Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
18:37:11 (147793): wrapper (7.7.26015): starting
18:37:11 (147793): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 18:37:11] Arguments: --nthreads 12
[2024-06-22 18:37:11] Threads: 12
[2024-06-22 18:37:11] Checking for CVMFS
[2024-06-22 18:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 18:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 18:37:12] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 18:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 18:37:12] 2.10.1.0 2884 224848 110856 134185 0 153 31567886 45568000 19690 130560 0 1228478465 99.761 783697092 19123 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-22 18:37:12] CVMFS is ok
[2024-06-22 18:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 18:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 18:37:12] Further information can be found at the LHC@home message board.
[2024-06-22 18:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 18:37:12] Checking for apptainer binary...
[2024-06-22 18:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 18:37:12] Running /usr/bin/apptainer --version
[2024-06-22 18:37:12] apptainer version 1.3.2-1.el7
[2024-06-22 18:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 18:37:13] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2024-06-22 18:37:13] apptainer works
[2024-06-22 18:37:13] Set ATHENA_PROC_NUMBER=12
[2024-06-22 18:37:13] Set ATHENA_CORE_NUMBER=12
[2024-06-22 18:37:13] Starting ATLAS job with PandaID=6241068847
[2024-06-22 18:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 21:49:40]  *** The last 200 lines of the pilot log: ***
[2024-06-22 21:49:40] 2024-06-23 04:49:18,759 | INFO     | model: linear, x: [1719106675.0, 1719106736.0, 1719106797.0, 1719106858.0, 1719106919.0, 1719106980.0, 1719107041.0, 1719107102.0, 1719107163.0, 1719107224.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,759 | INFO     | sum of square deviations: 1931965474.7336922
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | sum of deviations: 98922111846.1956
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | mean x: 1719112256.9619565
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | mean y: 2657479.4565217393
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | -- intersect: -88020765911.58401
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | intersect: -88020765911.58401
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | chi2: 6.253735145395864
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | current chi2=6.253735145395864 (change=10.562292746948945 %)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,760 | INFO     | right removable region: 183
[2024-06-22 21:49:40] 2024-06-23 04:49:18,761 | INFO     | model: linear, x: [1719106980.0, 1719107041.0, 1719107102.0, 1719107163.0, 1719107224.0, 1719107285.0, 1719107346.0, 1719107407.0, 1719107468.0, 1719107529.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,761 | INFO     | sum of square deviations: 1931913624.7336922
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | sum of deviations: 34101244938.28264
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | mean x: 1719112561.9619565
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | mean y: 2697128.3260869565
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | -- intersect: -30342281964.631226
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | intersect: -30342281964.631226
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | chi2: 4.048162533537924
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | current chi2=4.048162533537924 (change=42.105259149983425 %)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | model: linear, x: [1719107285.0, 1719107346.0, 1719107407.0, 1719107468.0, 1719107529.0, 1719107590.0, 1719107651.0, 1719107712.0, 1719107773.0, 1719107834.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,762 | INFO     | sum of square deviations: 1778656918.636879
[2024-06-22 21:49:40] 2024-06-23 04:49:18,763 | INFO     | sum of deviations: -7088083225.033509
[2024-06-22 21:49:40] 2024-06-23 04:49:18,763 | INFO     | mean x: 1719112714.4748604
[2024-06-22 21:49:40] 2024-06-23 04:49:18,763 | INFO     | mean y: 2738111.6592178773
