] which: no apptainer in ((null))
[2024-06-22 21:03:32] apptainer is not installed, using version from CVMFS
[2024-06-22 21:03:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 21:03:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 21:03:33] apptainer works
[2024-06-22 21:03:33] Set ATHENA_PROC_NUMBER=4
[2024-06-22 21:03:33] Set ATHENA_CORE_NUMBER=4
[2024-06-22 21:03:33] Starting ATLAS job with PandaID=6241401057
[2024-06-22 21:03:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:04:51]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:04:51] 2024-06-22 19:04:33,166 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 21:04:51] 2024-06-22 19:04:33,167 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6241401057/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard info from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | found no stored workdir sizes
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | WARNING  | wrong length of table data, x=[1719083048.0], y=[496.0] (must be same and length>=4)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . Timing measurements:
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . get job = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . initial setup = 1 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . payload setup = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . stage-in = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . payload execution = 17 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . stage-out = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . log creation = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6241401057/pilotlog.txt
[2024-06-22 21:04:51] 2024-06-22 19:04:33,183 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 21:04:51] - Log from pilotlog.txt -
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard info from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | found no stored workdir sizes
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | WARNING  | wrong length of table data, x=[1719083048.0], y=[496.0] (must be same and length>=4)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . Timing measurements:
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . get job = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . initial setup = 1 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . payload setup = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . stage-in = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . payload execution = 17 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . stage-out = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . log creation = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6241401057/pilotlog.txt
[2024-06-22 21:04:51] 2024-06-22 19:04:33,183 | WARNING  | 
[2024-06-22 21:04:51] [begin log extracts]
[2024-06-22 21:04:51] - Log from pilotlog.txt -
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard info from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,168 | WARNING  | GPU info not found in prmon json
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | WARNING  | found no stored workdir sizes
[2024-06-22 21:04:51] 2024-06-22 19:04:33,169 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | WARNING  | wrong length of table data, x=[1719083048.0], y=[496.0] (must be same and length>=4)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . Timing measurements:
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . get job = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . initial setup = 1 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . payload setup = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,170 | INFO     | . stage-in = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . payload execution = 17 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . stage-out = 5 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | . log creation = 0 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | ..............................
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 21:04:51] 2024-06-22 19:04:33,171 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6241401057/pilotlog.txt
[2024-06-22 21:04:51] [end log extracts]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,183 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,183 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:04:16,226 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | 
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | job summary report
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | --------------------------------------------------
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | PanDA job id: 6241401057
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | task id: 38920982
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:04:16,226 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | pilot state: failed 
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | transexitcode: 65
[2024-06-22 21:04:51] 2024-06-22 19:04:33,279 | INFO     | exeerrorcode: 65
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | exitcode: 65
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | cpuconsumptiontime: 21 s
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | nevents: 0
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | neventsw: 0
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | pid: 302732
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | pgrp: 302732
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | corecount: 4
[2024-06-22 21:04:51] 2024-06-22 19:04:33,280 | INFO     | event service: False
[2024-06-22 21:04:51] 2024-06-22 19:04:33,281 | INFO     | sizes: {0: 2386895, 1: 2387094, 5: 2387300, 11: 2387356, 26: 2410597, 27: 2414966, 28: 2414966, 30: 2414994, 31: 2415022, 32: 2414994, 36: 2415192}
[2024-06-22 21:04:51] 2024-06-22 19:04:33,281 | INFO     | --------------------------------------------------
[2024-06-22 21:04:51] 2024-06-22 19:04:33,281 | INFO     | 
[2024-06-22 21:04:51] 2024-06-22 19:04:33,281 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-06-22 21:04:51] 2024-06-22 19:04:33,298 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,298 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,298 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,298 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,300 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:04:51] 2024-06-22 19:04:33,300 | INFO     | job 6241401057 has completed (purged errors)
[2024-06-22 21:04:51] 2024-06-22 19:04:33,300 | INFO     | overall cleanup function is called
[2024-06-22 21:04:51] 2024-06-22 19:04:34,306 | INFO     | --- collectZombieJob: --- 10, [302732]
[2024-06-22 21:04:51] 2024-06-22 19:04:34,306 | INFO     | zombie collector waiting for pid 302732
[2024-06-22 21:04:51] 2024-06-22 19:04:34,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:04:51] 2024-06-22 19:04:35,311 | INFO     | collected zombie processes
[2024-06-22 21:04:51] 2024-06-22 19:04:35,311 | INFO     | will now attempt to kill all subprocesses of pid=302732
[2024-06-22 21:04:51] 2024-06-22 19:04:35,519 | INFO     | process IDs to be killed: [302732] (in reverse order)
[2024-06-22 21:04:51] 2024-06-22 19:04:35,657 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:04:51] 2024-06-22 19:04:35,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:04:51] 2024-06-22 19:04:35,673 | INFO     | did not find any defunct processes belonging to 302732
[2024-06-22 21:04:51] 2024-06-22 19:04:35,683 | INFO     | did not find any defunct processes belonging to 302732
[2024-06-22 21:04:51] 2024-06-22 19:04:35,683 | INFO     | ready for new job
[2024-06-22 21:04:51] 2024-06-22 19:04:35,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:04:51] 2024-06-22 19:04:35,685 | INFO     | *************************************
[2024-06-22 21:04:51] 2024-06-22 19:04:35,685 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:04:51] 2024-06-22 19:04:35,685 | INFO     | *************************************
[2024-06-22 21:04:51] 2024-06-22 19:04:35,685 | INFO     | 
[2024-06-22 21:04:51] 2024-06-22 19:04:35,692 | INFO     | architecture information:
[2024-06-22 21:04:51] 2024-06-22 19:04:35,692 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:04:51] 2024-06-22 19:04:35,707 | INFO     | cat /etc/os-release:
[2024-06-22 21:04:51] NAME="CentOS Linux"
[2024-06-22 21:04:51] VERSION="7 (Core)"
[2024-06-22 21:04:51] ID="centos"
[2024-06-22 21:04:51] ID_LIKE="rhel fedora"
[2024-06-22 21:04:51] VERSION_ID="7"
[2024-06-22 21:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:04:51] ANSI_COLOR="0;31"
[2024-06-22 21:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:04:51] HOME_URL="https://www.centos.org/"
[2024-06-22 21:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:04:51] 
[2024-06-22 21:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:04:51] 
[2024-06-22 21:04:51] 2024-06-22 19:04:35,707 | INFO     | *************************************
[2024-06-22 21:04:51] 2024-06-22 19:04:36,210 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-06-22 21:04:51] 2024-06-22 19:04:36,230 | INFO     | sufficient remaining disk space (3176724955136 B)
[2024-06-22 21:04:51] 2024-06-22 19:04:36,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:04:51] 2024-06-22 19:04:36,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:04:51] 2024-06-22 19:04:36,238 | INFO     | all data control threads have been joined
[2024-06-22 21:04:51] 2024-06-22 19:04:36,338 | INFO     | all payload control threads have been joined
[2024-06-22 21:04:51] 2024-06-22 19:04:36,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:04:51] 2024-06-22 19:04:36,340 | INFO     | aborting loop
[2024-06-22 21:04:51] 2024-06-22 19:04:36,693 | INFO     | all job control threads have been joined
[2024-06-22 21:04:51] 2024-06-22 19:04:36,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:04:51] 2024-06-22 19:04:37,204 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:04:51] 2024-06-22 19:04:37,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:04:51] 2024-06-22 19:04:37,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:04:51] 2024-06-22 19:04:37,235 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,243 | INFO     | [data] control thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,335 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,341 | INFO     | [payload] control thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,345 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,551 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,699 | INFO     | [job] control thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:37,876 | INFO     | [job] validate thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,026 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,076 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,144 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,277 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:04:51] 2024-06-22 19:04:38,593 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:38,843 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:39,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:04:51] 2024-06-22 19:04:39,294 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:43,269 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:04:51] 2024-06-22 19:04:44,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47434687870016)>', '<ExcThread(monitor, started 47434885605120)>']
[2024-06-22 21:04:51] 2024-06-22 19:04:45,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:04:51] 2024-06-22 19:04:45,245 | INFO     | [monitor] control thread has ended
[2024-06-22 21:04:51] 2024-06-22 19:04:50,011 | INFO     | all workflow threads have been joined
[2024-06-22 21:04:51] 2024-06-22 19:04:50,011 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:04:51] 2024-06-22 19:04:50,011 | INFO     | traces error code: 0
[2024-06-22 21:04:51] 2024-06-22 19:04:50,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:04:51] 2024-06-22 19:04:50,111 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:04:51] 2024-06-22 19:04:50,113 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:04:51] 2024-06-22 19:04:50,115 [wrapper] pilotpid: 279461
[2024-06-22 21:04:51] 2024-06-22 19:04:50,118 [wrapper] Pilot exit status: 0
[2024-06-22 21:04:51] 2024-06-22 19:04:50,126 [wrapper] pandaids: 6241401057
[2024-06-22 21:04:51] 2024-06-22 19:04:50,217 [wrapper] cleanup supervisor_pilot  279466 279462
[2024-06-22 21:04:51] 2024-06-22 19:04:50,219 [wrapper] Test setup, not cleaning
[2024-06-22 21:04:51] 2024-06-22 19:04:50,222 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:04:51] 2024-06-22 19:04:50,224 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:04:51] 2024-06-22 19:04:50,229 [wrapper] apfmon messages muted
[2024-06-22 21:04:51]  *** Error codes and diagnostics ***
[2024-06-22 21:04:51]     "exeErrorCode": 65,
[2024-06-22 21:04:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 21:04:51]     "pilotErrorCode": 1305,
[2024-06-22 21:04:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 21:04:16,226 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 21:04:51]  *** Listing of results directory ***
[2024-06-22 21:04:51] total 616592
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc    469766 Jun 22 13:36 pilot3.tar.gz
[2024-06-22 21:04:51] -rwx------ 1 boinc boinc     32308 Jun 22 13:47 runpilot2-wrapper.sh
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc      5654 Jun 22 13:47 queuedata.json
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc       100 Jun 22 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:04:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 20:09 run_atlas
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc       105 Jun 22 20:09 job.xml
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc      6644 Jun 22 21:03 init_data.xml
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc 627683750 Jun 22 21:03 EVNT.38776160._000935.pool.root.1
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc     17537 Jun 22 21:03 start_atlas.sh
[2024-06-22 21:04:51] drwxrwx--x 2 boinc boinc      4096 Jun 22 21:03 shared
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc    482516 Jun 22 21:03 input.tar.gz
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc         0 Jun 22 21:03 boinc_lockfile
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc      2627 Jun 22 21:03 pandaJob.out
[2024-06-22 21:04:51] -rw------- 1 boinc boinc       424 Jun 22 21:03 setup.sh.local
[2024-06-22 21:04:51] -rw------- 1 boinc boinc   1025930 Jun 22 21:03 agis_schedconf.cvmfs.json
[2024-06-22 21:04:51] -rw------- 1 boinc boinc         0 Jun 22 21:03 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:04:51] -rw------- 1 boinc boinc   1321363 Jun 22 21:03 cric_ddmendpoints.json
[2024-06-22 21:04:51] -rw------- 1 boinc boinc        94 Jun 22 21:03 pilot_heartbeat.json
[2024-06-22 21:04:51] drwx------ 4 boinc boinc      4096 Jun 22 21:03 pilot3
[2024-06-22 21:04:51] -rw------- 1 boinc boinc       954 Jun 22 21:04 memory_monitor_summary.json
[2024-06-22 21:04:51] -rw------- 1 boinc boinc     20412 Jun 22 21:04 log.38920982._072020.job.log.tgz.1
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc       524 Jun 22 21:04 boinc_task_state.xml
[2024-06-22 21:04:51] -rw------- 1 boinc boinc      8328 Jun 22 21:04 heartbeat.json
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc      8192 Jun 22 21:04 boinc_mmap_file
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc        21 Jun 22 21:04 wrapper_checkpoint.txt
[2024-06-22 21:04:51] -rw------- 1 boinc boinc      4223 Jun 22 21:04 pilotlog.txt
[2024-06-22 21:04:51] -rw------- 1 boinc boinc     67230 Jun 22 21:04 log.38920982._072020.job.log.1
[2024-06-22 21:04:51] -rw------- 1 boinc boinc       188 Jun 22 21:04 output.list
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc       620 Jun 22 21:04 runtime_log
[2024-06-22 21:04:51] -rw------- 1 boinc boinc    102400 Jun 22 21:04 result.tar.gz
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc     11274 Jun 22 21:04 runtime_log.err
[2024-06-22 21:04:51] -rw------- 1 boinc boinc       633 Jun 22 21:04 HrgNDm7NEf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmrdYKDmry8Slm.diag
[2024-06-22 21:04:51] -rw-r--r-- 1 boinc boinc     21387 Jun 22 21:04 stderr.txt
[2024-06-22 21:04:51] No HITS result produced
[2024-06-22 21:04:51]  *** Contents of shared directory: ***
[2024-06-22 21:04:51] total 613572
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc 627683750 Jun 22 21:03 ATLAS.root_0
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc     17537 Jun 22 21:03 start_atlas.sh
[2024-06-22 21:04:51] -rw-r--r-- 2 boinc boinc    482516 Jun 22 21:03 input.tar.gz
[2024-06-22 21:04:51] -rw------- 1 boinc boinc    102400 Jun 22 21:04 result.tar.gz
21:04:52 (274894): run_atlas exited; CPU time 21.579906
21:04:52 (274894): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN