Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-23 06:47:28 (3913206): Detected: vboxwrapper 26206
2024-06-23 06:47:28 (3913206): Detected: BOINC client v7.16.6
2024-06-23 06:47:28 (3913206): Detected: VirtualBox VboxManage Interface (Version: 6.1.38)
2024-06-23 06:47:28 (3913206): Successfully copied 'init_data.xml' to the shared directory.
2024-06-23 06:47:28 (3913206): Create VM. (boinc_62265083deb739bd, slot#1)
2024-06-23 06:47:28 (3913206): Setting Memory Size for VM. (4300MB)
2024-06-23 06:47:28 (3913206): Setting CPU Count for VM. (3)
2024-06-23 06:47:28 (3913206): Setting Chipset Options for VM.
2024-06-23 06:47:28 (3913206): Setting Graphics Controller Options for VM.
2024-06-23 06:47:28 (3913206): Setting Boot Options for VM.
2024-06-23 06:47:28 (3913206): Setting Network Configuration for NAT.
2024-06-23 06:47:28 (3913206): Enabling VM Network Access.
2024-06-23 06:47:28 (3913206): Disabling USB Support for VM.
2024-06-23 06:47:28 (3913206): Disabling COM Port Support for VM.
2024-06-23 06:47:28 (3913206): Disabling LPT Port Support for VM.
2024-06-23 06:47:28 (3913206): Disabling Audio Support for VM.
2024-06-23 06:47:29 (3913206): Disabling Clipboard Support for VM.
2024-06-23 06:47:29 (3913206): Disabling Drag and Drop Support for VM.
2024-06-23 06:47:29 (3913206): Adding storage controller(s) to VM.
2024-06-23 06:47:29 (3913206): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-23 06:47:29 (3913206): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-23 06:47:29 (3913206): forwarding host port 35927 to guest port 80
2024-06-23 06:47:29 (3913206): Enabling remote desktop for VM.
2024-06-23 06:47:29 (3913206): Enabling shared directory for VM.
2024-06-23 06:47:29 (3913206): Starting VM using VBoxManage interface. (boinc_62265083deb739bd, slot#1)
2024-06-23 06:47:30 (3913206): Successfully started VM. (PID = '3913595')
2024-06-23 06:47:30 (3913206): Reporting VM Process ID to BOINC.
2024-06-23 06:47:30 (3913206): Guest Log: BIOS: VirtualBox 6.1.38
2024-06-23 06:47:30 (3913206): Guest Log: CPUID EDX: 0x178bfbff
2024-06-23 06:47:30 (3913206): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-23 06:47:30 (3913206): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-23 06:47:30 (3913206): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-23 06:47:30 (3913206): Detected: Web Application Enabled (http://localhost:35927)
2024-06-23 06:47:30 (3913206): Detected: Remote Desktop Enabled (localhost:39197)
2024-06-23 06:47:30 (3913206): Preference change detected
2024-06-23 06:47:30 (3913206): Setting CPU throttle for VM. (90%)
2024-06-23 06:47:30 (3913206): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-23 06:47:32 (3913206): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-23 06:47:32 (3913206): Guest Log: BIOS: Booting from Hard Disk...
2024-06-23 06:47:35 (3913206): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-23 06:47:35 (3913206): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-23 06:47:35 (3913206): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-23 06:47:42 (3913206): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-23 06:47:42 (3913206): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-23 06:47:48 (3913206): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000230 main     Log opened 2024-06-23T10:47:46.485711000Z
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000364 main     OS Product: Linux
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000414 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000455 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000494 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000495 main     Process ID: 1274
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.000496 main     Package type: LINUX_64BITS_GENERIC
2024-06-23 06:47:48 (3913206): Guest Log: 00:00:00.001517 main     5.2.32 r132073 started. Verbose level = 0
2024-06-23 06:47:48 (3913206): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-23 06:47:48 (3913206): Guest Log: [INFO] Mounting shared directory
2024-06-23 06:47:48 (3913206): Guest Log: [INFO] Checking for init_data.xml
2024-06-23 06:48:03 (3913206): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-23 06:48:03 (3913206): Guest Log: [INFO] Detected branch: prod
2024-06-23 06:48:03 (3913206): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-23 06:48:03 (3913206): Guest Log: Copying input files
2024-06-23 06:48:06 (3913206): Guest Log: Copied input files into RunAtlas.
2024-06-23 06:48:06 (3913206): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-23 06:48:06 (3913206): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-23 06:48:06 (3913206): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-23 06:48:06 (3913206): Guest Log: Further information can be found at the LHC@home message board.
2024-06-23 06:48:14 (3913206): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-23 06:48:15 (3913206): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-23 06:48:15 (3913206): Guest Log: 2.6.3.0 1550 0 32220 134199 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-23 06:48:16 (3913206): Guest Log: copied the webapp to /var/www
2024-06-23 06:48:16 (3913206): Guest Log: ATHENA_PROC_NUMBER=3
2024-06-23 06:48:16 (3913206): Guest Log: ATHENA_CORE_NUMBER=3
2024-06-23 06:48:16 (3913206): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-23 06:48:16 (3913206): Guest Log:  *** Starting ATLAS job. (PandaID=6241255676 taskID=38921013) ***
2024-06-23 08:26:31 (3913206): Status Report: Elapsed Time: '6000.000000'
2024-06-23 08:26:31 (3913206): Status Report: CPU Time: '13610.160000'
2024-06-23 10:05:31 (3913206): Status Report: Elapsed Time: '12000.000000'
2024-06-23 10:05:31 (3913206): Status Report: CPU Time: '30224.750000'
2024-06-23 11:44:32 (3913206): Status Report: Elapsed Time: '18000.000000'
2024-06-23 11:44:32 (3913206): Status Report: CPU Time: '46840.130000'
2024-06-23 13:23:32 (3913206): Status Report: Elapsed Time: '24000.000000'
2024-06-23 13:23:32 (3913206): Status Report: CPU Time: '63454.810000'
2024-06-23 15:02:32 (3913206): Status Report: Elapsed Time: '30000.000000'
2024-06-23 15:02:32 (3913206): Status Report: CPU Time: '80086.860000'
2024-06-23 16:41:33 (3913206): Status Report: Elapsed Time: '36000.000000'
2024-06-23 16:41:33 (3913206): Status Report: CPU Time: '96707.720000'
2024-06-23 18:20:33 (3913206): Status Report: Elapsed Time: '42000.000000'
2024-06-23 18:20:33 (3913206): Status Report: CPU Time: '113322.940000'
2024-06-23 19:59:34 (3913206): Status Report: Elapsed Time: '48000.000000'
2024-06-23 19:59:34 (3913206): Status Report: CPU Time: '129950.930000'
2024-06-23 21:38:34 (3913206): Status Report: Elapsed Time: '54000.000000'
2024-06-23 21:38:34 (3913206): Status Report: CPU Time: '146571.610000'
2024-06-23 22:47:49 (3913206): Guest Log:  *** Job finished ***
2024-06-23 22:47:49 (3913206): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:40,328 | INFO     | [data] copytool_out thread has finished
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:41,330 | INFO     | [job] queue monitor thread has finished
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:43,432 | INFO     | [data] queue_monitor thread has finished
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:43,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135181928256)>', '<ExcThread(monitor, started 140134339028736)>']
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:44,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:44,014 | INFO     | [monitor] control thread has ended
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,492 | INFO     | all workflow threads have been joined
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,492 | INFO     | end of generic workflow (traces error code: 0)
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,493 | INFO     | traces error code: 0
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,572 [wrapper] ==== pilot stdout END ====
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,579 [wrapper] ==== wrapper stdout RESUME ====
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,585 [wrapper] pilotpid: 6427
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,591 [wrapper] Pilot exit status: 0
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,651 [wrapper] pandaids: 6241255676
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,684 [wrapper] cleanup supervisor_pilot 14603 6428
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,692 [wrapper] Test setup, not cleaning
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,698 [wrapper] ==== wrapper stdout END ====
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,704 [wrapper] ==== wrapper stderr END ====
2024-06-23 22:47:49 (3913206): Guest Log: 2024-06-24 02:47:48,716 [wrapper] apfmon messages muted
2024-06-23 22:47:49 (3913206): Guest Log:  *** Error codes and diagnostics ***
2024-06-23 22:47:49 (3913206): Guest Log:     "exeErrorCode": 0,
2024-06-23 22:47:49 (3913206): Guest Log:     "exeErrorDiag": "",
2024-06-23 22:47:49 (3913206): Guest Log:     "pilotErrorCode": 0,
2024-06-23 22:47:49 (3913206): Guest Log:     "pilotErrorDiag": "",
2024-06-23 22:47:49 (3913206): Guest Log:  *** Listing of results directory ***
2024-06-23 22:47:49 (3913206): Guest Log: total 350660
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 22 07:07 pilot3.tar.gz
2024-06-23 22:47:49 (3913206): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 22 07:18 runpilot2-wrapper.sh
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 22 07:18 queuedata.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 23 10:48 start_atlas.sh
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas      8772 Jun 23 10:48 init_data.xml
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas    482528 Jun 23 10:48 input.tar.gz
2024-06-23 22:47:49 (3913206): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 10:48 EVNT.38776210._000792.pool.root.1 -> /data/./ATLAS.root_0
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas      2647 Jun 23 10:48 pandaJob.out
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas       424 Jun 23 10:48 setup.sh.local
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas   1025304 Jun 23 10:49 agis_schedconf.cvmfs.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 23 10:49 cric_ddmendpoints.json
2024-06-23 22:47:49 (3913206): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 10:49 pilot3
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas 342658249 Jun 24 02:45 HITS.38921013._053245.pool.root.1
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas      1043 Jun 24 02:46 memory_monitor_summary.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas         0 Jun 24 02:46 agis_ddmendpoints.agis.ALL.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas    698820 Jun 24 02:46 log.38921013._053245.job.log.tgz.1
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas        95 Jun 24 02:46 pilot_heartbeat.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas      7745 Jun 24 02:47 heartbeat.json
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 24 02:47 pilotlog.txt
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas   5778147 Jun 24 02:47 log.38921013._053245.job.log.1
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas       357 Jun 24 02:47 output.list
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 24 02:47 runtime_log
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas   6492160 Jun 24 02:47 result.tar.gz
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas       645 Jun 24 02:47 YnVLDmYCAf5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmVaYKDmvFL8Rm.diag
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 atlas atlas     10913 Jun 24 02:47 runtime_log.err
2024-06-23 22:47:49 (3913206): Guest Log: Looking for outputfile HITS.38921013._053245.pool.root.1
2024-06-23 22:47:49 (3913206): Guest Log: HITS file was successfully produced
2024-06-23 22:47:49 (3913206): Guest Log: -rw-------. 1 atlas atlas 342658249 Jun 24 02:45 /home/atlas/RunAtlas/HITS.38921013._053245.pool.root.1
2024-06-23 22:47:49 (3913206): Guest Log: Successfully finished the ATLAS job!
2024-06-23 22:47:49 (3913206): Guest Log: Copying the results back to the shared directory!
2024-06-23 22:47:49 (3913206): Guest Log:  *** Contents of shared directory: ***
2024-06-23 22:47:49 (3913206): Guest Log: total 535924
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 root root 541770177 Jun 23 10:47 ATLAS.root_0
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 root root      8772 Jun 23 10:47 init_data.xml
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 root root    482528 Jun 23 10:47 input.tar.gz
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 root root   6492160 Jun 24 02:47 result.tar.gz
2024-06-23 22:47:49 (3913206): Guest Log: -rw-r--r--. 1 root root     17537 Jun 23 10:47 start_atlas.sh
2024-06-23 22:47:49 (3913206): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-23 22:47:49 (3913206): VM Completion File Detected.
2024-06-23 22:47:49 (3913206): Powering off VM.
2024-06-23 22:47:50 (3913206): Successfully stopped VM.
2024-06-23 22:47:50 (3913206): Deregistering VM. (boinc_62265083deb739bd, slot#1)
2024-06-23 22:47:50 (3913206): Removing network bandwidth throttle group from VM.
2024-06-23 22:47:50 (3913206): Removing VM from VirtualBox.
22:47:55 (3913206): called boinc_finish(0)

</stderr_txt>
]]>

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