Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 16:18:55 (6596): Detected: vboxwrapper 26206
2024-06-22 16:18:55 (6596): Detected: BOINC client v8.0.2
2024-06-22 16:18:55 (6596): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-22 16:18:56 (6596): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 16:18:56 (6596): Create VM. (boinc_97bfe4ab0bbf0fb6, slot#23)
2024-06-22 16:18:57 (6596): Setting Memory Size for VM. (4096MB)
2024-06-22 16:18:57 (6596): Setting CPU Count for VM. (1)
2024-06-22 16:18:57 (6596): Setting Chipset Options for VM.
2024-06-22 16:18:58 (6596): Setting Graphics Controller Options for VM.
2024-06-22 16:18:58 (6596): Setting Boot Options for VM.
2024-06-22 16:18:58 (6596): Setting Network Configuration for NAT.
2024-06-22 16:18:58 (6596): Enabling VM Network Access.
2024-06-22 16:18:59 (6596): Disabling USB Support for VM.
2024-06-22 16:18:59 (6596): Disabling COM Port Support for VM.
2024-06-22 16:18:59 (6596): Disabling LPT Port Support for VM.
2024-06-22 16:18:59 (6596): Disabling Audio Support for VM.
2024-06-22 16:19:00 (6596): Disabling Clipboard Support for VM.
2024-06-22 16:19:00 (6596): Disabling Drag and Drop Support for VM.
2024-06-22 16:19:00 (6596): Adding storage controller(s) to VM.
2024-06-22 16:19:00 (6596): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 16:19:01 (6596): Adding VirtualBox Guest Additions to VM.
2024-06-22 16:19:01 (6596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 16:19:02 (6596): forwarding host port 64085 to guest port 80
2024-06-22 16:19:02 (6596): Enabling remote desktop for VM.
2024-06-22 16:19:02 (6596): Enabling shared directory for VM.
2024-06-22 16:19:03 (6596): Starting VM using VBoxManage interface. (boinc_97bfe4ab0bbf0fb6, slot#23)
2024-06-22 16:19:07 (6596): Successfully started VM. (PID = '4436')
2024-06-22 16:19:07 (6596): Reporting VM Process ID to BOINC.
2024-06-22 16:19:07 (6596): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-22 16:19:07 (6596): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 16:19:07 (6596): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 16:19:07 (6596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 16:19:07 (6596): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 16:19:07 (6596): Detected: Web Application Enabled (http://localhost:64085)
2024-06-22 16:19:07 (6596): Detected: Remote Desktop Enabled (localhost:64086)
2024-06-22 16:19:07 (6596): Preference change detected
2024-06-22 16:19:07 (6596): Setting CPU throttle for VM. (100%)
2024-06-22 16:19:08 (6596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 16:19:09 (6596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 16:19:09 (6596): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 16:19:11 (6596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 16:19:11 (6596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 16:19:11 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 16:19:12 (6596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 16:19:15 (6596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 16:19:15 (6596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 16:19:19 (6596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000080 main     Log opened 2024-06-22T16:19:17.609956000Z
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000163 main     OS Product: Linux
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000187 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000205 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000224 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000225 main     Process ID: 1236
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000225 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 16:19:19 (6596): Guest Log: 00:00:00.000934 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 16:19:19 (6596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 16:19:19 (6596): Guest Log: [INFO] Mounting shared directory
2024-06-22 16:19:19 (6596): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 16:19:23 (6596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 16:19:23 (6596): Guest Log: [INFO] Detected branch: prod
2024-06-22 16:19:24 (6596): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 16:19:24 (6596): Guest Log: Copying input files
2024-06-22 16:19:26 (6596): Guest Log: Copied input files into RunAtlas.
