Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:53 (650419): wrapper (7.7.26015): starting
10:08:53 (650419): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 10:08:53] Arguments: --nthreads 8
[2024-06-22 10:08:53] Threads: 8
[2024-06-22 10:08:53] Checking for CVMFS
[2024-06-22 10:08:54] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 10:08:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 10:08:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 10:08:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 10:08:57] 2.11.2.0 2197843 13953 76392 134167 3 56 11929386 18432000 4577 130560 2 44832975 99.987 2947968 24509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-06-22 10:08:57] CVMFS is ok
[2024-06-22 10:08:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 10:08:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 10:08:57] Further information can be found at the LHC@home message board.
[2024-06-22 10:08:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 10:08:57] Checking for apptainer binary...
[2024-06-22 10:08:57] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 10:08:57] Running /usr/bin/apptainer --version
[2024-06-22 10:08:57] apptainer version 1.2.4-1.el7
[2024-06-22 10:08:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 10:08:59] gc-9-36.aglt2.org
[2024-06-22 10:08:59] apptainer works
[2024-06-22 10:08:59] Set ATHENA_PROC_NUMBER=8
[2024-06-22 10:08:59] Set ATHENA_CORE_NUMBER=8
[2024-06-22 10:08:59] Starting ATLAS job with PandaID=6241362618
[2024-06-22 10:08:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 14:07:43]  *** The last 200 lines of the pilot log: ***
[2024-06-22 14:07:43] 2024-06-22 18:07:24,844 | INFO     | intersect: -76523805267.47229
[2024-06-22 14:07:43] 2024-06-22 18:07:24,845 | INFO     | chi2: 8.860702039640376
[2024-06-22 14:07:43] 2024-06-22 18:07:24,845 | INFO     | model: linear, x: [1719065653.0, 1719065714.0, 1719065775.0, 1719065836.0, 1719065897.0, 1719065958.0, 1719066019.0, 1719066080.0, 1719066141.0, 1719066202.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,845 | INFO     | sum of square deviations: 3485082332.995535
[2024-06-22 14:07:43] 2024-06-22 18:07:24,846 | INFO     | sum of deviations: 177661762788.83463
[2024-06-22 14:07:43] 2024-06-22 18:07:24,846 | INFO     | mean x: 1719072454.5669644
[2024-06-22 14:07:43] 2024-06-22 18:07:24,846 | INFO     | mean y: 2434103.9776785714
[2024-06-22 14:07:43] 2024-06-22 18:07:24,846 | INFO     | -- intersect: -87632064441.02042
[2024-06-22 14:07:43] 2024-06-22 18:07:24,846 | INFO     | intersect: -87632064441.02042
[2024-06-22 14:07:43] 2024-06-22 18:07:24,847 | INFO     | chi2: 8.08743244159483
[2024-06-22 14:07:43] 2024-06-22 18:07:24,847 | INFO     | current chi2=8.08743244159483 (change=8.726956335808925 %)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,847 | INFO     | right removable region: 223
[2024-06-22 14:07:43] 2024-06-22 18:07:24,847 | INFO     | model: linear, x: [1719065958.0, 1719066019.0, 1719066080.0, 1719066141.0, 1719066202.0, 1719066263.0, 1719066324.0, 1719066385.0, 1719066446.0, 1719066507.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,847 | INFO     | sum of square deviations: 3485073182.995535
[2024-06-22 14:07:43] 2024-06-22 18:07:24,848 | INFO     | sum of deviations: 89482575702.81244
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | mean x: 1719072759.5669644
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | mean y: 2475382.8125
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | -- intersect: -44136356219.67746
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | intersect: -44136356219.67746
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | chi2: 4.257489486299288
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | current chi2=4.257489486299288 (change=51.950878527994334 %)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | model: linear, x: [1719066263.0, 1719066324.0, 1719066385.0, 1719066446.0, 1719066507.0, 1719066568.0, 1719066629.0, 1719066690.0, 1719066751.0, 1719066812.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,849 | INFO     | sum of square deviations: 3256859677.9726057
