Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:36:55 (669603): wrapper (7.7.26015): starting
07:36:55 (669603): wrapper: running run_atlas (--nthreads 3)
[2024-06-22 07:36:55] Arguments: --nthreads 3
[2024-06-22 07:36:55] Threads: 3
[2024-06-22 07:36:55] Checking for CVMFS
[2024-06-22 07:36:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 07:36:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 07:36:56] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 07:36:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 07:36:56] 2.11.3.0 4014315 625 40780 134169 3 189 4654581 6144001 9193 130560 0 3028057 99.998 98145 1590 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.188.245:3126 1
[2024-06-22 07:36:56] CVMFS is ok
[2024-06-22 07:36:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 07:36:56] Checking for apptainer binary...
[2024-06-22 07:36:56] apptainer is not installed, using version from CVMFS
[2024-06-22 07:36:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 07:36:56] h12dsi-n6
[2024-06-22 07:36:56] apptainer works
[2024-06-22 07:36:56] Set ATHENA_PROC_NUMBER=3
[2024-06-22 07:36:56] Set ATHENA_CORE_NUMBER=3
[2024-06-22 07:36:57] Starting ATLAS job with PandaID=6241352484
[2024-06-22 07:36:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:04:48]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:04:48] 2024-06-23 04:04:32,074 | INFO     | chi2: 5.925320803738331
[2024-06-22 21:04:48] 2024-06-23 04:04:32,075 | INFO     | model: linear, x: [1719067066.0, 1719067127.0, 1719067188.0, 1719067249.0, 1719067310.0, 1719067371.0, 1719067432.0, 1719067493.0, 1719067554.0, 1719067615.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,075 | INFO     | sum of square deviations: 152303097490.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,088 | INFO     | sum of deviations: 585138622352.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,088 | INFO     | mean x: 1719091100.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,088 | INFO     | mean y: 2304903.7439797213
[2024-06-22 21:04:48] 2024-06-23 04:04:32,088 | INFO     | -- intersect: -6602331604.174913
[2024-06-22 21:04:48] 2024-06-23 04:04:32,088 | INFO     | intersect: -6602331604.174913
[2024-06-22 21:04:48] 2024-06-23 04:04:32,089 | INFO     | chi2: 5.179995217325454
[2024-06-22 21:04:48] 2024-06-23 04:04:32,089 | INFO     | current chi2=5.179995217325454 (change=12.578653732007977 %)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,089 | INFO     | right removable region: 788
[2024-06-22 21:04:48] 2024-06-23 04:04:32,090 | INFO     | model: linear, x: [1719067371.0, 1719067432.0, 1719067493.0, 1719067554.0, 1719067615.0, 1719067676.0, 1719067737.0, 1719067798.0, 1719067859.0, 1719067920.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,090 | INFO     | sum of square deviations: 152303097490.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,103 | INFO     | sum of deviations: 349684199948.00006
[2024-06-22 21:04:48] 2024-06-23 04:04:32,103 | INFO     | mean x: 1719091405.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,103 | INFO     | mean y: 2312601.825095057
[2024-06-22 21:04:48] 2024-06-23 04:04:32,103 | INFO     | -- intersect: -3944679366.833837
[2024-06-22 21:04:48] 2024-06-23 04:04:32,103 | INFO     | intersect: -3944679366.833837
[2024-06-22 21:04:48] 2024-06-23 04:04:32,104 | INFO     | chi2: 3.390511838584896
[2024-06-22 21:04:48] 2024-06-23 04:04:32,104 | INFO     | current chi2=3.390511838584896 (change=42.77926966509906 %)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,105 | INFO     | model: linear, x: [1719067676.0, 1719067737.0, 1719067798.0, 1719067859.0, 1719067920.0, 1719067981.0, 1719068042.0, 1719068103.0, 1719068164.0, 1719068225.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,105 | INFO     | sum of square deviations: 149425908660.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,117 | INFO     | sum of deviations: 203098590673.00006
[2024-06-22 21:04:48] 2024-06-23 04:04:32,118 | INFO     | mean x: 1719091557.5
[2024-06-22 21:04:48] 2024-06-23 04:04:32,118 | INFO     | mean y: 2320369.775510204
[2024-06-22 21:04:48] 2024-06-23 04:04:32,118 | INFO     | -- intersect: -2334256169.708942
[2024-06-22 21:04:48] 2024-06-23 04:04:32,118 | INFO     | intersect: -2334256169.708942
[2024-06-22 21:04:48] 2024-06-23 04:04:32,119 | INFO     | chi2: 2.0033929646429116
[2024-06-22 21:04:48] 2024-06-23 04:04:32,119 | INFO     | current chi2=2.0033929646429116 (change=40.911783824383534 %)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,119 | INFO     | model: linear, x: [1719067981.0, 1719068042.0, 1719068103.0, 1719068164.0, 1719068225.0, 1719068286.0, 1719068347.0, 1719068408.0, 1719068469.0, 1719068530.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,120 | INFO     | sum of square deviations: 146585185630.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,132 | INFO     | sum of deviations: 66411006647.00004
[2024-06-22 21:04:48] 2024-06-23 04:04:32,136 | INFO     | mean x: 1719091710.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,136 | INFO     | mean y: 2327707.6097560977
[2024-06-22 21:04:48] 2024-06-23 04:04:32,136 | INFO     | -- intersect: -776513690.9186326
[2024-06-22 21:04:48] 2024-06-23 04:04:32,136 | INFO     | intersect: -776513690.9186326
[2024-06-22 21:04:48] 2024-06-23 04:04:32,137 | INFO     | chi2: 0.8032485722007869
[2024-06-22 21:04:48] 2024-06-23 04:04:32,137 | INFO     | current chi2=0.8032485722007869 (change=59.90559084627915 %)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,137 | INFO     | model: linear, x: [1719068286.0, 1719068347.0, 1719068408.0, 1719068469.0, 1719068530.0, 1719068591.0, 1719068652.0, 1719068713.0, 1719068774.0, 1719068835.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,138 | INFO     | sum of square deviations: 143780695837.5
[2024-06-22 21:04:48] 2024-06-23 04:04:32,149 | INFO     | sum of deviations: 48677245887.5
[2024-06-22 21:04:48] 2024-06-23 04:04:32,150 | INFO     | mean x: 1719091862.5
[2024-06-22 21:04:48] 2024-06-23 04:04:32,150 | INFO     | mean y: 2328669.6472868216
[2024-06-22 21:04:48] 2024-06-23 04:04:32,150 | INFO     | -- intersect: -579673363.4259721
[2024-06-22 21:04:48] 2024-06-23 04:04:32,150 | INFO     | intersect: -579673363.4259721
[2024-06-22 21:04:48] 2024-06-23 04:04:32,151 | INFO     | chi2: 0.771279585822552
[2024-06-22 21:04:48] 2024-06-23 04:04:32,151 | INFO     | current chi2=0.771279585822552 (change=3.979961805676728 %)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,151 | INFO     | left removable region: 40
[2024-06-22 21:04:48] 2024-06-23 04:04:32,151 | INFO     | model: linear, x: [1719069506.0, 1719069567.0, 1719069628.0, 1719069689.0, 1719069750.0, 1719069811.0, 1719069872.0, 1719069933.0, 1719069994.0, 1719070055.0, 1719
[2024-06-22 21:04:48] 2024-06-23 04:04:32,152 | INFO     | sum of square deviations: 129772431327.0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,162 | INFO     | sum of deviations: 94706997712.99998
[2024-06-22 21:04:48] 2024-06-23 04:04:32,162 | INFO     | mean x: 1719092289.5
[2024-06-22 21:04:48] 2024-06-23 04:04:32,162 | INFO     | mean y: 2331162.807486631
[2024-06-22 21:04:48] 2024-06-23 04:04:32,162 | INFO     | -- intersect: -1252250167.4895804
[2024-06-22 21:04:48] 2024-06-23 04:04:32,162 | INFO     | intersect: -1252250167.4895804
[2024-06-22 21:04:48] 2024-06-23 04:04:32,163 | INFO     | chi2: 0.008209898313842027
[2024-06-22 21:04:48] 2024-06-23 04:04:32,163 | INFO     | -- intersect: -1252250167.4895804
[2024-06-22 21:04:48] 2024-06-23 04:04:32,163 | INFO     | current memory leak: 0.73 B/s (using 748 data points, chi2=0.01)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | ..............................
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . Timing measurements:
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . get job = 0 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . initial setup = 3 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . payload setup = 8 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . stage-in = 0 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . payload execution = 48397 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . stage-out = 2 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | . log creation = 0 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,164 | INFO     | ..............................
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | 
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | job summary report
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | --------------------------------------------------
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | PanDA job id: 6241352484
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | task id: 38921013
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | errors: (none)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,622 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | pilot state: finished 
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | transexitcode: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | exeerrorcode: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | exeerrordiag: 
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | exitcode: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | exitmsg: OK
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | cpuconsumptiontime: 143027 s
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | nevents: 400
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | neventsw: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | pid: 684980
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | pgrp: 684980
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | corecount: 3
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | event service: False
[2024-06-22 21:04:48] 2024-06-23 04:04:32,623 | INFO     | sizes: {0: 2387091, 1: 2387091, 7: 2387325, 11: 2387353, 48410: 2433738, 48413: 2442898, 48422: 2443012}
[2024-06-22 21:04:48] 2024-06-23 04:04:32,624 | INFO     | --------------------------------------------------
[2024-06-22 21:04:48] 2024-06-23 04:04:32,624 | INFO     | 
[2024-06-22 21:04:48] 2024-06-23 04:04:32,624 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/28
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | job 6241352484 has completed (purged errors)
[2024-06-22 21:04:48] 2024-06-23 04:04:32,661 | INFO     | overall cleanup function is called
[2024-06-22 21:04:48] 2024-06-23 04:04:33,670 | INFO     | --- collectZombieJob: --- 10, [684980]
[2024-06-22 21:04:48] 2024-06-23 04:04:33,670 | INFO     | zombie collector waiting for pid 684980
[2024-06-22 21:04:48] 2024-06-23 04:04:33,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:04:48] 2024-06-23 04:04:34,678 | INFO     | collected zombie processes
[2024-06-22 21:04:48] 2024-06-23 04:04:34,678 | INFO     | will now attempt to kill all subprocesses of pid=684980
[2024-06-22 21:04:48] 2024-06-23 04:04:34,857 | INFO     | process IDs to be killed: [684980] (in reverse order)
[2024-06-22 21:04:48] 2024-06-23 04:04:35,076 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:04:48] 2024-06-23 04:04:35,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:04:48] 2024-06-23 04:04:35,096 | INFO     | did not find any defunct processes belonging to 684980
[2024-06-22 21:04:48] 2024-06-23 04:04:35,111 | INFO     | did not find any defunct processes belonging to 684980
[2024-06-22 21:04:48] 2024-06-23 04:04:35,112 | INFO     | ready for new job
[2024-06-22 21:04:48] 2024-06-23 04:04:35,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:04:48] 2024-06-23 04:04:35,117 | INFO     | *************************************
[2024-06-22 21:04:48] 2024-06-23 04:04:35,117 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:04:48] 2024-06-23 04:04:35,117 | INFO     | *************************************
[2024-06-22 21:04:48] 2024-06-23 04:04:35,117 | INFO     | 
[2024-06-22 21:04:48] 2024-06-23 04:04:35,124 | INFO     | architecture information:
[2024-06-22 21:04:48] 2024-06-23 04:04:35,124 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:04:48] 2024-06-23 04:04:35,145 | INFO     | cat /etc/os-release:
[2024-06-22 21:04:48] NAME="CentOS Linux"
[2024-06-22 21:04:48] VERSION="7 (Core)"
[2024-06-22 21:04:48] ID="centos"
[2024-06-22 21:04:48] ID_LIKE="rhel fedora"
[2024-06-22 21:04:48] VERSION_ID="7"
[2024-06-22 21:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:04:48] ANSI_COLOR="0;31"
[2024-06-22 21:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:04:48] HOME_URL="https://www.centos.org/"
[2024-06-22 21:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:04:48] 
[2024-06-22 21:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:04:48] 
[2024-06-22 21:04:48] 2024-06-23 04:04:35,145 | INFO     | *************************************
[2024-06-22 21:04:48] 2024-06-23 04:04:35,648 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/28
[2024-06-22 21:04:48] 2024-06-23 04:04:35,673 | INFO     | sufficient remaining disk space (394569711616 B)
[2024-06-22 21:04:48] 2024-06-23 04:04:35,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:04:48] 2024-06-23 04:04:35,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:04:48] 2024-06-23 04:04:35,735 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 21:04:48] 2024-06-23 04:04:35,735 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 21:04:48] 2024-06-23 04:04:35,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:04:48] 2024-06-23 04:04:35,735 | INFO     | will abort loop
[2024-06-22 21:04:48] 2024-06-23 04:04:35,987 | INFO     | all data control threads have been joined
[2024-06-22 21:04:48] 2024-06-23 04:04:36,144 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:04:48] 2024-06-23 04:04:36,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:04:48] 2024-06-23 04:04:36,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:04:48] 2024-06-23 04:04:36,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:04:48] 2024-06-23 04:04:36,678 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:36,694 | INFO     | all job control threads have been joined
[2024-06-22 21:04:48] 2024-06-23 04:04:36,741 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:36,924 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:36,992 | INFO     | [data] control thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,050 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,075 | INFO     | all payload control threads have been joined
[2024-06-22 21:04:48] 2024-06-23 04:04:37,240 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:04:48] 2024-06-23 04:04:37,424 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,539 | INFO     | [job] validate thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,550 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,629 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,699 | INFO     | [job] control thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:37,836 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:38,082 | INFO     | [payload] control thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:38,163 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:38,256 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:38,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:04:48] 2024-06-23 04:04:42,292 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:04:48] 2024-06-23 04:04:43,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132106829367104)>', '<ExcThread(monitor, started 132106315368192)>']
[2024-06-22 21:04:48] 2024-06-23 04:04:44,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:04:48] 2024-06-23 04:04:44,186 | INFO     | [monitor] control thread has ended
[2024-06-22 21:04:48] 2024-06-23 04:04:48,317 | INFO     | all workflow threads have been joined
[2024-06-22 21:04:48] 2024-06-23 04:04:48,317 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:04:48] 2024-06-23 04:04:48,317 | INFO     | traces error code: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:48,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:04:48] 2024-06-23 04:04:48,427 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:04:48] 2024-06-23 04:04:48,432 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:04:48] 2024-06-23 04:04:48,437 [wrapper] pilotpid: 677523
[2024-06-22 21:04:48] 2024-06-23 04:04:48,441 [wrapper] Pilot exit status: 0
[2024-06-22 21:04:48] 2024-06-23 04:04:48,453 [wrapper] pandaids: 6241352484
[2024-06-22 21:04:48] 2024-06-23 04:04:48,552 [wrapper] cleanup supervisor_pilot 2484178 677524
[2024-06-22 21:04:48] 2024-06-23 04:04:48,557 [wrapper] Test setup, not cleaning
[2024-06-22 21:04:48] 2024-06-23 04:04:48,559 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:04:48] 2024-06-23 04:04:48,563 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:04:48] 2024-06-23 04:04:48,573 [wrapper] apfmon messages muted
[2024-06-22 21:04:48]  *** Error codes and diagnostics ***
[2024-06-22 21:04:48]     "exeErrorCode": 0,
[2024-06-22 21:04:48]     "exeErrorDiag": "",
[2024-06-22 21:04:48]     "pilotErrorCode": 0,
[2024-06-22 21:04:48]     "pilotErrorDiag": "",
[2024-06-22 21:04:48]  *** Listing of results directory ***
[2024-06-22 21:04:48] total 887960
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc    469766 Jun 22 02:57 pilot3.tar.gz
[2024-06-22 21:04:48] -rwx------ 1 boinc boinc     32308 Jun 22 03:03 runpilot2-wrapper.sh
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc      5654 Jun 22 03:03 queuedata.json
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc       100 Jun 22 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:04:48] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 07:36 run_atlas
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc       105 Jun 22 07:36 job.xml
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc 540406833 Jun 22 07:36 EVNT.38776210._000694.pool.root.1
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:36 start_atlas.sh
[2024-06-22 21:04:48] drwxrwx--x 2 boinc boinc      4096 Jun 22 07:36 shared
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc    482533 Jun 22 07:36 input.tar.gz
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc         0 Jun 22 07:36 boinc_lockfile
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc      2647 Jun 22 07:36 pandaJob.out
[2024-06-22 21:04:48] -rw------- 1 boinc boinc       424 Jun 22 07:36 setup.sh.local
[2024-06-22 21:04:48] -rw------- 1 boinc boinc   1025922 Jun 22 07:37 agis_schedconf.cvmfs.json
[2024-06-22 21:04:48] -rw------- 1 boinc boinc   1321363 Jun 22 07:37 cric_ddmendpoints.json
[2024-06-22 21:04:48] drwx------ 4 boinc boinc      4096 Jun 22 07:37 pilot3
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc      7368 Jun 22 14:08 init_data.xml
[2024-06-22 21:04:48] -rw------- 1 boinc boinc 351229354 Jun 22 21:03 HITS.38921013._053385.pool.root.1
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc       533 Jun 22 21:03 boinc_task_state.xml
[2024-06-22 21:04:48] -rw------- 1 boinc boinc      1039 Jun 22 21:04 memory_monitor_summary.json
[2024-06-22 21:04:48] -rw------- 1 boinc boinc        95 Jun 22 21:04 pilot_heartbeat.json
[2024-06-22 21:04:48] -rw------- 1 boinc boinc         0 Jun 22 21:04 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:04:48] -rw------- 1 boinc boinc    710286 Jun 22 21:04 log.38921013._053385.job.log.tgz.1
[2024-06-22 21:04:48] -rw------- 1 boinc boinc      7646 Jun 22 21:04 heartbeat.json
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc      8192 Jun 22 21:04 boinc_mmap_file
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc        29 Jun 22 21:04 wrapper_checkpoint.txt
[2024-06-22 21:04:48] -rw------- 1 boinc boinc      4406 Jun 22 21:04 pilotlog.txt
[2024-06-22 21:04:48] -rw------- 1 boinc boinc   6339987 Jun 22 21:04 log.38921013._053385.job.log.1
[2024-06-22 21:04:48] -rw------- 1 boinc boinc       357 Jun 22 21:04 output.list
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc       620 Jun 22 21:04 runtime_log
[2024-06-22 21:04:48] -rw------- 1 boinc boinc   7065600 Jun 22 21:04 result.tar.gz
[2024-06-22 21:04:48] -rw------- 1 boinc boinc       651 Jun 22 21:04 ZsHLDmllCf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmKcYKDmx2LFNn.diag
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc     11153 Jun 22 21:04 runtime_log.err
[2024-06-22 21:04:48] -rw-r--r-- 1 boinc boinc     21275 Jun 22 21:04 stderr.txt
[2024-06-22 21:04:48] HITS file was successfully produced:
[2024-06-22 21:04:48] -rw------- 1 boinc boinc 351229354 Jun 22 21:03 shared/HITS.pool.root.1
[2024-06-22 21:04:48]  *** Contents of shared directory: ***
[2024-06-22 21:04:48] total 878144
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc 540406833 Jun 22 07:36 ATLAS.root_0
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:36 start_atlas.sh
[2024-06-22 21:04:48] -rw-r--r-- 2 boinc boinc    482533 Jun 22 07:36 input.tar.gz
[2024-06-22 21:04:48] -rw------- 1 boinc boinc 351229354 Jun 22 21:03 HITS.pool.root.1
[2024-06-22 21:04:48] -rw------- 1 boinc boinc   7065600 Jun 22 21:04 result.tar.gz
21:04:50 (669603): run_atlas exited; CPU time 142304.761489
21:04:50 (669603): called boinc_finish(0)

</stderr_txt>
]]>

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