Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:59:30 (3615870): wrapper (7.7.26015): starting
04:59:30 (3615870): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 04:59:30] Arguments: --nthreads 4
[2024-06-24 04:59:30] Threads: 4
[2024-06-24 04:59:30] Checking for CVMFS
[2024-06-24 04:59:30] No cvmfs_config command found, will try listing directly
[2024-06-24 04:59:30] CVMFS is ok
[2024-06-24 04:59:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 04:59:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 04:59:30] Further information can be found at the LHC@home message board.
[2024-06-24 04:59:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 04:59:30] Checking for apptainer binary...
[2024-06-24 04:59:30] which: no apptainer in ((null))
[2024-06-24 04:59:30] apptainer is not installed, using version from CVMFS
[2024-06-24 04:59:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 04:59:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-24 04:59:31] apptainer works
[2024-06-24 04:59:31] Set ATHENA_PROC_NUMBER=4
[2024-06-24 04:59:31] Set ATHENA_CORE_NUMBER=4
[2024-06-24 04:59:31] Starting ATLAS job with PandaID=6241218712
[2024-06-24 04:59:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 17:00:26]  *** The last 200 lines of the pilot log: ***
[2024-06-24 17:00:26] 2024-06-24 15:00:12,727 | INFO     | fitting pss+swap vs Time
[2024-06-24 17:00:26] 2024-06-24 15:00:12,728 | INFO     | model: linear, x: [1719198007.0, 1719198068.0, 1719198129.0, 1719198190.0, 1719198251.0, 1719198312.0, 1719198373.0, 1719198434.0, 1719198495.0, 1719198556.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,728 | INFO     | sum of square deviations: 110513737210.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,735 | INFO     | sum of deviations: 412026949821.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,735 | INFO     | mean x: 1719219601.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,735 | INFO     | mean y: 2353653.1071932297
[2024-06-24 17:00:26] 2024-06-24 15:00:12,735 | INFO     | -- intersect: -6407390747.504835
[2024-06-24 17:00:26] 2024-06-24 15:00:12,735 | INFO     | intersect: -6407390747.504835
[2024-06-24 17:00:26] 2024-06-24 15:00:12,736 | INFO     | chi2: 4.5088617743149735
[2024-06-24 17:00:26] 2024-06-24 15:00:12,736 | INFO     | model: linear, x: [1719198007.0, 1719198068.0, 1719198129.0, 1719198190.0, 1719198251.0, 1719198312.0, 1719198373.0, 1719198434.0, 1719198495.0, 1719198556.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,737 | INFO     | sum of square deviations: 108192093680.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,743 | INFO     | sum of deviations: 453096283425.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,743 | INFO     | mean x: 1719219448.5
[2024-06-24 17:00:26] 2024-06-24 15:00:12,743 | INFO     | mean y: 2356334.190340909
[2024-06-24 17:00:26] 2024-06-24 15:00:12,743 | INFO     | -- intersect: -7197540774.846992
[2024-06-24 17:00:26] 2024-06-24 15:00:12,744 | INFO     | intersect: -7197540774.846992
[2024-06-24 17:00:26] 2024-06-24 15:00:12,744 | INFO     | chi2: 3.7612208771643534
[2024-06-24 17:00:26] 2024-06-24 15:00:12,744 | INFO     | current chi2=3.7612208771643534 (change=16.581588315916125 %)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,744 | INFO     | right removable region: 703
[2024-06-24 17:00:26] 2024-06-24 15:00:12,745 | INFO     | model: linear, x: [1719198312.0, 1719198373.0, 1719198434.0, 1719198495.0, 1719198556.0, 1719198617.0, 1719198678.0, 1719198739.0, 1719198800.0, 1719198861.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,745 | INFO     | sum of square deviations: 108192093680.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,751 | INFO     | sum of deviations: 244573598829.50006
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | mean x: 1719219753.5
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | mean y: 2364642.5411931816
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | -- intersect: -3884016958.8344407
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | intersect: -3884016958.8344407
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | chi2: 2.168448716717891
[2024-06-24 17:00:26] 2024-06-24 15:00:12,752 | INFO     | current chi2=2.168448716717891 (change=51.90695955527843 %)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,753 | INFO     | model: linear, x: [1719198617.0, 1719198678.0, 1719198739.0, 1719198800.0, 1719198861.0, 1719198922.0, 1719198983.0, 1719199044.0, 1719199105.0, 1719199166.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,753 | INFO     | sum of square deviations: 105903194950.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | sum of deviations: 113430360832.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | mean x: 1719219906.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | mean y: 2373379.9699570816
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | -- intersect: -1839041644.1868482
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | intersect: -1839041644.1868482
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | chi2: 0.8584708395107293
[2024-06-24 17:00:26] 2024-06-24 15:00:12,760 | INFO     | current chi2=0.8584708395107293 (change=60.41083042950219 %)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,761 | INFO     | model: linear, x: [1719198922.0, 1719198983.0, 1719199044.0, 1719199105.0, 1719199166.0, 1719199227.0, 1719199288.0, 1719199349.0, 1719199410.0, 1719199471.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,761 | INFO     | sum of square deviations: 103646808457.5
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | sum of deviations: 83639183333.00008
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | mean x: 1719220058.5
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | mean y: 2375390.7780979825
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | -- intersect: -1384972312.4713938
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | intersect: -1384972312.4713938
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | chi2: 0.7808399819018293
[2024-06-24 17:00:26] 2024-06-24 15:00:12,768 | INFO     | current chi2=0.7808399819018293 (change=9.042923071579736 %)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,769 | INFO     | left removable region: 30
[2024-06-24 17:00:26] 2024-06-24 15:00:12,769 | INFO     | model: linear, x: [1719199837.0, 1719199898.0, 1719199959.0, 1719200020.0, 1719200081.0, 1719200142.0, 1719200203.0, 1719200264.0, 1719200325.0, 1719200386.0, 1719
[2024-06-24 17:00:26] 2024-06-24 15:00:12,769 | INFO     | sum of square deviations: 94519770352.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,775 | INFO     | sum of deviations: 98843485122.00003
[2024-06-24 17:00:26] 2024-06-24 15:00:12,775 | INFO     | mean x: 1719220333.0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,775 | INFO     | mean y: 2380174.589895988
[2024-06-24 17:00:26] 2024-06-24 15:00:12,776 | INFO     | -- intersect: -1795484216.8858469
[2024-06-24 17:00:26] 2024-06-24 15:00:12,776 | INFO     | intersect: -1795484216.8858469
[2024-06-24 17:00:26] 2024-06-24 15:00:12,776 | INFO     | chi2: 0.0061457574256060295
[2024-06-24 17:00:26] 2024-06-24 15:00:12,776 | INFO     | -- intersect: -1795484216.8858469
[2024-06-24 17:00:26] 2024-06-24 15:00:12,776 | INFO     | current memory leak: 1.05 B/s (using 673 data points, chi2=0.01)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | ..............................
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . Timing measurements:
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . get job = 0 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . initial setup = 1 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . payload setup = 4 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . stage-in = 0 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . payload execution = 43200 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . stage-out = 1 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,777 | INFO     | . log creation = 0 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,778 | INFO     | ..............................