[2024-06-22 21:49:40] 2024-06-23 04:49:18,763 | INFO     | -- intersect: 6853533150.170378
[2024-06-22 21:49:40] 2024-06-23 04:49:18,763 | INFO     | intersect: 6853533150.170378
[2024-06-22 21:49:40] 2024-06-23 04:49:18,764 | INFO     | chi2: 2.3729881659102556
[2024-06-22 21:49:40] 2024-06-23 04:49:18,764 | INFO     | current chi2=2.3729881659102556 (change=41.38110448257215 %)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,764 | INFO     | model: linear, x: [1719107590.0, 1719107651.0, 1719107712.0, 1719107773.0, 1719107834.0, 1719107895.0, 1719107956.0, 1719108017.0, 1719108078.0, 1719108139.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,764 | INFO     | sum of square deviations: 1633725949.9770074
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | sum of deviations: -43157666382.55171
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | mean x: 1719112866.9885058
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | mean y: 2775987.224137931
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | -- intersect: 45416083885.33649
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | intersect: 45416083885.33649
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | chi2: 1.0296215601638434
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | current chi2=1.0296215601638434 (change=56.61075874902687 %)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | model: linear, x: [1719107895.0, 1719107956.0, 1719108017.0, 1719108078.0, 1719108139.0, 1719108202.0, 1719108262.0, 1719108323.0, 1719108383.0, 1719108444.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,765 | INFO     | sum of square deviations: 1496888156.2485163
[2024-06-22 21:49:40] 2024-06-23 04:49:18,766 | INFO     | sum of deviations: -46182588260.69822
[2024-06-22 21:49:40] 2024-06-23 04:49:18,766 | INFO     | mean x: 1719113019.5029585
[2024-06-22 21:49:40] 2024-06-23 04:49:18,766 | INFO     | mean y: 2779234.396449704
[2024-06-22 21:49:40] 2024-06-23 04:49:18,766 | INFO     | -- intersect: 53041537288.49505
[2024-06-22 21:49:40] 2024-06-23 04:49:18,766 | INFO     | intersect: 53041537288.49505
[2024-06-22 21:49:40] 2024-06-23 04:49:18,767 | INFO     | chi2: 0.9492511396933627
[2024-06-22 21:49:40] 2024-06-23 04:49:18,767 | INFO     | current chi2=0.9492511396933627 (change=7.805821437702934 %)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,767 | INFO     | left removable region: 40
[2024-06-22 21:49:40] 2024-06-23 04:49:18,767 | INFO     | model: linear, x: [1719109115.0, 1719109176.0, 1719109239.0, 1719109298.0, 1719109359.0, 1719109420.0, 1719109481.0, 1719109547.0, 1719109605.0, 1719109664.0, 1719
[2024-06-22 21:49:40] 2024-06-23 04:49:18,767 | INFO     | sum of square deviations: 906900051.1188821
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | sum of deviations: -11178717352.6993
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | mean x: 1719113446.5664337
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | mean y: 2765440.020979021
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | -- intersect: 21193064517.28032
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | intersect: 21193064517.28032
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | chi2: 0.092191670586435
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | -- intersect: 21193064517.28032
[2024-06-22 21:49:40] 2024-06-23 04:49:18,768 | INFO     | current memory leak: -12.33 B/s (using 143 data points, chi2=0.09)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | ..............................
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . Timing measurements:
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . get job = 0 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . initial setup = 2 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . payload setup = 8 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . stage-in = 0 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . payload execution = 11475 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . stage-out = 2 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | . log creation = 0 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,769 | INFO     | ..............................
[2024-06-22 21:49:40] 2024-06-23 04:49:18,837 | INFO     | 
[2024-06-22 21:49:40] 2024-06-23 04:49:18,837 | INFO     | job summary report
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | --------------------------------------------------
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | PanDA job id: 6241068847
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | task id: 40024014
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | errors: (none)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | pilot state: finished 
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | transexitcode: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:18,838 | INFO     | exeerrorcode: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | exeerrordiag: 
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | exitcode: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | exitmsg: OK
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | cpuconsumptiontime: 51951 s
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | nevents: 400
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | neventsw: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | pid: 158597
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | pgrp: 158597
[2024-06-22 21:49:40] 2024-06-23 04:49:18,839 | INFO     | corecount: 12
[2024-06-22 21:49:40] 2024-06-23 04:49:18,840 | INFO     | event service: False
[2024-06-22 21:49:40] 2024-06-23 04:49:18,840 | INFO     | sizes: {0: 2386894, 5: 2387100, 11: 2387156, 11488: 2416372, 11491: 2425382, 11497: 2425496}
[2024-06-22 21:49:40] 2024-06-23 04:49:18,840 | INFO     | --------------------------------------------------
[2024-06-22 21:49:40] 2024-06-23 04:49:18,840 | INFO     | 
[2024-06-22 21:49:40] 2024-06-23 04:49:18,840 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-22 21:49:40] 2024-06-23 04:49:18,869 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,869 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,869 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,869 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,871 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 21:49:40] 2024-06-23 04:49:18,872 | INFO     | job 6241068847 has completed (purged errors)
[2024-06-22 21:49:40] 2024-06-23 04:49:18,872 | INFO     | overall cleanup function is called
[2024-06-22 21:49:40] 2024-06-23 04:49:19,881 | INFO     | --- collectZombieJob: --- 10, [158597]
[2024-06-22 21:49:40] 2024-06-23 04:49:19,882 | INFO     | zombie collector waiting for pid 158597
[2024-06-22 21:49:40] 2024-06-23 04:49:19,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 21:49:40] 2024-06-23 04:49:20,271 | INFO     | 11515s have passed since pilot start
[2024-06-22 21:49:40] 2024-06-23 04:49:20,883 | INFO     | collected zombie processes
[2024-06-22 21:49:40] 2024-06-23 04:49:20,884 | INFO     | will now attempt to kill all subprocesses of pid=158597
[2024-06-22 21:49:40] 2024-06-23 04:49:21,160 | INFO     | process IDs to be killed: [158597] (in reverse order)
[2024-06-22 21:49:40] 2024-06-23 04:49:21,445 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 21:49:40] 2024-06-23 04:49:21,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 21:49:40] 2024-06-23 04:49:21,459 | INFO     | did not find any defunct processes belonging to 158597
[2024-06-22 21:49:40] 2024-06-23 04:49:21,466 | INFO     | did not find any defunct processes belonging to 158597
[2024-06-22 21:49:40] 2024-06-23 04:49:21,466 | INFO     | ready for new job
[2024-06-22 21:49:40] 2024-06-23 04:49:21,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 21:49:40] 2024-06-23 04:49:21,468 | INFO     | *************************************
[2024-06-22 21:49:40] 2024-06-23 04:49:21,468 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 21:49:40] 2024-06-23 04:49:21,469 | INFO     | *************************************
[2024-06-22 21:49:40] 2024-06-23 04:49:21,469 | INFO     | 
[2024-06-22 21:49:40] 2024-06-23 04:49:21,471 | INFO     | architecture information:
[2024-06-22 21:49:40] 2024-06-23 04:49:21,472 | INFO     | executing command: cat /etc/os-release
[2024-06-22 21:49:40] 2024-06-23 04:49:21,488 | INFO     | cat /etc/os-release:
[2024-06-22 21:49:40] NAME="CentOS Linux"
[2024-06-22 21:49:40] VERSION="7 (Core)"
[2024-06-22 21:49:40] ID="centos"
[2024-06-22 21:49:40] ID_LIKE="rhel fedora"
[2024-06-22 21:49:40] VERSION_ID="7"
[2024-06-22 21:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 21:49:40] ANSI_COLOR="0;31"
[2024-06-22 21:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 21:49:40] HOME_URL="https://www.centos.org/"
[2024-06-22 21:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 21:49:40] 
[2024-06-22 21:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 21:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 21:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 21:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 21:49:40] 
[2024-06-22 21:49:40] 2024-06-23 04:49:21,488 | INFO     | *************************************
[2024-06-22 21:49:40] 2024-06-23 04:49:21,990 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-22 21:49:40] 2024-06-23 04:49:22,046 | INFO     | sufficient remaining disk space (1525140160512 B)
[2024-06-22 21:49:40] 2024-06-23 04:49:22,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 21:49:40] 2024-06-23 04:49:22,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 21:49:40] 2024-06-23 04:49:22,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:49:40] 2024-06-23 04:49:22,048 | INFO     | aborting loop
[2024-06-22 21:49:40] 2024-06-23 04:49:22,049 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 21:49:40] 2024-06-23 04:49:22,050 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 21:49:40] 2024-06-23 04:49:22,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 21:49:40] 2024-06-23 04:49:22,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 21:49:40] 2024-06-23 04:49:22,565 | INFO     | all payload control threads have been joined
[2024-06-22 21:49:40] 2024-06-23 04:49:23,051 | INFO     | [job] retrieve thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:23,056 | INFO     | all data control threads have been joined
[2024-06-22 21:49:40] 2024-06-23 04:49:23,057 | INFO     | [job] job monitor thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:23,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 21:49:40] 2024-06-23 04:49:23,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 21:49:40] 2024-06-23 04:49:23,486 | INFO     | all job control threads have been joined
[2024-06-22 21:49:40] 2024-06-23 04:49:23,537 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:23,570 | INFO     | [payload] control thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:23,769 | INFO     | [payload] failed_post thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:23,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 21:49:40] 2024-06-23 04:49:24,061 | INFO     | [data] control thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,275 | INFO     | [payload] validate_post thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,448 | INFO     | [job] validate thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,449 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,466 | INFO     | [data] copytool_in thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,468 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,491 | INFO     | [job] control thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:24,853 | INFO     | [job] queue monitor thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:25,240 | INFO     | [data] copytool_out thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:27,305 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:32,646 | INFO     | job.realtimelogging is not enabled
[2024-06-22 21:49:40] 2024-06-23 04:49:33,646 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 21:49:40] 2024-06-23 04:49:34,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558776694592)>', '<ExcThread(monitor, started 140558349616896)>']
[2024-06-22 21:49:40] 2024-06-23 04:49:34,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 21:49:40] 2024-06-23 04:49:34,141 | INFO     | [monitor] control thread has ended
[2024-06-22 21:49:40] 2024-06-23 04:49:39,071 | INFO     | all workflow threads have been joined
[2024-06-22 21:49:40] 2024-06-23 04:49:39,071 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 21:49:40] 2024-06-23 04:49:39,072 | INFO     | traces error code: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:39,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 21:49:40] 2024-06-23 04:49:39,244 [wrapper] ==== pilot stdout END ====
[2024-06-22 21:49:40] 2024-06-23 04:49:39,248 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 21:49:40] 2024-06-23 04:49:39,251 [wrapper] pilotpid: 152024
[2024-06-22 21:49:40] 2024-06-23 04:49:39,255 [wrapper] Pilot exit status: 0
[2024-06-22 21:49:40] 2024-06-23 04:49:39,267 [wrapper] pandaids: 6241068847
[2024-06-22 21:49:40] 2024-06-23 04:49:39,581 [wrapper] cleanup supervisor_pilot  73533 152025
[2024-06-22 21:49:40] 2024-06-23 04:49:39,584 [wrapper] Test setup, not cleaning
[2024-06-22 21:49:40] 2024-06-23 04:49:39,587 [wrapper] ==== wrapper stdout END ====
[2024-06-22 21:49:40] 2024-06-23 04:49:39,589 [wrapper] ==== wrapper stderr END ====
[2024-06-22 21:49:40] 2024-06-23 04:49:39,596 [wrapper] apfmon messages muted
[2024-06-22 21:49:40]  *** Error codes and diagnostics ***
[2024-06-22 21:49:40]     "exeErrorCode": 0,
[2024-06-22 21:49:40]     "exeErrorDiag": "",
[2024-06-22 21:49:40]     "pilotErrorCode": 0,
[2024-06-22 21:49:40]     "pilotErrorDiag": "",
[2024-06-22 21:49:40]  *** Listing of results directory ***
[2024-06-22 21:49:40] total 842852
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc    469766 Jun 21 21:36 pilot3.tar.gz
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc      5654 Jun 21 22:01 queuedata.json
[2024-06-22 21:49:40] -rwx------ 1 boinc boinc     32308 Jun 21 22:02 runpilot2-wrapper.sh
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc       100 Jun 22 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 21:49:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 18:37 run_atlas
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc       105 Jun 22 18:37 job.xml
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc 599111422 Jun 22 18:37 EVNT.40024012._000040.pool.root.1
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc      6624 Jun 22 18:37 init_data.xml
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:37 start_atlas.sh
[2024-06-22 21:49:40] drwxrwx--x 2 boinc boinc      4096 Jun 22 18:37 shared
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc    482493 Jun 22 18:37 input.tar.gz
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc         0 Jun 22 18:37 boinc_lockfile
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc      2512 Jun 22 18:37 pandaJob.out
[2024-06-22 21:49:40] -rw------- 1 boinc boinc       424 Jun 22 18:37 setup.sh.local
[2024-06-22 21:49:40] -rw------- 1 boinc boinc   1026086 Jun 22 18:37 agis_schedconf.cvmfs.json
[2024-06-22 21:49:40] -rw------- 1 boinc boinc   1321363 Jun 22 18:37 cric_ddmendpoints.json
[2024-06-22 21:49:40] drwx------ 4 boinc boinc      4096 Jun 22 18:37 pilot3
[2024-06-22 21:49:40] -rw------- 1 boinc boinc 257562875 Jun 22 21:48 HITS.40024014._001625.pool.root.1
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc       531 Jun 22 21:48 boinc_task_state.xml
[2024-06-22 21:49:40] -rw------- 1 boinc boinc      1071 Jun 22 21:49 memory_monitor_summary.json
[2024-06-22 21:49:40] -rw------- 1 boinc boinc        95 Jun 22 21:49 pilot_heartbeat.json
[2024-06-22 21:49:40] -rw------- 1 boinc boinc         0 Jun 22 21:49 agis_ddmendpoints.agis.ALL.json
[2024-06-22 21:49:40] -rw------- 1 boinc boinc    437079 Jun 22 21:49 log.40024014._001625.job.log.tgz.1
[2024-06-22 21:49:40] -rw------- 1 boinc boinc      7792 Jun 22 21:49 heartbeat.json
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc      8192 Jun 22 21:49 boinc_mmap_file
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc        28 Jun 22 21:49 wrapper_checkpoint.txt
[2024-06-22 21:49:40] -rw------- 1 boinc boinc      4405 Jun 22 21:49 pilotlog.txt
[2024-06-22 21:49:40] -rw------- 1 boinc boinc    999246 Jun 22 21:49 log.40024014._001625.job.log.1
[2024-06-22 21:49:40] -rw------- 1 boinc boinc       357 Jun 22 21:49 output.list
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc       620 Jun 22 21:49 runtime_log
[2024-06-22 21:49:40] -rw------- 1 boinc boinc   1454080 Jun 22 21:49 result.tar.gz
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc     11287 Jun 22 21:49 runtime_log.err
[2024-06-22 21:49:40] -rw------- 1 boinc boinc       659 Jun 22 21:49 idqNDmE47e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmaTnKDmZJaWDo.diag
[2024-06-22 21:49:40] -rw-r--r-- 1 boinc boinc     21927 Jun 22 21:49 stderr.txt
[2024-06-22 21:49:40] HITS file was successfully produced:
[2024-06-22 21:49:40] -rw------- 1 boinc boinc 257562875 Jun 22 21:48 shared/HITS.pool.root.1
[2024-06-22 21:49:40]  *** Contents of shared directory: ***
[2024-06-22 21:49:40] total 838520
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc 599111422 Jun 22 18:37 ATLAS.root_0
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:37 start_atlas.sh
[2024-06-22 21:49:40] -rw-r--r-- 2 boinc boinc    482493 Jun 22 18:37 input.tar.gz
[2024-06-22 21:49:40] -rw------- 1 boinc boinc 257562875 Jun 22 21:48 HITS.pool.root.1
[2024-06-22 21:49:40] -rw------- 1 boinc boinc   1454080 Jun 22 21:49 result.tar.gz
21:49:42 (147793): run_atlas exited; CPU time 51484.336641
21:49:42 (147793): called boinc_finish(0)

</stderr_txt>
]]>

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