Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:21:20 (4067695): wrapper (7.7.26015): starting
10:21:20 (4067695): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 10:21:20] Arguments: --nthreads 4
[2024-06-24 10:21:20] Threads: 4
[2024-06-24 10:21:20] Checking for CVMFS
[2024-06-24 10:21:20] No cvmfs_config command found, will try listing directly
[2024-06-24 10:21:20] CVMFS is ok
[2024-06-24 10:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 10:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 10:21:20] Further information can be found at the LHC@home message board.
[2024-06-24 10:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 10:21:20] Checking for apptainer binary...
[2024-06-24 10:21:20] which: no apptainer in ((null))
[2024-06-24 10:21:20] apptainer is not installed, using version from CVMFS
[2024-06-24 10:21:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 10:21:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-24 10:21:21] apptainer works
[2024-06-24 10:21:21] Set ATHENA_PROC_NUMBER=4
[2024-06-24 10:21:21] Set ATHENA_CORE_NUMBER=4
[2024-06-24 10:21:21] Starting ATLAS job with PandaID=6240677195
[2024-06-24 10:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 21:47:23]  *** The last 200 lines of the pilot log: ***
[2024-06-24 21:47:23] 2024-06-24 19:47:01,535 | INFO     | model: linear, x: [1719217314.0, 1719217375.0, 1719217436.0, 1719217497.0, 1719217558.0, 1719217619.0, 1719217680.0, 1719217741.0, 1719217802.0, 1719217863.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,536 | INFO     | sum of square deviations: 94941733612.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,547 | INFO     | sum of deviations: 209860076045.50006
[2024-06-24 21:47:23] 2024-06-24 19:47:01,547 | INFO     | mean x: 1719237840.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,547 | INFO     | mean y: 2382147.316023739
[2024-06-24 21:47:23] 2024-06-24 19:47:01,547 | INFO     | -- intersect: -3797836894.609376
[2024-06-24 21:47:23] 2024-06-24 19:47:01,547 | INFO     | intersect: -3797836894.609376
[2024-06-24 21:47:23] 2024-06-24 19:47:01,548 | INFO     | chi2: 3.714553401893778
[2024-06-24 21:47:23] 2024-06-24 19:47:01,548 | INFO     | model: linear, x: [1719217314.0, 1719217375.0, 1719217436.0, 1719217497.0, 1719217558.0, 1719217619.0, 1719217680.0, 1719217741.0, 1719217802.0, 1719217863.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,548 | INFO     | sum of square deviations: 92844419870.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,554 | INFO     | sum of deviations: 207812321814.00003
[2024-06-24 21:47:23] 2024-06-24 19:47:01,555 | INFO     | mean x: 1719237688.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,555 | INFO     | mean y: 2381998.4170403588
[2024-06-24 21:47:23] 2024-06-24 19:47:01,555 | INFO     | -- intersect: -3845762846.4069376
[2024-06-24 21:47:23] 2024-06-24 19:47:01,555 | INFO     | intersect: -3845762846.4069376
[2024-06-24 21:47:23] 2024-06-24 19:47:01,556 | INFO     | chi2: 3.715115424236119
[2024-06-24 21:47:23] 2024-06-24 19:47:01,556 | INFO     | current chi2=3.715115424236119 (change=-0.015130280319963307 %)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,556 | INFO     | right removable region: 668
[2024-06-24 21:47:23] 2024-06-24 19:47:01,557 | INFO     | model: linear, x: [1719217619.0, 1719217680.0, 1719217741.0, 1719217802.0, 1719217863.0, 1719217924.0, 1719217985.0, 1719218046.0, 1719218107.0, 1719218168.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,557 | INFO     | sum of square deviations: 92844419870.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,563 | INFO     | sum of deviations: 55000207323.00001
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | mean x: 1719237993.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | mean y: 2393395.331838565
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | -- intersect: -1016067877.6771199
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | intersect: -1016067877.6771199
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | chi2: 1.4619306046930114
[2024-06-24 21:47:23] 2024-06-24 19:47:01,564 | INFO     | current chi2=1.4619306046930114 (change=60.64316631044582 %)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,565 | INFO     | model: linear, x: [1719217924.0, 1719217985.0, 1719218046.0, 1719218107.0, 1719218168.0, 1719218229.0, 1719218290.0, 1719218351.0, 1719218412.0, 1719218473.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,565 | INFO     | sum of square deviations: 90778222990.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,571 | INFO     | sum of deviations: -60432103694.49996
[2024-06-24 21:47:23] 2024-06-24 19:47:01,571 | INFO     | mean x: 1719238145.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,571 | INFO     | mean y: 2401914.856927711
[2024-06-24 21:47:23] 2024-06-24 19:47:01,571 | INFO     | -- intersect: 1146918457.065966
[2024-06-24 21:47:23] 2024-06-24 19:47:01,571 | INFO     | intersect: 1146918457.065966
[2024-06-24 21:47:23] 2024-06-24 19:47:01,572 | INFO     | chi2: 0.3151182365475711
[2024-06-24 21:47:23] 2024-06-24 19:47:01,572 | INFO     | current chi2=0.3151182365475711 (change=78.44506192455405 %)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,572 | INFO     | model: linear, x: [1719218229.0, 1719218290.0, 1719218351.0, 1719218412.0, 1719218473.0, 1719218534.0, 1719218595.0, 1719218656.0, 1719218717.0, 1719218778.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,573 | INFO     | sum of square deviations: 88742910410.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,578 | INFO     | sum of deviations: -73538703171.00003
[2024-06-24 21:47:23] 2024-06-24 19:47:01,578 | INFO     | mean x: 1719238298.0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,578 | INFO     | mean y: 2402891.9559939303
[2024-06-24 21:47:23] 2024-06-24 19:47:01,578 | INFO     | -- intersect: 1427086331.9369128
[2024-06-24 21:47:23] 2024-06-24 19:47:01,579 | INFO     | intersect: 1427086331.9369128
[2024-06-24 21:47:23] 2024-06-24 19:47:01,579 | INFO     | chi2: 0.2704161555935115
[2024-06-24 21:47:23] 2024-06-24 19:47:01,579 | INFO     | current chi2=0.2704161555935115 (change=14.185812107802667 %)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,579 | INFO     | left removable region: 30
[2024-06-24 21:47:23] 2024-06-24 19:47:01,580 | INFO     | model: linear, x: [1719219144.0, 1719219205.0, 1719219266.0, 1719219327.0, 1719219388.0, 1719219449.0, 1719219510.0, 1719219571.0, 1719219632.0, 1719219693.0, 1719
[2024-06-24 21:47:23] 2024-06-24 19:47:01,580 | INFO     | sum of square deviations: 80526605659.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,586 | INFO     | sum of deviations: -23114597538.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,586 | INFO     | mean x: 1719238572.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,586 | INFO     | mean y: 2398934.5
[2024-06-24 21:47:23] 2024-06-24 19:47:01,586 | INFO     | -- intersect: 495894312.214515
[2024-06-24 21:47:23] 2024-06-24 19:47:01,586 | INFO     | intersect: 495894312.214515
[2024-06-24 21:47:23] 2024-06-24 19:47:01,587 | INFO     | chi2: 0.2062854168482777
[2024-06-24 21:47:23] 2024-06-24 19:47:01,587 | INFO     | -- intersect: 495894312.214515
[2024-06-24 21:47:23] 2024-06-24 19:47:01,588 | INFO     | current memory leak: -0.29 B/s (using 638 data points, chi2=0.21)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | ..............................
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . Timing measurements:
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . get job = 0 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . initial setup = 1 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . payload setup = 5 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . stage-in = 0 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . payload execution = 41101 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,589 | INFO     | . stage-out = 0 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,590 | INFO     | . log creation = 0 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,590 | INFO     | ..............................
[2024-06-24 21:47:23] 2024-06-24 19:47:01,648 | WARNING  | process 4079110 is no longer using CPU - aborting
[2024-06-24 21:47:23] 2024-06-24 19:47:01,652 | INFO     | aborting job monitoring since job object (job id=6240677195) has expired
[2024-06-24 21:47:23] 2024-06-24 19:47:01,812 | INFO     | 
[2024-06-24 21:47:23] 2024-06-24 19:47:01,812 | INFO     | job summary report
[2024-06-24 21:47:23] 2024-06-24 19:47:01,812 | INFO     | --------------------------------------------------
[2024-06-24 21:47:23] 2024-06-24 19:47:01,812 | INFO     | PanDA job id: 6240677195
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | task id: 38921007
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | errors: (none)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | pilot state: finished 
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | transexitcode: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | exeerrorcode: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | exeerrordiag: 
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | exitcode: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | exitmsg: OK
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | cpuconsumptiontime: 161240 s
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | nevents: 400
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | neventsw: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | pid: 4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:01,813 | INFO     | pgrp: 4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | corecount: 4
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | event service: False
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | sizes: {0: 2386949, 1: 2387148, 4: 2387354, 11: 2387382, 41110: 2430860, 41111: 2439842, 41112: 2440026, 41118: 2440196}
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | --------------------------------------------------
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | 
[2024-06-24 21:47:23] 2024-06-24 19:47:01,814 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-24 21:47:23] 2024-06-24 19:47:01,833 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,834 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,834 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,834 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 21:47:23] 2024-06-24 19:47:01,836 | INFO     | job 6240677195 has completed (purged errors)
[2024-06-24 21:47:23] 2024-06-24 19:47:01,837 | INFO     | overall cleanup function is called
[2024-06-24 21:47:23] 2024-06-24 19:47:02,844 | INFO     | --- collectZombieJob: --- 10, [4079110]
[2024-06-24 21:47:23] 2024-06-24 19:47:02,844 | INFO     | zombie collector waiting for pid 4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:02,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 21:47:23] 2024-06-24 19:47:03,849 | INFO     | collected zombie processes
[2024-06-24 21:47:23] 2024-06-24 19:47:03,849 | INFO     | will now attempt to kill all subprocesses of pid=4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:03,947 | INFO     | process IDs to be killed: [4079110] (in reverse order)
[2024-06-24 21:47:23] 2024-06-24 19:47:04,004 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 21:47:23] 2024-06-24 19:47:04,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 21:47:23] 2024-06-24 19:47:04,008 | INFO     | did not find any defunct processes belonging to 4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:04,010 | INFO     | did not find any defunct processes belonging to 4079110
[2024-06-24 21:47:23] 2024-06-24 19:47:04,011 | INFO     | ready for new job
[2024-06-24 21:47:23] 2024-06-24 19:47:04,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 21:47:23] 2024-06-24 19:47:04,013 | INFO     | *************************************
[2024-06-24 21:47:23] 2024-06-24 19:47:04,013 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 21:47:23] 2024-06-24 19:47:04,013 | INFO     | *************************************
[2024-06-24 21:47:23] 2024-06-24 19:47:04,013 | INFO     | 
[2024-06-24 21:47:23] 2024-06-24 19:47:04,015 | INFO     | architecture information:
[2024-06-24 21:47:23] 2024-06-24 19:47:04,015 | INFO     | executing command: cat /etc/os-release
[2024-06-24 21:47:23] 2024-06-24 19:47:04,025 | INFO     | cat /etc/os-release:
[2024-06-24 21:47:23] NAME="CentOS Linux"
[2024-06-24 21:47:23] VERSION="7 (Core)"
[2024-06-24 21:47:23] ID="centos"
[2024-06-24 21:47:23] ID_LIKE="rhel fedora"
[2024-06-24 21:47:23] VERSION_ID="7"
[2024-06-24 21:47:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 21:47:23] ANSI_COLOR="0;31"
[2024-06-24 21:47:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 21:47:23] HOME_URL="https://www.centos.org/"
[2024-06-24 21:47:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 21:47:23] 
[2024-06-24 21:47:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 21:47:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 21:47:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 21:47:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 21:47:23] 
[2024-06-24 21:47:23] 2024-06-24 19:47:04,026 | INFO     | *************************************
[2024-06-24 21:47:23] 2024-06-24 19:47:04,529 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-24 21:47:23] 2024-06-24 19:47:04,545 | INFO     | sufficient remaining disk space (1686337748992 B)
[2024-06-24 21:47:23] 2024-06-24 19:47:04,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 21:47:23] 2024-06-24 19:47:04,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 21:47:23] 2024-06-24 19:47:04,546 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 21:47:23] 2024-06-24 19:47:04,546 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 21:47:23] 2024-06-24 19:47:04,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 21:47:23] 2024-06-24 19:47:04,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 21:47:23] 2024-06-24 19:47:05,086 | INFO     | all job control threads have been joined
[2024-06-24 21:47:23] 2024-06-24 19:47:05,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 21:47:23] 2024-06-24 19:47:05,157 | INFO     | aborting loop
[2024-06-24 21:47:23] 2024-06-24 19:47:05,212 | INFO     | all data control threads have been joined
[2024-06-24 21:47:23] 2024-06-24 19:47:05,551 | INFO     | [job] retrieve thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:05,640 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:05,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 21:47:23] 2024-06-24 19:47:05,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 21:47:23] 2024-06-24 19:47:05,841 | INFO     | [job] validate thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:05,907 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:05,963 | INFO     | all payload control threads have been joined
[2024-06-24 21:47:23] 2024-06-24 19:47:06,052 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,089 | INFO     | [job] control thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,162 | INFO     | [job] job monitor thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,217 | INFO     | [data] control thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,226 | INFO     | [payload] failed_post thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,399 | INFO     | [payload] validate_post thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,640 | INFO     | [data] copytool_in thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:06,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 21:47:23] 2024-06-24 19:47:06,968 | INFO     | [payload] control thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:07,663 | INFO     | [job] queue monitor thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:07,738 | INFO     | [data] copytool_out thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:09,822 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:15,312 | INFO     | job.realtimelogging is not enabled
[2024-06-24 21:47:23] 2024-06-24 19:47:16,317 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 21:47:23] 2024-06-24 19:47:17,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47285652038720)>', '<ExcThread(monitor, started 47286719612672)>']
[2024-06-24 21:47:23] 2024-06-24 19:47:18,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 21:47:23] 2024-06-24 19:47:18,615 | INFO     | [monitor] control thread has ended
[2024-06-24 21:47:23] 2024-06-24 19:47:22,898 | INFO     | all workflow threads have been joined
[2024-06-24 21:47:23] 2024-06-24 19:47:22,898 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 21:47:23] 2024-06-24 19:47:22,898 | INFO     | traces error code: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:22,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 21:47:23] 2024-06-24 19:47:22,982 [wrapper] ==== pilot stdout END ====
[2024-06-24 21:47:23] 2024-06-24 19:47:22,984 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 21:47:23] 2024-06-24 19:47:22,986 [wrapper] pilotpid: 4071985
[2024-06-24 21:47:23] 2024-06-24 19:47:22,987 [wrapper] Pilot exit status: 0
[2024-06-24 21:47:23] 2024-06-24 19:47:22,994 [wrapper] pandaids: 6240677195
[2024-06-24 21:47:23] 2024-06-24 19:47:23,030 [wrapper] cleanup supervisor_pilot  779493 4071986
[2024-06-24 21:47:23] 2024-06-24 19:47:23,032 [wrapper] Test setup, not cleaning
[2024-06-24 21:47:23] 2024-06-24 19:47:23,033 [wrapper] ==== wrapper stdout END ====
[2024-06-24 21:47:23] 2024-06-24 19:47:23,035 [wrapper] ==== wrapper stderr END ====
[2024-06-24 21:47:23] 2024-06-24 19:47:23,038 [wrapper] apfmon messages muted
[2024-06-24 21:47:23]  *** Error codes and diagnostics ***
[2024-06-24 21:47:23]     "exeErrorCode": 0,
[2024-06-24 21:47:23]     "exeErrorDiag": "",
[2024-06-24 21:47:23]     "pilotErrorCode": 0,
[2024-06-24 21:47:23]     "pilotErrorDiag": "",
[2024-06-24 21:47:23]  *** Listing of results directory ***
[2024-06-24 21:47:23] total 930012
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc    469766 Jun 22 02:37 pilot3.tar.gz
[2024-06-24 21:47:23] -rwx------ 1 boinc boinc     32308 Jun 22 03:05 runpilot2-wrapper.sh
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc      5654 Jun 22 03:05 queuedata.json
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc       100 Jun 24 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 21:47:23] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 10:21 run_atlas
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc       105 Jun 24 10:21 job.xml
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc 582761021 Jun 24 10:21 EVNT.38776201._000992.pool.root.1
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc     17537 Jun 24 10:21 start_atlas.sh
[2024-06-24 21:47:23] drwxrwx--x 2 boinc boinc      4096 Jun 24 10:21 shared
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc    482524 Jun 24 10:21 input.tar.gz
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc      6455 Jun 24 10:21 init_data.xml
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc         0 Jun 24 10:21 boinc_lockfile
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc      2631 Jun 24 10:21 pandaJob.out
[2024-06-24 21:47:23] -rw------- 1 boinc boinc       424 Jun 24 10:21 setup.sh.local
[2024-06-24 21:47:23] -rw------- 1 boinc boinc   1018482 Jun 24 10:21 agis_schedconf.cvmfs.json
[2024-06-24 21:47:23] -rw------- 1 boinc boinc   1321363 Jun 24 10:21 cric_ddmendpoints.json
[2024-06-24 21:47:23] drwx------ 4 boinc boinc      4096 Jun 24 10:21 pilot3
[2024-06-24 21:47:23] -rw------- 1 boinc boinc 355022135 Jun 24 21:46 HITS.38921007._053523.pool.root.1
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc       533 Jun 24 21:46 boinc_task_state.xml
[2024-06-24 21:47:23] -rw------- 1 boinc boinc        95 Jun 24 21:46 pilot_heartbeat.json
[2024-06-24 21:47:23] -rw------- 1 boinc boinc      1041 Jun 24 21:46 memory_monitor_summary.json
[2024-06-24 21:47:23] -rw------- 1 boinc boinc         0 Jun 24 21:46 agis_ddmendpoints.agis.ALL.json
[2024-06-24 21:47:23] -rw------- 1 boinc boinc    655071 Jun 24 21:46 log.38921007._053523.job.log.tgz.1
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc      8192 Jun 24 21:47 boinc_mmap_file
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc        29 Jun 24 21:47 wrapper_checkpoint.txt
[2024-06-24 21:47:23] -rw------- 1 boinc boinc      7762 Jun 24 21:47 heartbeat.json
[2024-06-24 21:47:23] -rw------- 1 boinc boinc      4417 Jun 24 21:47 pilotlog.txt
[2024-06-24 21:47:23] -rw------- 1 boinc boinc   4856007 Jun 24 21:47 log.38921007._053523.job.log.1
[2024-06-24 21:47:23] -rw------- 1 boinc boinc       357 Jun 24 21:47 output.list
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc       620 Jun 24 21:47 runtime_log
[2024-06-24 21:47:23] -rw------- 1 boinc boinc   5529600 Jun 24 21:47 result.tar.gz
[2024-06-24 21:47:23] -rw------- 1 boinc boinc       661 Jun 24 21:47 v5WLDmhN4e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmJJnKDmXBNbtm.diag
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc     11410 Jun 24 21:47 runtime_log.err
[2024-06-24 21:47:23] -rw-r--r-- 1 boinc boinc     21385 Jun 24 21:47 stderr.txt
[2024-06-24 21:47:23] HITS file was successfully produced:
[2024-06-24 21:47:23] -rw------- 1 boinc boinc 355022135 Jun 24 21:46 shared/HITS.pool.root.1
[2024-06-24 21:47:23]  *** Contents of shared directory: ***
[2024-06-24 21:47:23] total 921708
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc 582761021 Jun 24 10:21 ATLAS.root_0
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc     17537 Jun 24 10:21 start_atlas.sh
[2024-06-24 21:47:23] -rw-r--r-- 2 boinc boinc    482524 Jun 24 10:21 input.tar.gz
[2024-06-24 21:47:23] -rw------- 1 boinc boinc 355022135 Jun 24 21:46 HITS.pool.root.1
[2024-06-24 21:47:23] -rw------- 1 boinc boinc   5529600 Jun 24 21:47 result.tar.gz
21:47:24 (4067695): run_atlas exited; CPU time 160894.533987
21:47:24 (4067695): called boinc_finish(0)

</stderr_txt>
]]>

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