[2024-06-24 17:00:26] 2024-06-24 15:00:12,837 | WARNING  | process 3627554 is no longer using CPU - aborting
[2024-06-24 17:00:26] 2024-06-24 15:00:12,837 | INFO     | 
[2024-06-24 17:00:26] 2024-06-24 15:00:12,837 | INFO     | aborting job monitoring since job object (job id=6241218712) has expired
[2024-06-24 17:00:26] 2024-06-24 15:00:12,837 | INFO     | job summary report
[2024-06-24 17:00:26] 2024-06-24 15:00:12,837 | INFO     | --------------------------------------------------
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | PanDA job id: 6241218712
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | task id: 38921007
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | errors: (none)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | pilot state: finished 
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | transexitcode: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | exeerrorcode: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | exeerrordiag: 
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | exitcode: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | exitmsg: OK
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | cpuconsumptiontime: 169149 s
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | nevents: 400
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | neventsw: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | pid: 3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | pgrp: 3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | corecount: 4
[2024-06-24 17:00:26] 2024-06-24 15:00:12,838 | INFO     | event service: False
[2024-06-24 17:00:26] 2024-06-24 15:00:12,839 | INFO     | sizes: {0: 2387070, 1: 2387098, 6: 2387304, 12: 2387332, 43209: 2431566, 43210: 2440548, 43212: 2440732, 43215: 2440902}
[2024-06-24 17:00:26] 2024-06-24 15:00:12,839 | INFO     | --------------------------------------------------
[2024-06-24 17:00:26] 2024-06-24 15:00:12,839 | INFO     | 
[2024-06-24 17:00:26] 2024-06-24 15:00:12,839 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-24 17:00:26] 2024-06-24 15:00:12,854 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | job 6241218712 has completed (purged errors)
[2024-06-24 17:00:26] 2024-06-24 15:00:12,856 | INFO     | overall cleanup function is called
[2024-06-24 17:00:26] 2024-06-24 15:00:13,863 | INFO     | --- collectZombieJob: --- 10, [3627554]
[2024-06-24 17:00:26] 2024-06-24 15:00:13,863 | INFO     | zombie collector waiting for pid 3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:13,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 17:00:26] 2024-06-24 15:00:14,868 | INFO     | collected zombie processes
[2024-06-24 17:00:26] 2024-06-24 15:00:14,868 | INFO     | will now attempt to kill all subprocesses of pid=3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:14,951 | INFO     | process IDs to be killed: [3627554] (in reverse order)
[2024-06-24 17:00:26] 2024-06-24 15:00:15,026 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 17:00:26] 2024-06-24 15:00:15,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 17:00:26] 2024-06-24 15:00:15,033 | INFO     | did not find any defunct processes belonging to 3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:15,038 | INFO     | did not find any defunct processes belonging to 3627554
[2024-06-24 17:00:26] 2024-06-24 15:00:15,038 | INFO     | ready for new job
[2024-06-24 17:00:26] 2024-06-24 15:00:15,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 17:00:26] 2024-06-24 15:00:15,042 | INFO     | *************************************
[2024-06-24 17:00:26] 2024-06-24 15:00:15,042 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 17:00:26] 2024-06-24 15:00:15,042 | INFO     | *************************************
[2024-06-24 17:00:26] 2024-06-24 15:00:15,042 | INFO     | 
[2024-06-24 17:00:26] 2024-06-24 15:00:15,044 | INFO     | architecture information:
[2024-06-24 17:00:26] 2024-06-24 15:00:15,045 | INFO     | executing command: cat /etc/os-release
[2024-06-24 17:00:26] 2024-06-24 15:00:15,057 | INFO     | cat /etc/os-release:
[2024-06-24 17:00:26] NAME="CentOS Linux"
[2024-06-24 17:00:26] VERSION="7 (Core)"
[2024-06-24 17:00:26] ID="centos"
[2024-06-24 17:00:26] ID_LIKE="rhel fedora"
[2024-06-24 17:00:26] VERSION_ID="7"
[2024-06-24 17:00:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 17:00:26] ANSI_COLOR="0;31"
[2024-06-24 17:00:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 17:00:26] HOME_URL="https://www.centos.org/"
[2024-06-24 17:00:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 17:00:26] 
[2024-06-24 17:00:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 17:00:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 17:00:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 17:00:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 17:00:26] 
[2024-06-24 17:00:26] 2024-06-24 15:00:15,057 | INFO     | *************************************
[2024-06-24 17:00:26] 2024-06-24 15:00:15,559 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-24 17:00:26] 2024-06-24 15:00:15,577 | INFO     | sufficient remaining disk space (1683955384320 B)
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 17:00:26] 2024-06-24 15:00:15,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 17:00:26] 2024-06-24 15:00:15,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 17:00:26] 2024-06-24 15:00:15,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 17:00:26] 2024-06-24 15:00:16,135 | INFO     | all job control threads have been joined
[2024-06-24 17:00:26] 2024-06-24 15:00:16,167 | INFO     | all data control threads have been joined
[2024-06-24 17:00:26] 2024-06-24 15:00:16,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 17:00:26] 2024-06-24 15:00:16,346 | INFO     | aborting loop
[2024-06-24 17:00:26] 2024-06-24 15:00:16,582 | INFO     | [job] retrieve thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:16,751 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:16,799 | INFO     | all payload control threads have been joined
[2024-06-24 17:00:26] 2024-06-24 15:00:16,973 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,140 | INFO     | [job] control thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,154 | INFO     | [payload] validate_post thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,162 | INFO     | [payload] failed_post thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,169 | INFO     | [data] control thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,351 | INFO     | [job] job monitor thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,383 | INFO     | [job] validate thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,388 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,694 | INFO     | [data] copytool_out thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,806 | INFO     | [payload] control thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 17:00:26] 2024-06-24 15:00:17,958 | INFO     | [data] copytool_in thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:17,993 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:18,852 | INFO     | [job] queue monitor thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:19,952 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 17:00:26] 2024-06-24 15:00:21,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47956289819712)>', '<ExcThread(monitor, started 47956675806976)>']
[2024-06-24 17:00:26] 2024-06-24 15:00:21,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 17:00:26] 2024-06-24 15:00:21,607 | INFO     | [monitor] control thread has ended
[2024-06-24 17:00:26] 2024-06-24 15:00:26,211 | INFO     | all workflow threads have been joined
[2024-06-24 17:00:26] 2024-06-24 15:00:26,211 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 17:00:26] 2024-06-24 15:00:26,211 | INFO     | traces error code: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:26,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 17:00:26] 2024-06-24 15:00:26,288 [wrapper] ==== pilot stdout END ====
[2024-06-24 17:00:26] 2024-06-24 15:00:26,291 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 17:00:26] 2024-06-24 15:00:26,293 [wrapper] pilotpid: 3620088
[2024-06-24 17:00:26] 2024-06-24 15:00:26,295 [wrapper] Pilot exit status: 0
[2024-06-24 17:00:26] 2024-06-24 15:00:26,302 [wrapper] pandaids: 6241218712
[2024-06-24 17:00:26] 2024-06-24 15:00:26,337 [wrapper] cleanup supervisor_pilot  411805 3620089
[2024-06-24 17:00:26] 2024-06-24 15:00:26,339 [wrapper] Test setup, not cleaning
[2024-06-24 17:00:26] 2024-06-24 15:00:26,341 [wrapper] ==== wrapper stdout END ====
[2024-06-24 17:00:26] 2024-06-24 15:00:26,343 [wrapper] ==== wrapper stderr END ====
[2024-06-24 17:00:26] 2024-06-24 15:00:26,347 [wrapper] apfmon messages muted