2024-06-22 16:19:26 (6596): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2024-06-22 16:19:29 (6596): Guest Log: 00:00:10.013817 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 924 311 000ns (GuestNow=1 719 065 969 699 169 000 ns GuestLast=1 719 073 157 623 480 000 ns fSetTimeLastLoop=true )
2024-06-22 16:19:37 (6596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 16:19:37 (6596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 16:19:37 (6596): Guest Log: 2.6.3.0 1505 0 29500 134169 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2024-06-22 16:19:37 (6596): Guest Log: copied the webapp to /var/www
2024-06-22 16:19:37 (6596): Guest Log: core_number=1
2024-06-22 16:19:37 (6596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 16:19:37 (6596): Guest Log:  *** Starting ATLAS job. (PandaID=6241382964 taskID=38920995) ***
2024-06-22 17:59:10 (6596): Status Report: Elapsed Time: '6000.000000'
2024-06-22 17:59:10 (6596): Status Report: CPU Time: '5123.703125'
2024-06-22 19:39:13 (6596): Status Report: Elapsed Time: '12000.000000'
2024-06-22 19:39:13 (6596): Status Report: CPU Time: '11110.015625'
2024-06-22 21:19:15 (6596): Status Report: Elapsed Time: '18000.000000'
2024-06-22 21:19:15 (6596): Status Report: CPU Time: '17100.796875'
2024-06-22 22:59:18 (6596): Status Report: Elapsed Time: '24000.000000'
2024-06-22 22:59:18 (6596): Status Report: CPU Time: '23091.187500'
2024-06-23 00:39:20 (6596): Status Report: Elapsed Time: '30000.000000'
2024-06-23 00:39:20 (6596): Status Report: CPU Time: '29084.484375'
2024-06-23 02:19:22 (6596): Status Report: Elapsed Time: '36000.000000'
2024-06-23 02:19:22 (6596): Status Report: CPU Time: '35077.953125'
2024-06-23 03:59:25 (6596): Status Report: Elapsed Time: '42000.000000'
2024-06-23 03:59:25 (6596): Status Report: CPU Time: '41072.203125'
2024-06-23 05:39:27 (6596): Status Report: Elapsed Time: '48000.000000'
2024-06-23 05:39:27 (6596): Status Report: CPU Time: '47066.796875'
2024-06-23 07:19:30 (6596): Status Report: Elapsed Time: '54000.000000'
2024-06-23 07:19:30 (6596): Status Report: CPU Time: '53060.828125'
2024-06-23 08:59:32 (6596): Status Report: Elapsed Time: '60000.000000'
2024-06-23 08:59:32 (6596): Status Report: CPU Time: '59052.968750'
2024-06-23 10:39:35 (6596): Status Report: Elapsed Time: '66000.000000'
2024-06-23 10:39:35 (6596): Status Report: CPU Time: '65047.406250'
2024-06-23 12:01:43 (6596): Guest Log:  *** Job finished ***
2024-06-23 12:01:43 (6596): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:12,057 | INFO     | [payload] run_realtimelog thread has finished
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:12,851 | INFO     | [job] queue monitor thread has finished
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:15,785 | INFO     | [data] queue_monitor thread has finished
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:16,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163475654464)>', '<ExcThread(monitor, started 140162893866752)>']
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:17,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:17,227 | INFO     | [monitor] control thread has ended
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,697 | INFO     | all workflow threads have been joined
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,697 | INFO     | end of generic workflow (traces error code: 0)
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,698 | INFO     | traces error code: 0
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,776 [wrapper] ==== pilot stdout END ====
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,777 [wrapper] ==== wrapper stdout RESUME ====
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,779 [wrapper] pilotpid: 6311
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,781 [wrapper] Pilot exit status: 0
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,829 [wrapper] pandaids: 6241382964
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,838 [wrapper] cleanup supervisor_pilot 19031 6312
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,840 [wrapper] Test setup, not cleaning
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,841 [wrapper] ==== wrapper stdout END ====
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,842 [wrapper] ==== wrapper stderr END ====
2024-06-23 12:01:43 (6596): Guest Log: 2024-06-23 10:01:21,845 [wrapper] apfmon messages muted
2024-06-23 12:01:43 (6596): Guest Log:  *** Error codes and diagnostics ***
2024-06-23 12:01:43 (6596): Guest Log:     "exeErrorCode": 0,
2024-06-23 12:01:43 (6596): Guest Log:     "exeErrorDiag": "",
2024-06-23 12:01:43 (6596): Guest Log:     "pilotErrorCode": 0,
2024-06-23 12:01:43 (6596): Guest Log:     "pilotErrorDiag": "",
2024-06-23 12:01:43 (6596): Guest Log:  *** Listing of results directory ***
2024-06-23 12:01:43 (6596): Guest Log: total 367552
2024-06-23 12:01:43 (6596): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 22 10:59 pilot3.tar.gz
2024-06-23 12:01:43 (6596): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 22 11:15 runpilot2-wrapper.sh
2024-06-23 12:01:43 (6596): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 22 11:15 queuedata.json
2024-06-23 12:01:43 (6596): Guest Log: -rwxr-xr-x. 1 atlas atlas      9303 Jun 22 14:19 init_data.xml
2024-06-23 12:01:43 (6596): Guest Log: -rwxr-xr-x. 1 atlas atlas    482532 Jun 22 14:19 input.tar.gz
2024-06-23 12:01:43 (6596): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 22 14:19 start_atlas.sh
2024-06-23 12:01:43 (6596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 14:19 EVNT.38776180._000826.pool.root.1 -> /data/./ATLAS.root_0
2024-06-23 12:01:43 (6596): Guest Log: -rw-r--r--. 1 atlas atlas      2616 Jun 22 14:19 pandaJob.out
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas       460 Jun 22 14:19 setup.sh.local
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas   1025922 Jun 22 14:19 agis_schedconf.cvmfs.json
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 14:19 cric_ddmendpoints.json
2024-06-23 12:01:43 (6596): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 14:19 pilot3
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas 350379659 Jun 23 10:00 HITS.38920995._057947.pool.root.1
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas      1021 Jun 23 10:00 memory_monitor_summary.json
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas         0 Jun 23 10:00 agis_ddmendpoints.agis.ALL.json
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas    976065 Jun 23 10:00 log.38920995._057947.job.log.tgz.1
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas      7701 Jun 23 10:01 heartbeat.json
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas        95 Jun 23 10:01 pilot_heartbeat.json
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 23 10:01 pilotlog.txt
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas  10284964 Jun 23 10:01 log.38920995._057947.job.log.1
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas       357 Jun 23 10:01 output.list
2024-06-23 12:01:43 (6596): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 23 10:01 runtime_log
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas  11284480 Jun 23 10:01 result.tar.gz
2024-06-23 12:01:43 (6596): Guest Log: -rw-r--r--. 1 atlas atlas     11170 Jun 23 10:01 runtime_log.err
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas       647 Jun 23 10:01 epxNDmdtDf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmXdYKDm9roNCo.diag
2024-06-23 12:01:43 (6596): Guest Log: Looking for outputfile HITS.38920995._057947.pool.root.1
2024-06-23 12:01:43 (6596): Guest Log: HITS file was successfully produced
2024-06-23 12:01:43 (6596): Guest Log: -rw-------. 1 atlas atlas 350379659 Jun 23 10:00 /home/atlas/RunAtlas/HITS.38920995._057947.pool.root.1
2024-06-23 12:01:44 (6596): Guest Log: Successfully finished the ATLAS job!
2024-06-23 12:01:44 (6596): Guest Log: Copying the results back to the shared directory!
2024-06-23 12:01:44 (6596): Guest Log:  *** Contents of shared directory: ***
2024-06-23 12:01:44 (6596): Guest Log: total 972180
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root 633328846 Jun 22 14:18 ATLAS.root_0
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root 350379659 Jun 23  2024 HITS.pool.root.1
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root      9303 Jun 22 14:18 init_data.xml
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root    482532 Jun 22 14:17 input.tar.gz
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root  11284480 Jun 23  2024 result.tar.gz
2024-06-23 12:01:44 (6596): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 22 14:17 start_atlas.sh
2024-06-23 12:01:44 (6596): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-23 12:01:44 (6596): VM Completion File Detected.
2024-06-23 12:01:44 (6596): Powering off VM.
2024-06-23 12:01:44 (6596): Successfully stopped VM.
2024-06-23 12:01:44 (6596): Deregistering VM. (boinc_97bfe4ab0bbf0fb6, slot#23)
2024-06-23 12:01:44 (6596): Removing network bandwidth throttle group from VM.
2024-06-23 12:01:45 (6596): Removing VM from VirtualBox.
12:01:50 (6596): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN