Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 15:49:37 (38332): Detected: vboxwrapper 26206
2024-06-22 15:49:37 (38332): Detected: BOINC client v7.24.1
2024-06-22 15:49:37 (38332): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2024-06-22 15:49:38 (38332): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 15:49:38 (38332): Create VM. (boinc_6651294dd67df5ad, slot#1)
2024-06-22 15:49:39 (38332): Setting Memory Size for VM. (4800MB)
2024-06-22 15:49:39 (38332): Setting CPU Count for VM. (3)
2024-06-22 15:49:39 (38332): Setting Chipset Options for VM.
2024-06-22 15:49:39 (38332): Setting Graphics Controller Options for VM.
2024-06-22 15:49:40 (38332): Setting Boot Options for VM.
2024-06-22 15:49:40 (38332): Setting Network Configuration for NAT.
2024-06-22 15:49:40 (38332): Enabling VM Network Access.
2024-06-22 15:49:40 (38332): Disabling USB Support for VM.
2024-06-22 15:49:41 (38332): Disabling COM Port Support for VM.
2024-06-22 15:49:41 (38332): Disabling LPT Port Support for VM.
2024-06-22 15:49:41 (38332): Disabling Audio Support for VM.
2024-06-22 15:49:41 (38332): Disabling Clipboard Support for VM.
2024-06-22 15:49:42 (38332): Disabling Drag and Drop Support for VM.
2024-06-22 15:49:42 (38332): Adding storage controller(s) to VM.
2024-06-22 15:49:42 (38332): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 15:49:43 (38332): Adding VirtualBox Guest Additions to VM.
2024-06-22 15:49:43 (38332): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 15:49:43 (38332): forwarding host port 62525 to guest port 80
2024-06-22 15:49:43 (38332): Enabling remote desktop for VM.
2024-06-22 15:49:44 (38332): Enabling shared directory for VM.
2024-06-22 15:49:45 (38332): Starting VM using VBoxManage interface. (boinc_6651294dd67df5ad, slot#1)
2024-06-22 15:49:49 (38332): Successfully started VM. (PID = '41080')
2024-06-22 15:49:49 (38332): Reporting VM Process ID to BOINC.
2024-06-22 15:49:49 (38332): Guest Log: BIOS: VirtualBox 7.0.6
2024-06-22 15:49:49 (38332): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 15:49:49 (38332): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 15:49:49 (38332): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 15:49:49 (38332): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 15:49:49 (38332): Detected: Web Application Enabled (http://localhost:62525)
2024-06-22 15:49:49 (38332): Detected: Remote Desktop Enabled (localhost:62526)
2024-06-22 15:49:49 (38332): Preference change detected
2024-06-22 15:49:49 (38332): Setting CPU throttle for VM. (100%)
2024-06-22 15:49:50 (38332): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 15:49:51 (38332): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 15:49:51 (38332): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 15:49:54 (38332): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 15:49:54 (38332): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 15:49:54 (38332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 15:50:19 (38332): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 15:50:19 (38332): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 15:50:24 (38332): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000112 main     Log opened 2024-06-22T15:50:22.228906000Z
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000187 main     OS Product: Linux
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000249 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000266 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 15:50:24 (38332): Guest Log: 00:00:00.000266 main     Process ID: 1303
2024-06-22 15:50:25 (38332): Guest Log: 00:00:00.000267 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 15:50:25 (38332): Guest Log: 00:00:00.000894 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 15:50:25 (38332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 15:50:25 (38332): Guest Log: [INFO] Mounting shared directory
2024-06-22 15:50:25 (38332): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 15:50:35 (38332): Guest Log: 00:00:10.002898 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 210 325 951 000ns (GuestNow=1 719 064 211 904 691 000 ns GuestLast=1 719 071 422 230 642 000 ns fSetTimeLastLoop=true )
2024-06-22 15:51:26 (38332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 15:51:26 (38332): Guest Log: [INFO] Detected branch: prod
2024-06-22 15:51:26 (38332): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 15:51:26 (38332): Guest Log: Copying input files
2024-06-22 15:51:29 (38332): Guest Log: Copied input files into RunAtlas.
2024-06-22 15:51:29 (38332): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2024-06-22 15:51:36 (38332): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 15:51:36 (38332): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 15:51:36 (38332): Guest Log: 2.6.3.0 1616 0 31612 134167 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2024-06-22 15:51:37 (38332): Guest Log: copied the webapp to /var/www
2024-06-22 15:51:37 (38332): Guest Log: ATHENA_PROC_NUMBER=3
2024-06-22 15:51:37 (38332): Guest Log: ATHENA_CORE_NUMBER=3
2024-06-22 15:51:37 (38332): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 15:51:37 (38332): Guest Log:  *** Starting ATLAS job. (PandaID=6241237570 taskID=40024031) ***
2024-06-22 17:29:51 (38332): Status Report: Elapsed Time: '6000.000000'
2024-06-22 17:29:51 (38332): Status Report: CPU Time: '16465.078125'
2024-06-22 19:09:53 (38332): Status Report: Elapsed Time: '12000.000000'
2024-06-22 19:09:53 (38332): Status Report: CPU Time: '34357.562500'
2024-06-22 20:49:55 (38332): Status Report: Elapsed Time: '18000.000000'
2024-06-22 20:49:55 (38332): Status Report: CPU Time: '52250.406250'
2024-06-22 21:10:44 (38332): Guest Log:  *** Job finished ***
2024-06-22 21:10:44 (38332): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:06,855 | INFO     | [data] queue_monitor thread has finished
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:12,112 | INFO     | job.realtimelogging is not enabled
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:13,153 | INFO     | [payload] run_realtimelog thread has finished
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:13,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459041589056)>', '<ExcThread(monitor, started 140458307086080)>']
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:14,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:14,577 | INFO     | [monitor] control thread has ended
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,734 | INFO     | all workflow threads have been joined
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,734 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,735 | INFO     | traces error code: 0
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,836 [wrapper] ==== pilot stdout END ====
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,839 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,843 [wrapper] pilotpid: 6462
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,846 [wrapper] Pilot exit status: 0
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,909 [wrapper] pandaids: 6241237570
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,933 [wrapper] cleanup supervisor_pilot 26267 6463
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,937 [wrapper] Test setup, not cleaning
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,941 [wrapper] ==== wrapper stdout END ====
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,944 [wrapper] ==== wrapper stderr END ====
2024-06-22 21:10:44 (38332): Guest Log: 2024-06-22 19:10:18,951 [wrapper] apfmon messages muted
2024-06-22 21:10:44 (38332): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 21:10:44 (38332): Guest Log:     "exeErrorCode": 0,
2024-06-22 21:10:44 (38332): Guest Log:     "exeErrorDiag": "",
2024-06-22 21:10:44 (38332): Guest Log:     "pilotErrorCode": 0,
2024-06-22 21:10:44 (38332): Guest Log:     "pilotErrorDiag": "",
2024-06-22 21:10:44 (38332): Guest Log:  *** Listing of results directory ***
2024-06-22 21:10:44 (38332): Guest Log: total 259792
2024-06-22 21:10:44 (38332): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 22 06:39 pilot3.tar.gz
2024-06-22 21:10:44 (38332): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 22 06:58 queuedata.json
2024-06-22 21:10:44 (38332): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 22 06:59 runpilot2-wrapper.sh
2024-06-22 21:10:44 (38332): Guest Log: -rwxr-xr-x. 1 atlas atlas      9042 Jun 22 13:51 init_data.xml
2024-06-22 21:10:44 (38332): Guest Log: -rwxr-xr-x. 1 atlas atlas    482531 Jun 22 13:51 input.tar.gz
2024-06-22 21:10:44 (38332): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 22 13:51 start_atlas.sh
2024-06-22 21:10:44 (38332): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 13:51 EVNT.40024029._000017.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 21:10:44 (38332): Guest Log: -rw-r--r--. 1 atlas atlas      2572 Jun 22 13:51 pandaJob.out
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas       459 Jun 22 13:51 setup.sh.local
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas   1025930 Jun 22 13:51 agis_schedconf.cvmfs.json
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 13:51 cric_ddmendpoints.json
2024-06-22 21:10:44 (38332): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 13:51 pilot3
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas 258371800 Jun 22 19:09 HITS.40024031._001642.pool.root.1
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 22 19:09 memory_monitor_summary.json
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 19:09 pilot_heartbeat.json
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 19:09 agis_ddmendpoints.agis.ALL.json
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas    364834 Jun 22 19:09 log.40024031._001642.job.log.tgz.1
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas      7727 Jun 22 19:09 heartbeat.json
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 22 19:10 pilotlog.txt
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas   1728870 Jun 22 19:10 log.40024031._001642.job.log.1
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 19:10 output.list
2024-06-22 21:10:44 (38332): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 19:10 runtime_log
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas   2109440 Jun 22 19:10 result.tar.gz
2024-06-22 21:10:44 (38332): Guest Log: -rw-r--r--. 1 atlas atlas     11291 Jun 22 19:10 runtime_log.err
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas       649 Jun 22 19:10 ISyLDmVt9e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmfZnKDmxXQwLo.diag
2024-06-22 21:10:44 (38332): Guest Log: Looking for outputfile HITS.40024031._001642.pool.root.1
2024-06-22 21:10:44 (38332): Guest Log: HITS file was successfully produced
2024-06-22 21:10:44 (38332): Guest Log: -rw-------. 1 atlas atlas 258371800 Jun 22 19:09 /home/atlas/RunAtlas/HITS.40024031._001642.pool.root.1
2024-06-22 21:10:45 (38332): Guest Log: Successfully finished the ATLAS job!
2024-06-22 21:10:45 (38332): Guest Log: Copying the results back to the shared directory!
2024-06-22 21:10:45 (38332): Guest Log:  *** Contents of shared directory: ***
2024-06-22 21:10:45 (38332): Guest Log: total 838960
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root 598093214 Jun 22 13:49 ATLAS.root_0
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root 258371800 Jun 22  2024 HITS.pool.root.1
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root      9042 Jun 22 13:49 init_data.xml
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root    482531 Jun 22 13:03 input.tar.gz
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root   2109440 Jun 22  2024 result.tar.gz
2024-06-22 21:10:45 (38332): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 22 13:03 start_atlas.sh
2024-06-22 21:10:45 (38332): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 21:10:45 (38332): VM Completion File Detected.
2024-06-22 21:10:45 (38332): Powering off VM.
2024-06-22 21:10:46 (38332): Successfully stopped VM.
2024-06-22 21:10:46 (38332): Deregistering VM. (boinc_6651294dd67df5ad, slot#1)
2024-06-22 21:10:46 (38332): Removing network bandwidth throttle group from VM.
2024-06-22 21:10:46 (38332): Removing VM from VirtualBox.
21:10:52 (38332): called boinc_finish(0)

</stderr_txt>
]]>

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