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | sum of deviations: 34476757272.904144
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | mean x: 1719072912.0684931
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | mean y: 2512134.7397260275
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | -- intersect: -18195404074.13553
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | intersect: -18195404074.13553
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | chi2: 2.0674215039653987
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | current chi2=2.0674215039653987 (change=51.440361494293406 %)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,851 | INFO     | model: linear, x: [1719066568.0, 1719066629.0, 1719066690.0, 1719066751.0, 1719066812.0, 1719066873.0, 1719066934.0, 1719066995.0, 1719067056.0, 1719067117.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,852 | INFO     | sum of square deviations: 3038832410.4485993
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | sum of deviations: -2726718701.514019
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | mean x: 1719073064.5700934
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | mean y: 2538054.7009345796
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | -- intersect: 1545047822.0428991
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | intersect: 1545047822.0428991
[2024-06-22 14:07:43] 2024-06-22 18:07:24,853 | INFO     | chi2: 0.9818840666965041
[2024-06-22 14:07:43] 2024-06-22 18:07:24,854 | INFO     | current chi2=0.9818840666965041 (change=52.50682723318828 %)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,854 | INFO     | model: linear, x: [1719066873.0, 1719066934.0, 1719066995.0, 1719067056.0, 1719067117.0, 1719067178.0, 1719067239.0, 1719067300.0, 1719067361.0, 1719067422.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,854 | INFO     | sum of square deviations: 2830758817.9234476
[2024-06-22 14:07:43] 2024-06-22 18:07:24,855 | INFO     | sum of deviations: -15572360251.119614
[2024-06-22 14:07:43] 2024-06-22 18:07:24,855 | INFO     | mean x: 1719073217.0717704
[2024-06-22 14:07:43] 2024-06-22 18:07:24,855 | INFO     | mean y: 2547459.674641148
[2024-06-22 14:07:43] 2024-06-22 18:07:24,855 | INFO     | -- intersect: 9459385415.912247
[2024-06-22 14:07:43] 2024-06-22 18:07:24,855 | INFO     | intersect: 9459385415.912247
[2024-06-22 14:07:43] 2024-06-22 18:07:24,856 | INFO     | chi2: 0.8570659195742598
[2024-06-22 14:07:43] 2024-06-22 18:07:24,856 | INFO     | current chi2=0.8570659195742598 (change=12.712106383616975 %)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,856 | INFO     | left removable region: 40
[2024-06-22 14:07:43] 2024-06-22 18:07:24,856 | INFO     | model: linear, x: [1719068093.0, 1719068154.0, 1719068215.0, 1719068276.0, 1719068337.0, 1719068398.0, 1719068459.0, 1719068521.0, 1719068581.0, 1719068642.0, 1719
[2024-06-22 14:07:43] 2024-06-22 18:07:24,856 | INFO     | sum of square deviations: 1900255178.9289653
[2024-06-22 14:07:43] 2024-06-22 18:07:24,857 | INFO     | sum of deviations: -3634835856.1256833
[2024-06-22 14:07:43] 2024-06-22 18:07:24,857 | INFO     | mean x: 1719073644.0765028
[2024-06-22 14:07:43] 2024-06-22 18:07:24,857 | INFO     | mean y: 2560797.3661202188
[2024-06-22 14:07:43] 2024-06-22 18:07:24,857 | INFO     | -- intersect: 3290829967.789728
[2024-06-22 14:07:43] 2024-06-22 18:07:24,858 | INFO     | intersect: 3290829967.789728
[2024-06-22 14:07:43] 2024-06-22 18:07:24,858 | INFO     | chi2: 0.005249631585067506
[2024-06-22 14:07:43] 2024-06-22 18:07:24,858 | INFO     | -- intersect: 3290829967.789728
[2024-06-22 14:07:43] 2024-06-22 18:07:24,858 | INFO     | current memory leak: -1.91 B/s (using 183 data points, chi2=0.01)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,858 | INFO     | ..............................
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . Timing measurements:
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . get job = 0 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . initial setup = 3 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . payload setup = 77 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . stage-in = 0 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . payload execution = 13979 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . stage-out = 2 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | . log creation = 0 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,859 | INFO     | ..............................
[2024-06-22 14:07:43] 2024-06-22 18:07:24,990 | INFO     | 
[2024-06-22 14:07:43] 2024-06-22 18:07:24,990 | INFO     | job summary report
[2024-06-22 14:07:43] 2024-06-22 18:07:24,990 | INFO     | --------------------------------------------------
[2024-06-22 14:07:43] 2024-06-22 18:07:24,990 | INFO     | PanDA job id: 6241362618
[2024-06-22 14:07:43] 2024-06-22 18:07:24,990 | INFO     | task id: 40024023
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | errors: (none)
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | pilot state: finished 
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | transexitcode: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | exeerrorcode: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | exeerrordiag: 
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | exitcode: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | exitmsg: OK
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | cpuconsumptiontime: 54140 s
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | nevents: 400
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | neventsw: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | pid: 674393
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | pgrp: 674393
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | corecount: 8
[2024-06-22 14:07:43] 2024-06-22 18:07:24,991 | INFO     | event service: False
[2024-06-22 14:07:43] 2024-06-22 18:07:24,992 | INFO     | sizes: {0: 2386682, 1: 2386881, 12: 2386881, 23: 2386909, 34: 2386937, 43: 2387171, 45: 2387327, 14061: 2417563, 14064: 2426525, 14066: 2426581, 14106: 2426751}
[2024-06-22 14:07:43] 2024-06-22 18:07:24,992 | INFO     | --------------------------------------------------
[2024-06-22 14:07:43] 2024-06-22 18:07:24,992 | INFO     | 
[2024-06-22 14:07:43] 2024-06-22 18:07:24,992 | INFO     | executing command: ls -lF /data/boinchome/slots/1
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,276 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 14:07:43] 2024-06-22 18:07:25,277 | INFO     | job 6241362618 has completed (purged errors)
[2024-06-22 14:07:43] 2024-06-22 18:07:25,277 | INFO     | overall cleanup function is called
[2024-06-22 14:07:43] 2024-06-22 18:07:26,291 | INFO     | --- collectZombieJob: --- 10, [674393]
[2024-06-22 14:07:43] 2024-06-22 18:07:26,291 | INFO     | zombie collector waiting for pid 674393
[2024-06-22 14:07:43] 2024-06-22 18:07:26,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 14:07:43] 2024-06-22 18:07:27,298 | INFO     | collected zombie processes
[2024-06-22 14:07:43] 2024-06-22 18:07:27,298 | INFO     | will now attempt to kill all subprocesses of pid=674393
[2024-06-22 14:07:43] 2024-06-22 18:07:27,679 | INFO     | process IDs to be killed: [674393] (in reverse order)
[2024-06-22 14:07:43] 2024-06-22 18:07:27,885 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 14:07:43] 2024-06-22 18:07:27,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 14:07:43] 2024-06-22 18:07:27,891 | INFO     | did not find any defunct processes belonging to 674393
[2024-06-22 14:07:43] 2024-06-22 18:07:27,896 | INFO     | did not find any defunct processes belonging to 674393
[2024-06-22 14:07:43] 2024-06-22 18:07:27,897 | INFO     | ready for new job
[2024-06-22 14:07:43] 2024-06-22 18:07:27,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 14:07:43] 2024-06-22 18:07:27,898 | INFO     | *************************************
[2024-06-22 14:07:43] 2024-06-22 18:07:27,898 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 14:07:43] 2024-06-22 18:07:27,899 | INFO     | *************************************
[2024-06-22 14:07:43] 2024-06-22 18:07:27,899 | INFO     | 
[2024-06-22 14:07:43] 2024-06-22 18:07:27,901 | INFO     | architecture information:
[2024-06-22 14:07:43] 2024-06-22 18:07:27,909 | INFO     | executing command: cat /etc/os-release
[2024-06-22 14:07:43] 2024-06-22 18:07:27,975 | INFO     | cat /etc/os-release:
[2024-06-22 14:07:43] NAME="CentOS Linux"
[2024-06-22 14:07:43] VERSION="7 (Core)"
[2024-06-22 14:07:43] ID="centos"
[2024-06-22 14:07:43] ID_LIKE="rhel fedora"
[2024-06-22 14:07:43] VERSION_ID="7"
[2024-06-22 14:07:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 14:07:43] ANSI_COLOR="0;31"
[2024-06-22 14:07:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 14:07:43] HOME_URL="https://www.centos.org/"
[2024-06-22 14:07:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 14:07:43] 
[2024-06-22 14:07:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 14:07:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 14:07:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 14:07:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 14:07:43] 
[2024-06-22 14:07:43] 2024-06-22 18:07:27,976 | INFO     | *************************************
[2024-06-22 14:07:43] 2024-06-22 18:07:28,479 | INFO     | executing command: df -mP /data/boinchome/slots/1
[2024-06-22 14:07:43] 2024-06-22 18:07:28,656 | INFO     | sufficient remaining disk space (906002169856 B)
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | INFO     | aborting loop
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 14:07:43] 2024-06-22 18:07:28,657 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 14:07:43] 2024-06-22 18:07:28,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 14:07:43] 2024-06-22 18:07:28,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 14:07:43] 2024-06-22 18:07:29,176 | INFO     | all payload control threads have been joined
[2024-06-22 14:07:43] 2024-06-22 18:07:29,257 | INFO     | all job control threads have been joined
[2024-06-22 14:07:43] 2024-06-22 18:07:29,571 | INFO     | all data control threads have been joined
[2024-06-22 14:07:43] 2024-06-22 18:07:29,663 | INFO     | [job] retrieve thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:29,667 | INFO     | [job] job monitor thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:29,719 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:29,840 | INFO     | [payload] failed_post thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:29,958 | INFO     | [job] validate thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:07:43] 2024-06-22 18:07:30,090 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,182 | INFO     | [payload] control thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,263 | INFO     | [job] control thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,370 | INFO     | [payload] validate_post thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,577 | INFO     | [data] control thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,644 | INFO     | [data] copytool_in thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:30,664 | INFO     | [data] copytool_out thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:31,011 | INFO     | [job] queue monitor thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:31,060 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:31,139 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:31,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 14:07:43] 2024-06-22 18:07:35,790 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 14:07:43] 2024-06-22 18:07:36,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370163611456)>', '<ExcThread(monitor, started 140369589167872)>']
[2024-06-22 14:07:43] 2024-06-22 18:07:36,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 14:07:43] 2024-06-22 18:07:36,712 | INFO     | [monitor] control thread has ended
[2024-06-22 14:07:43] 2024-06-22 18:07:41,135 | INFO     | all workflow threads have been joined
[2024-06-22 14:07:43] 2024-06-22 18:07:41,135 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 14:07:43] 2024-06-22 18:07:41,135 | INFO     | traces error code: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:41,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 14:07:43] 2024-06-22 18:07:41,840 [wrapper] ==== pilot stdout END ====
[2024-06-22 14:07:43] 2024-06-22 18:07:41,883 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 14:07:43] 2024-06-22 18:07:41,911 [wrapper] pilotpid: 660686
[2024-06-22 14:07:43] 2024-06-22 18:07:41,941 [wrapper] Pilot exit status: 0
[2024-06-22 14:07:43] 2024-06-22 18:07:42,062 [wrapper] pandaids: 6241362618
[2024-06-22 14:07:43] 2024-06-22 18:07:42,214 [wrapper] cleanup supervisor_pilot 1471802 660687
[2024-06-22 14:07:43] 2024-06-22 18:07:42,246 [wrapper] Test setup, not cleaning
[2024-06-22 14:07:43] 2024-06-22 18:07:42,283 [wrapper] ==== wrapper stdout END ====
