Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:43:37 (3150956): wrapper (7.7.26015): starting
03:43:37 (3150956): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 03:43:37] Arguments: --nthreads 4
[2024-06-24 03:43:37] Threads: 4
[2024-06-24 03:43:37] Checking for CVMFS
[2024-06-24 03:43:37] No cvmfs_config command found, will try listing directly
[2024-06-24 03:43:37] CVMFS is ok
[2024-06-24 03:43:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-24 03:43:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-24 03:43:37] Further information can be found at the LHC@home message board.
[2024-06-24 03:43:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 03:43:37] Checking for apptainer binary...
[2024-06-24 03:43:37] which: no apptainer in ((null))
[2024-06-24 03:43:37] apptainer is not installed, using version from CVMFS
[2024-06-24 03:43:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 03:43:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-24 03:43:38] apptainer works
[2024-06-24 03:43:38] Set ATHENA_PROC_NUMBER=4
[2024-06-24 03:43:38] Set ATHENA_CORE_NUMBER=4
[2024-06-24 03:43:38] Starting ATLAS job with PandaID=6240646774
[2024-06-24 03:43:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 18:33:51]  *** The last 200 lines of the pilot log: ***
[2024-06-24 18:33:51] 2024-06-24 16:33:30,385 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 18:33:51] 2024-06-24 16:33:30,385 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 18:33:51] 2024-06-24 16:33:30,402 | INFO     | fitting pss+swap vs Time
[2024-06-24 18:33:51] 2024-06-24 16:33:30,403 | INFO     | model: linear, x: [1719193452.0, 1719193513.0, 1719193574.0, 1719193635.0, 1719193696.0, 1719193757.0, 1719193818.0, 1719193879.0, 1719193940.0, 1719194001.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,403 | INFO     | sum of square deviations: 207731336750.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,423 | INFO     | sum of deviations: 421142817820.00006
[2024-06-24 18:33:51] 2024-06-24 16:33:30,423 | INFO     | mean x: 1719220109.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,423 | INFO     | mean y: 2363107.373714286
[2024-06-24 18:33:51] 2024-06-24 16:33:30,423 | INFO     | -- intersect: -3483086957.5263643
[2024-06-24 18:33:51] 2024-06-24 16:33:30,423 | INFO     | intersect: -3483086957.5263643
[2024-06-24 18:33:51] 2024-06-24 16:33:30,425 | INFO     | chi2: 4.302522722921073
[2024-06-24 18:33:51] 2024-06-24 16:33:30,426 | INFO     | model: linear, x: [1719193452.0, 1719193513.0, 1719193574.0, 1719193635.0, 1719193696.0, 1719193757.0, 1719193818.0, 1719193879.0, 1719193940.0, 1719194001.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,426 | INFO     | sum of square deviations: 204190535477.5
[2024-06-24 18:33:51] 2024-06-24 16:33:30,446 | INFO     | sum of deviations: 472785689819.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,446 | INFO     | mean x: 1719219956.5
[2024-06-24 18:33:51] 2024-06-24 16:33:30,446 | INFO     | mean y: 2365320.6344827586
[2024-06-24 18:33:51] 2024-06-24 16:33:30,446 | INFO     | -- intersect: -3978341185.588523
[2024-06-24 18:33:51] 2024-06-24 16:33:30,447 | INFO     | intersect: -3978341185.588523
[2024-06-24 18:33:51] 2024-06-24 16:33:30,448 | INFO     | chi2: 3.5488246328992386
[2024-06-24 18:33:51] 2024-06-24 16:33:30,448 | INFO     | current chi2=3.5488246328992386 (change=17.517585346071872 %)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,448 | INFO     | right removable region: 869
[2024-06-24 18:33:51] 2024-06-24 16:33:30,449 | INFO     | model: linear, x: [1719193757.0, 1719193818.0, 1719193879.0, 1719193940.0, 1719194001.0, 1719194062.0, 1719194123.0, 1719194184.0, 1719194245.0, 1719194306.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,450 | INFO     | sum of square deviations: 204190535477.5
[2024-06-24 18:33:51] 2024-06-24 16:33:30,468 | INFO     | sum of deviations: 224740314266.99994
[2024-06-24 18:33:51] 2024-06-24 16:33:30,469 | INFO     | mean x: 1719220261.5
[2024-06-24 18:33:51] 2024-06-24 16:33:30,469 | INFO     | mean y: 2371559.7103448277
[2024-06-24 18:33:51] 2024-06-24 16:33:30,469 | INFO     | -- intersect: -1889871393.4713874
[2024-06-24 18:33:51] 2024-06-24 16:33:30,469 | INFO     | intersect: -1889871393.4713874
[2024-06-24 18:33:51] 2024-06-24 16:33:30,470 | INFO     | chi2: 2.1586588340051462
[2024-06-24 18:33:51] 2024-06-24 16:33:30,471 | INFO     | current chi2=2.1586588340051462 (change=49.82806662460605 %)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,471 | INFO     | model: linear, x: [1719194062.0, 1719194123.0, 1719194184.0, 1719194245.0, 1719194306.0, 1719194367.0, 1719194428.0, 1719194489.0, 1719194550.0, 1719194611.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,472 | INFO     | sum of square deviations: 200690200080.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,491 | INFO     | sum of deviations: 79997438071.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,491 | INFO     | mean x: 1719220414.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,491 | INFO     | mean y: 2377865.667052023
[2024-06-24 18:33:51] 2024-06-24 16:33:30,492 | INFO     | -- intersect: -682923302.7235315
[2024-06-24 18:33:51] 2024-06-24 16:33:30,492 | INFO     | intersect: -682923302.7235315
[2024-06-24 18:33:51] 2024-06-24 16:33:30,493 | INFO     | chi2: 1.1083040926709833
[2024-06-24 18:33:51] 2024-06-24 16:33:30,493 | INFO     | current chi2=1.1083040926709833 (change=48.657746411245036 %)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,494 | INFO     | model: linear, x: [1719194367.0, 1719194428.0, 1719194489.0, 1719194550.0, 1719194611.0, 1719194672.0, 1719194733.0, 1719194794.0, 1719194855.0, 1719194916.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,495 | INFO     | sum of square deviations: 197230097995.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,516 | INFO     | sum of deviations: 40661193217.99999
[2024-06-24 18:33:51] 2024-06-24 16:33:30,516 | INFO     | mean x: 1719220566.5
[2024-06-24 18:33:51] 2024-06-24 16:33:30,516 | INFO     | mean y: 2379592.0906976745
[2024-06-24 18:33:51] 2024-06-24 16:33:30,516 | INFO     | -- intersect: -352056978.94719785
[2024-06-24 18:33:51] 2024-06-24 16:33:30,516 | INFO     | intersect: -352056978.94719785
[2024-06-24 18:33:51] 2024-06-24 16:33:30,518 | INFO     | chi2: 0.8766513182227575
[2024-06-24 18:33:51] 2024-06-24 16:33:30,518 | INFO     | current chi2=0.8766513182227575 (change=20.901553642191175 %)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,518 | INFO     | left removable region: 30
[2024-06-24 18:33:51] 2024-06-24 16:33:30,519 | INFO     | model: linear, x: [1719195282.0, 1719195343.0, 1719195404.0, 1719195465.0, 1719195526.0, 1719195587.0, 1719195648.0, 1719195709.0, 1719195770.0, 1719195831.0, 1719
[2024-06-24 18:33:51] 2024-06-24 16:33:30,519 | INFO     | sum of square deviations: 183131768540.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,537 | INFO     | sum of deviations: 155326518386.99997
[2024-06-24 18:33:51] 2024-06-24 16:33:30,537 | INFO     | mean x: 1719220841.0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,537 | INFO     | mean y: 2379078.5220500594
[2024-06-24 18:33:51] 2024-06-24 16:33:30,537 | INFO     | -- intersect: -1455809141.3583934
[2024-06-24 18:33:51] 2024-06-24 16:33:30,537 | INFO     | intersect: -1455809141.3583934
[2024-06-24 18:33:51] 2024-06-24 16:33:30,539 | INFO     | chi2: 0.008872843500301724
[2024-06-24 18:33:51] 2024-06-24 16:33:30,539 | INFO     | -- intersect: -1455809141.3583934
[2024-06-24 18:33:51] 2024-06-24 16:33:30,539 | INFO     | current memory leak: 0.85 B/s (using 839 data points, chi2=0.01)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,540 | INFO     | ..............................
[2024-06-24 18:33:51] 2024-06-24 16:33:30,540 | INFO     | . Timing measurements:
[2024-06-24 18:33:51] 2024-06-24 16:33:30,540 | INFO     | . get job = 0 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,540 | INFO     | . initial setup = 1 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | . payload setup = 5 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | . stage-in = 0 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | . payload execution = 53348 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | . stage-out = 1 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | . log creation = 0 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,541 | INFO     | ..............................
[2024-06-24 18:33:51] 2024-06-24 16:33:30,655 | INFO     | 
[2024-06-24 18:33:51] 2024-06-24 16:33:30,655 | INFO     | job summary report
[2024-06-24 18:33:51] 2024-06-24 16:33:30,655 | INFO     | --------------------------------------------------
[2024-06-24 18:33:51] 2024-06-24 16:33:30,655 | INFO     | PanDA job id: 6240646774
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | task id: 38921013
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | errors: (none)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | pilot state: finished 
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | transexitcode: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | exeerrorcode: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,656 | INFO     | exeerrordiag: 
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | exitcode: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | exitmsg: OK
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | cpuconsumptiontime: 208243 s
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | nevents: 400
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | neventsw: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | pid: 3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | pgrp: 3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:30,657 | INFO     | corecount: 4
[2024-06-24 18:33:51] 2024-06-24 16:33:30,658 | INFO     | event service: False
[2024-06-24 18:33:51] 2024-06-24 16:33:30,658 | INFO     | sizes: {0: 2386994, 4: 2387200, 11: 2387228, 53357: 2436248, 53359: 2445230, 53361: 2445286, 53369: 2445584}
[2024-06-24 18:33:51] 2024-06-24 16:33:30,658 | INFO     | --------------------------------------------------
[2024-06-24 18:33:51] 2024-06-24 16:33:30,658 | INFO     | 
[2024-06-24 18:33:51] 2024-06-24 16:33:30,658 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-24 18:33:51] 2024-06-24 16:33:30,699 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | job 6240646774 has completed (purged errors)
[2024-06-24 18:33:51] 2024-06-24 16:33:30,702 | INFO     | overall cleanup function is called
[2024-06-24 18:33:51] 2024-06-24 16:33:31,710 | INFO     | --- collectZombieJob: --- 10, [3162038]
[2024-06-24 18:33:51] 2024-06-24 16:33:31,711 | INFO     | zombie collector waiting for pid 3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:31,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 18:33:51] 2024-06-24 16:33:32,715 | INFO     | collected zombie processes
[2024-06-24 18:33:51] 2024-06-24 16:33:32,716 | INFO     | will now attempt to kill all subprocesses of pid=3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:32,860 | INFO     | process IDs to be killed: [3162038] (in reverse order)
[2024-06-24 18:33:51] 2024-06-24 16:33:32,987 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 18:33:51] 2024-06-24 16:33:32,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 18:33:51] 2024-06-24 16:33:32,994 | INFO     | did not find any defunct processes belonging to 3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:33,003 | INFO     | did not find any defunct processes belonging to 3162038
[2024-06-24 18:33:51] 2024-06-24 16:33:33,004 | INFO     | ready for new job
[2024-06-24 18:33:51] 2024-06-24 16:33:33,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 18:33:51] 2024-06-24 16:33:33,008 | INFO     | *************************************
[2024-06-24 18:33:51] 2024-06-24 16:33:33,008 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 18:33:51] 2024-06-24 16:33:33,008 | INFO     | *************************************
[2024-06-24 18:33:51] 2024-06-24 16:33:33,008 | INFO     | 
[2024-06-24 18:33:51] 2024-06-24 16:33:33,011 | INFO     | architecture information:
[2024-06-24 18:33:51] 2024-06-24 16:33:33,011 | INFO     | executing command: cat /etc/os-release
[2024-06-24 18:33:51] 2024-06-24 16:33:33,025 | INFO     | cat /etc/os-release:
[2024-06-24 18:33:51] NAME="CentOS Linux"
[2024-06-24 18:33:51] VERSION="7 (Core)"
[2024-06-24 18:33:51] ID="centos"
[2024-06-24 18:33:51] ID_LIKE="rhel fedora"
[2024-06-24 18:33:51] VERSION_ID="7"
[2024-06-24 18:33:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 18:33:51] ANSI_COLOR="0;31"
[2024-06-24 18:33:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 18:33:51] HOME_URL="https://www.centos.org/"
[2024-06-24 18:33:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 18:33:51] 
[2024-06-24 18:33:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 18:33:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 18:33:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 18:33:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 18:33:51] 
[2024-06-24 18:33:51] 2024-06-24 16:33:33,026 | INFO     | *************************************
[2024-06-24 18:33:51] 2024-06-24 16:33:33,528 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-24 18:33:51] 2024-06-24 16:33:33,552 | INFO     | sufficient remaining disk space (1677271760896 B)
[2024-06-24 18:33:51] 2024-06-24 16:33:33,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 18:33:51] 2024-06-24 16:33:33,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 18:33:51] 2024-06-24 16:33:33,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 18:33:51] 2024-06-24 16:33:33,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 18:33:51] 2024-06-24 16:33:33,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 18:33:51] 2024-06-24 16:33:33,554 | INFO     | aborting loop
[2024-06-24 18:33:51] 2024-06-24 16:33:33,668 | INFO     | all data control threads have been joined
[2024-06-24 18:33:51] 2024-06-24 16:33:33,780 | INFO     | all payload control threads have been joined
[2024-06-24 18:33:51] 2024-06-24 16:33:34,201 | INFO     | all job control threads have been joined
[2024-06-24 18:33:51] 2024-06-24 16:33:34,470 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 18:33:51] 2024-06-24 16:33:34,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 18:33:51] 2024-06-24 16:33:34,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 18:33:51] 2024-06-24 16:33:34,558 | INFO     | [job] retrieve thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:34,558 | INFO     | [job] job monitor thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:34,638 | INFO     | [payload] validate_post thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:34,673 | INFO     | [data] control thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:34,785 | INFO     | [payload] control thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,020 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,150 | INFO     | [payload] failed_post thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,170 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,206 | INFO     | [job] control thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,426 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,517 | INFO     | [job] validate thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,518 | INFO     | [data] copytool_in thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,558 | INFO     | [data] copytool_out thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:35,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 18:33:51] 2024-06-24 16:33:36,670 | INFO     | [job] queue monitor thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:37,559 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:44,385 | INFO     | job.realtimelogging is not enabled
[2024-06-24 18:33:51] 2024-06-24 16:33:45,390 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 18:33:51] 2024-06-24 16:33:45,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47229562061888)>', '<ExcThread(monitor, started 47230081832704)>']
[2024-06-24 18:33:51] 2024-06-24 16:33:45,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 18:33:51] 2024-06-24 16:33:45,526 | INFO     | [monitor] control thread has ended
[2024-06-24 18:33:51] 2024-06-24 16:33:50,433 | INFO     | all workflow threads have been joined
[2024-06-24 18:33:51] 2024-06-24 16:33:50,434 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 18:33:51] 2024-06-24 16:33:50,434 | INFO     | traces error code: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:50,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 18:33:51] 2024-06-24 16:33:50,536 [wrapper] ==== pilot stdout END ====
[2024-06-24 18:33:51] 2024-06-24 16:33:50,539 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 18:33:51] 2024-06-24 16:33:50,541 [wrapper] pilotpid: 3155178
[2024-06-24 18:33:51] 2024-06-24 16:33:50,543 [wrapper] Pilot exit status: 0
[2024-06-24 18:33:51] 2024-06-24 16:33:50,552 [wrapper] pandaids: 6240646774
[2024-06-24 18:33:51] 2024-06-24 16:33:50,610 [wrapper] cleanup supervisor_pilot  168169 3155179
[2024-06-24 18:33:51] 2024-06-24 16:33:50,613 [wrapper] Test setup, not cleaning
[2024-06-24 18:33:51] 2024-06-24 16:33:50,615 [wrapper] ==== wrapper stdout END ====
[2024-06-24 18:33:51] 2024-06-24 16:33:50,617 [wrapper] ==== wrapper stderr END ====
[2024-06-24 18:33:51] 2024-06-24 16:33:50,622 [wrapper] apfmon messages muted
[2024-06-24 18:33:51]  *** Error codes and diagnostics ***
[2024-06-24 18:33:51]     "exeErrorCode": 0,
[2024-06-24 18:33:51]     "exeErrorDiag": "",
[2024-06-24 18:33:51]     "pilotErrorCode": 0,
[2024-06-24 18:33:51]     "pilotErrorDiag": "",
[2024-06-24 18:33:51]  *** Listing of results directory ***
[2024-06-24 18:33:51] total 882464
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc    469766 Jun 22 02:37 pilot3.tar.gz
[2024-06-24 18:33:51] -rwx------ 1 boinc boinc     32308 Jun 22 02:58 runpilot2-wrapper.sh
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc      5654 Jun 22 02:58 queuedata.json
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc       100 Jun 24 03:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 18:33:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 24 03:43 run_atlas
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc       105 Jun 24 03:43 job.xml
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc      6455 Jun 24 03:43 init_data.xml
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc 540939092 Jun 24 03:43 EVNT.38776210._001027.pool.root.1
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc     17537 Jun 24 03:43 start_atlas.sh
[2024-06-24 18:33:51] drwxrwx--x 2 boinc boinc      4096 Jun 24 03:43 shared
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc    482530 Jun 24 03:43 input.tar.gz
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc         0 Jun 24 03:43 boinc_lockfile
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc      2647 Jun 24 03:43 pandaJob.out
[2024-06-24 18:33:51] -rw------- 1 boinc boinc       424 Jun 24 03:43 setup.sh.local
[2024-06-24 18:33:51] -rw------- 1 boinc boinc   1024662 Jun 24 03:43 agis_schedconf.cvmfs.json
[2024-06-24 18:33:51] -rw------- 1 boinc boinc   1321363 Jun 24 03:43 cric_ddmendpoints.json
[2024-06-24 18:33:51] drwx------ 4 boinc boinc      4096 Jun 24 03:43 pilot3
[2024-06-24 18:33:51] -rw------- 1 boinc boinc 343594458 Jun 24 18:32 HITS.38921013._052744.pool.root.1
[2024-06-24 18:33:51] -rw------- 1 boinc boinc        95 Jun 24 18:32 pilot_heartbeat.json
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc       533 Jun 24 18:32 boinc_task_state.xml
[2024-06-24 18:33:51] -rw------- 1 boinc boinc      1041 Jun 24 18:33 memory_monitor_summary.json
[2024-06-24 18:33:51] -rw------- 1 boinc boinc         0 Jun 24 18:33 agis_ddmendpoints.agis.ALL.json
[2024-06-24 18:33:51] -rw------- 1 boinc boinc    806069 Jun 24 18:33 log.38921013._052744.job.log.tgz.1
[2024-06-24 18:33:51] -rw------- 1 boinc boinc      7764 Jun 24 18:33 heartbeat.json
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc        29 Jun 24 18:33 wrapper_checkpoint.txt
[2024-06-24 18:33:51] -rw------- 1 boinc boinc      4294 Jun 24 18:33 pilotlog.txt
[2024-06-24 18:33:51] -rw------- 1 boinc boinc   6981979 Jun 24 18:33 log.38921013._052744.job.log.1
[2024-06-24 18:33:51] -rw------- 1 boinc boinc       357 Jun 24 18:33 output.list
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc       620 Jun 24 18:33 runtime_log
[2024-06-24 18:33:51] -rw------- 1 boinc boinc   7802880 Jun 24 18:33 result.tar.gz
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc     11410 Jun 24 18:33 runtime_log.err
[2024-06-24 18:33:51] -rw------- 1 boinc boinc       661 Jun 24 18:33 ST7KDmeG4e5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmOSYKDm3iES3n.diag
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc      8192 Jun 24 18:33 boinc_mmap_file
[2024-06-24 18:33:51] -rw-r--r-- 1 boinc boinc     21298 Jun 24 18:33 stderr.txt
[2024-06-24 18:33:51] HITS file was successfully produced:
[2024-06-24 18:33:51] -rw------- 1 boinc boinc 343594458 Jun 24 18:32 shared/HITS.pool.root.1
[2024-06-24 18:33:51]  *** Contents of shared directory: ***
[2024-06-24 18:33:51] total 871928
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc 540939092 Jun 24 03:43 ATLAS.root_0
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc     17537 Jun 24 03:43 start_atlas.sh
[2024-06-24 18:33:51] -rw-r--r-- 2 boinc boinc    482530 Jun 24 03:43 input.tar.gz
[2024-06-24 18:33:51] -rw------- 1 boinc boinc 343594458 Jun 24 18:32 HITS.pool.root.1
[2024-06-24 18:33:51] -rw------- 1 boinc boinc   7802880 Jun 24 18:33 result.tar.gz
18:33:52 (3150956): run_atlas exited; CPU time 207773.175240
18:33:52 (3150956): called boinc_finish(0)

</stderr_txt>
]]>

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