[2024-06-24 17:00:26]  *** Error codes and diagnostics ***
[2024-06-24 17:00:26]     "exeErrorCode": 0,
[2024-06-24 17:00:26]     "exeErrorDiag": "",
[2024-06-24 17:00:26]     "pilotErrorCode": 0,
[2024-06-24 17:00:26]     "pilotErrorDiag": "",
[2024-06-24 17:00:26]  *** Listing of results directory ***
[2024-06-24 17:00:26] total 931964
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc    469766 Jun 22 08:39 pilot3.tar.gz
[2024-06-24 17:00:26] -rwx------ 1 boinc boinc     32308 Jun 22 08:49 runpilot2-wrapper.sh
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc      5654 Jun 22 08:49 queuedata.json
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc       100 Jun 24 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 17:00:26] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 04:59 run_atlas
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc       105 Jun 24 04:59 job.xml
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc 583252477 Jun 24 04:59 EVNT.38776201._000582.pool.root.1
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc      6455 Jun 24 04:59 init_data.xml
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc     17537 Jun 24 04:59 start_atlas.sh
[2024-06-24 17:00:26] drwxrwx--x 2 boinc boinc      4096 Jun 24 04:59 shared
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc    482534 Jun 24 04:59 input.tar.gz
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc         0 Jun 24 04:59 boinc_lockfile
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc      2631 Jun 24 04:59 pandaJob.out
[2024-06-24 17:00:26] -rw------- 1 boinc boinc       424 Jun 24 04:59 setup.sh.local
[2024-06-24 17:00:26] -rw------- 1 boinc boinc   1024662 Jun 24 04:59 agis_schedconf.cvmfs.json
[2024-06-24 17:00:26] -rw------- 1 boinc boinc   1321363 Jun 24 04:59 cric_ddmendpoints.json
[2024-06-24 17:00:26] drwx------ 4 boinc boinc      4096 Jun 24 04:59 pilot3
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc       533 Jun 24 16:59 boinc_task_state.xml
[2024-06-24 17:00:26] -rw------- 1 boinc boinc 353940732 Jun 24 16:59 HITS.38921007._053848.pool.root.1
[2024-06-24 17:00:26] -rw------- 1 boinc boinc        95 Jun 24 16:59 pilot_heartbeat.json
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc        29 Jun 24 16:59 wrapper_checkpoint.txt
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc      8192 Jun 24 16:59 boinc_mmap_file
[2024-06-24 17:00:26] -rw------- 1 boinc boinc      1041 Jun 24 17:00 memory_monitor_summary.json
[2024-06-24 17:00:26] -rw------- 1 boinc boinc         0 Jun 24 17:00 agis_ddmendpoints.agis.ALL.json
[2024-06-24 17:00:26] -rw------- 1 boinc boinc    684593 Jun 24 17:00 log.38921007._053848.job.log.tgz.1
[2024-06-24 17:00:26] -rw------- 1 boinc boinc      7759 Jun 24 17:00 heartbeat.json
[2024-06-24 17:00:26] -rw------- 1 boinc boinc      4345 Jun 24 17:00 pilotlog.txt
[2024-06-24 17:00:26] -rw------- 1 boinc boinc   6114098 Jun 24 17:00 log.38921007._053848.job.log.1
[2024-06-24 17:00:26] -rw------- 1 boinc boinc       357 Jun 24 17:00 output.list
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc       620 Jun 24 17:00 runtime_log
[2024-06-24 17:00:26] -rw------- 1 boinc boinc   6819840 Jun 24 17:00 result.tar.gz
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc     11410 Jun 24 17:00 runtime_log.err
[2024-06-24 17:00:26] -rw------- 1 boinc boinc       660 Jun 24 17:00 3DuKDmOk9e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4YnKDm8kALAo.diag
[2024-06-24 17:00:26] -rw-r--r-- 1 boinc boinc     21393 Jun 24 17:00 stderr.txt
[2024-06-24 17:00:26] HITS file was successfully produced:
[2024-06-24 17:00:26] -rw------- 1 boinc boinc 353940732 Jun 24 16:59 shared/HITS.pool.root.1
[2024-06-24 17:00:26]  *** Contents of shared directory: ***
[2024-06-24 17:00:26] total 922392
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc 583252477 Jun 24 04:59 ATLAS.root_0
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc     17537 Jun 24 04:59 start_atlas.sh
[2024-06-24 17:00:26] -rw-r--r-- 2 boinc boinc    482534 Jun 24 04:59 input.tar.gz
[2024-06-24 17:00:26] -rw------- 1 boinc boinc 353940732 Jun 24 16:59 HITS.pool.root.1
[2024-06-24 17:00:26] -rw------- 1 boinc boinc   6819840 Jun 24 17:00 result.tar.gz
17:00:28 (3615870): run_atlas exited; CPU time 168809.567884
17:00:28 (3615870): called boinc_finish(0)

</stderr_txt>
]]>

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