[2024-06-22 14:07:43] 2024-06-22 18:07:42,306 [wrapper] ==== wrapper stderr END ====
[2024-06-22 14:07:43] 2024-06-22 18:07:42,360 [wrapper] apfmon messages muted
[2024-06-22 14:07:43]  *** Error codes and diagnostics ***
[2024-06-22 14:07:43]     "exeErrorCode": 0,
[2024-06-22 14:07:43]     "exeErrorDiag": "",
[2024-06-22 14:07:43]     "pilotErrorCode": 0,
[2024-06-22 14:07:43]     "pilotErrorDiag": "",
[2024-06-22 14:07:43]  *** Listing of results directory ***
[2024-06-22 14:07:43] total 848272
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas    469766 Jun 22 06:30 pilot3.tar.gz
[2024-06-22 14:07:43] -rwx------ 1 boincer umatlas     32308 Jun 22 06:31 runpilot2-wrapper.sh
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas      5654 Jun 22 06:31 queuedata.json
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas       100 Jun 22 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 14:07:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 10:08 run_atlas
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas       105 Jun 22 10:08 job.xml
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas 599488580 Jun 22 10:08 EVNT.40024021._000016.pool.root.1
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 10:08 start_atlas.sh
[2024-06-22 14:07:43] drwxrwx--x 2 boincer umatlas      4096 Jun 22 10:08 shared
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas    482490 Jun 22 10:08 input.tar.gz
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas         0 Jun 22 10:08 boinc_lockfile
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas      2517 Jun 22 10:08 pandaJob.out
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas       461 Jun 22 10:09 setup.sh.local
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas   1025930 Jun 22 10:10 agis_schedconf.cvmfs.json
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas   1321363 Jun 22 10:10 cric_ddmendpoints.json
[2024-06-22 14:07:43] drwx------ 4 boincer umatlas      4096 Jun 22 10:10 pilot3
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas      9220 Jun 22 14:01 init_data.xml
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas 262014737 Jun 22 14:05 HITS.40024023._001655.pool.root.1
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas       532 Jun 22 14:05 boinc_task_state.xml
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas      1053 Jun 22 14:06 memory_monitor_summary.json
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas         0 Jun 22 14:06 agis_ddmendpoints.agis.ALL.json
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas    392834 Jun 22 14:06 log.40024023._001655.job.log.tgz.1
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas        95 Jun 22 14:06 pilot_heartbeat.json
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas      7754 Jun 22 14:07 heartbeat.json
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 14:07 boinc_mmap_file
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas        28 Jun 22 14:07 wrapper_checkpoint.txt
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas      4336 Jun 22 14:07 pilotlog.txt
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas   1398304 Jun 22 14:07 log.40024023._001655.job.log.1
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas       357 Jun 22 14:07 output.list
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas       620 Jun 22 14:07 runtime_log
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas   1812480 Jun 22 14:07 result.tar.gz
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas     11382 Jun 22 14:07 runtime_log.err
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas       648 Jun 22 14:07 FDgNDmLDDf5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmxdnKDmx6fVHn.diag
[2024-06-22 14:07:43] -rw-r--r-- 1 boincer umatlas     21667 Jun 22 14:07 stderr.txt
[2024-06-22 14:07:43] HITS file was successfully produced:
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas 262014737 Jun 22 14:05 shared/HITS.pool.root.1
[2024-06-22 14:07:43]  *** Contents of shared directory: ***
[2024-06-22 14:07:43] total 843588
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas 599488580 Jun 22 10:08 ATLAS.root_0
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 10:08 start_atlas.sh
[2024-06-22 14:07:43] -rw-r--r-- 2 boincer umatlas    482490 Jun 22 10:08 input.tar.gz
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas 262014737 Jun 22 14:05 HITS.pool.root.1
[2024-06-22 14:07:43] -rw------- 1 boincer umatlas   1812480 Jun 22 14:07 result.tar.gz
14:07:45 (650419): run_atlas exited; CPU time 53921.633509
14:07:45 (650419): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN