Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-23 07:49:01 (540480): Detected: vboxwrapper 26206
2024-06-23 07:49:01 (540480): Detected: BOINC client v8.0.2
2024-06-23 07:49:01 (540480): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-23 07:49:01 (540480): Successfully copied 'init_data.xml' to the shared directory.
2024-06-23 07:49:01 (540480): Create VM. (boinc_1943b000bb1d5cce, slot#0)
2024-06-23 07:49:02 (540480): Setting Memory Size for VM. (4600MB)
2024-06-23 07:49:02 (540480): Setting CPU Count for VM. (6)
2024-06-23 07:49:02 (540480): Setting Chipset Options for VM.
2024-06-23 07:49:02 (540480): Setting Graphics Controller Options for VM.
2024-06-23 07:49:02 (540480): Setting Boot Options for VM.
2024-06-23 07:49:02 (540480): Setting Network Configuration for NAT.
2024-06-23 07:49:03 (540480): Enabling VM Network Access.
2024-06-23 07:49:03 (540480): Disabling USB Support for VM.
2024-06-23 07:49:03 (540480): Disabling COM Port Support for VM.
2024-06-23 07:49:03 (540480): Disabling LPT Port Support for VM.
2024-06-23 07:49:03 (540480): Disabling Audio Support for VM.
2024-06-23 07:49:03 (540480): Disabling Clipboard Support for VM.
2024-06-23 07:49:04 (540480): Disabling Drag and Drop Support for VM.
2024-06-23 07:49:04 (540480): Adding storage controller(s) to VM.
2024-06-23 07:49:04 (540480): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-23 07:49:06 (540480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-23 07:49:06 (540480): forwarding host port 40471 to guest port 80
2024-06-23 07:49:06 (540480): Enabling remote desktop for VM.
2024-06-23 07:49:06 (540480): Required extension pack not installed, remote desktop not enabled.
2024-06-23 07:49:06 (540480): Enabling shared directory for VM.
2024-06-23 07:49:07 (540480): Starting VM using VBoxManage interface. (boinc_1943b000bb1d5cce, slot#0)
2024-06-23 07:49:08 (540480): Successfully started VM. (PID = '540734')
2024-06-23 07:49:08 (540480): Reporting VM Process ID to BOINC.
2024-06-23 07:49:08 (540480): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-23 07:49:08 (540480): Guest Log: CPUID EDX: 0x178bfbff
2024-06-23 07:49:08 (540480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-23 07:49:08 (540480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-23 07:49:08 (540480): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-23 07:49:08 (540480): Detected: Web Application Enabled (http://localhost:40471)
2024-06-23 07:49:08 (540480): Preference change detected
2024-06-23 07:49:08 (540480): Setting CPU throttle for VM. (50%)
2024-06-23 07:49:08 (540480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-23 07:49:10 (540480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-23 07:49:10 (540480): Guest Log: BIOS: Booting from Hard Disk...
2024-06-23 07:49:16 (540480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-23 07:49:16 (540480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-23 07:49:16 (540480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-23 07:49:28 (540480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-23 07:49:28 (540480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-23 07:49:48 (540480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000138 main     Log opened 2024-06-23T05:49:46.910048000Z
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000228 main     OS Product: Linux
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000255 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000296 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000297 main     Process ID: 1329
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.000298 main     Package type: LINUX_64BITS_GENERIC
2024-06-23 07:49:48 (540480): Guest Log: 00:00:00.001684 main     5.2.32 r132073 started. Verbose level = 0
2024-06-23 07:49:49 (540480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-23 07:49:49 (540480): Guest Log: [INFO] Mounting shared directory
2024-06-23 07:49:49 (540480): Guest Log: [INFO] Checking for init_data.xml
2024-06-23 07:49:54 (540480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-23 07:49:54 (540480): Guest Log: [INFO] Detected branch: prod
2024-06-23 07:49:54 (540480): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-23 07:49:54 (540480): Guest Log: Copying input files
2024-06-23 07:50:03 (540480): Guest Log: Copied input files into RunAtlas.
2024-06-23 07:50:03 (540480): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-23 07:50:03 (540480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-23 07:50:03 (540480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-23 07:50:03 (540480): Guest Log: Further information can be found at the LHC@home message board.
2024-06-23 07:53:07 (540480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-23 07:53:08 (540480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-23 07:53:08 (540480): Guest Log: 2.6.3.0 1605 3 32284 134191 4 1 3117206 4096000 0 65024 0 0 n/a 2 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-06-23 07:53:11 (540480): Guest Log: copied the webapp to /var/www
2024-06-23 07:53:11 (540480): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-23 07:53:11 (540480): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-23 07:53:14 (540480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-23 07:53:14 (540480): Guest Log:  *** Starting ATLAS job. (PandaID=6241398924 taskID=38921013) ***
2024-06-23 09:28:09 (540480): Status Report: Elapsed Time: '6000.000000'
2024-06-23 09:28:09 (540480): Status Report: CPU Time: '10909.780000'
2024-06-23 11:07:09 (540480): Status Report: Elapsed Time: '12000.000000'
2024-06-23 11:07:09 (540480): Status Report: CPU Time: '29834.580000'
2024-06-23 12:46:10 (540480): Status Report: Elapsed Time: '18000.000000'
2024-06-23 12:46:10 (540480): Status Report: CPU Time: '48909.090000'
2024-06-23 14:25:10 (540480): Status Report: Elapsed Time: '24000.000000'
2024-06-23 14:25:10 (540480): Status Report: CPU Time: '67953.860000'
2024-06-23 16:04:11 (540480): Status Report: Elapsed Time: '30000.000000'
2024-06-23 16:04:11 (540480): Status Report: CPU Time: '86936.100000'
2024-06-23 17:43:11 (540480): Status Report: Elapsed Time: '36000.000000'
2024-06-23 17:43:11 (540480): Status Report: CPU Time: '105948.750000'
2024-06-23 19:22:12 (540480): Status Report: Elapsed Time: '42000.000000'
2024-06-23 19:22:12 (540480): Status Report: CPU Time: '124966.110000'
2024-06-23 21:01:12 (540480): Status Report: Elapsed Time: '48000.000000'
2024-06-23 21:01:12 (540480): Status Report: CPU Time: '143317.590000'
2024-06-23 21:05:29 (540480): Guest Log:  *** Job finished ***
2024-06-23 21:05:29 (540480): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:12,770 | INFO     | [data] queue_monitor thread has finished
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:17,997 | INFO     | job.realtimelogging is not enabled
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:18,999 | INFO     | [payload] run_realtimelog thread has finished
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:20,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471118034752)>', '<ExcThread(monitor, started 140470369896192)>']
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:21,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:21,228 | INFO     | [monitor] control thread has ended
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,499 | INFO     | all workflow threads have been joined
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,499 | INFO     | end of generic workflow (traces error code: 0)
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,500 | INFO     | traces error code: 0
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,621 [wrapper] ==== pilot stdout END ====
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,629 [wrapper] ==== wrapper stdout RESUME ====
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,636 [wrapper] pilotpid: 6610
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,643 [wrapper] Pilot exit status: 0
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,750 [wrapper] pandaids: 6241398924
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,880 [wrapper] cleanup supervisor_pilot 21439 6611
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,887 [wrapper] Test setup, not cleaning
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,894 [wrapper] ==== wrapper stdout END ====
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,901 [wrapper] ==== wrapper stderr END ====
2024-06-23 21:05:29 (540480): Guest Log: 2024-06-23 19:05:25,915 [wrapper] apfmon messages muted
2024-06-23 21:05:29 (540480): Guest Log:  *** Error codes and diagnostics ***
2024-06-23 21:05:29 (540480): Guest Log:     "exeErrorCode": 0,
2024-06-23 21:05:29 (540480): Guest Log:     "exeErrorDiag": "",
2024-06-23 21:05:29 (540480): Guest Log:     "pilotErrorCode": 0,
2024-06-23 21:05:29 (540480): Guest Log:     "pilotErrorDiag": "",
2024-06-23 21:05:29 (540480): Guest Log:  *** Listing of results directory ***
2024-06-23 21:05:29 (540480): Guest Log: total 341220
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 22 11:36 pilot3.tar.gz
2024-06-23 21:05:29 (540480): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 22 11:42 runpilot2-wrapper.sh
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 22 11:42 queuedata.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas    482530 Jun 23 05:49 input.tar.gz
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas      6646 Jun 23 05:49 init_data.xml
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 23 05:49 start_atlas.sh
2024-06-23 21:05:29 (540480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 05:50 EVNT.38776210._000407.pool.root.1 -> /data/./ATLAS.root_0
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas      2644 Jun 23 05:53 pandaJob.out
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas       424 Jun 23 05:54 setup.sh.local
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas   1025270 Jun 23 06:00 agis_schedconf.cvmfs.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 23 06:00 cric_ddmendpoints.json
2024-06-23 21:05:29 (540480): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 06:01 pilot3
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas 337262896 Jun 23 19:01 HITS.38921013._053450.pool.root.1
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas      1030 Jun 23 19:02 memory_monitor_summary.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas         0 Jun 23 19:02 agis_ddmendpoints.agis.ALL.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas    560975 Jun 23 19:02 log.38921013._053450.job.log.tgz.1
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas        95 Jun 23 19:04 pilot_heartbeat.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas      7742 Jun 23 19:05 heartbeat.json
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas      4529 Jun 23 19:05 pilotlog.txt
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas   3783617 Jun 23 19:05 log.38921013._053450.job.log.1
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas       357 Jun 23 19:05 output.list
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 23 19:05 runtime_log
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas   4362240 Jun 23 19:05 result.tar.gz
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 atlas atlas     11015 Jun 23 19:05 runtime_log.err
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas       676 Jun 23 19:05 GgIMDmtJEf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmmdYKDmgoH0en.diag
2024-06-23 21:05:29 (540480): Guest Log: Looking for outputfile HITS.38921013._053450.pool.root.1
2024-06-23 21:05:29 (540480): Guest Log: HITS file was successfully produced
2024-06-23 21:05:29 (540480): Guest Log: -rw-------. 1 atlas atlas 337262896 Jun 23 19:01 /home/atlas/RunAtlas/HITS.38921013._053450.pool.root.1
2024-06-23 21:05:29 (540480): Guest Log: Successfully finished the ATLAS job!
2024-06-23 21:05:29 (540480): Guest Log: Copying the results back to the shared directory!
2024-06-23 21:05:29 (540480): Guest Log:  *** Contents of shared directory: ***
2024-06-23 21:05:29 (540480): Guest Log: total 533140
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 root root 541056128 Jun 23 05:49 ATLAS.root_0
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 root root      6646 Jun 23 05:49 init_data.xml
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 root root    482530 Jun 23 05:49 input.tar.gz
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 root root   4362240 Jun 23 19:05 result.tar.gz
2024-06-23 21:05:29 (540480): Guest Log: -rw-r--r--. 1 root root     17537 Jun 23 05:49 start_atlas.sh
2024-06-23 21:05:29 (540480): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-23 21:05:29 (540480): VM Completion File Detected.
2024-06-23 21:05:29 (540480): Powering off VM.
2024-06-23 21:05:29 (540480): Successfully stopped VM.
2024-06-23 21:05:29 (540480): Deregistering VM. (boinc_1943b000bb1d5cce, slot#0)
2024-06-23 21:05:29 (540480): Removing network bandwidth throttle group from VM.
2024-06-23 21:05:29 (540480): Removing VM from VirtualBox.
21:05:35 (540480): called boinc_finish(0)

</stderr_txt>
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