Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:24:39 (3009636): wrapper (7.7.26015): starting
21:24:39 (3009636): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 21:24:39] Arguments: --nthreads 4
[2024-06-23 21:24:39] Threads: 4
[2024-06-23 21:24:39] Checking for CVMFS
[2024-06-23 21:24:39] No cvmfs_config command found, will try listing directly
[2024-06-23 21:24:39] CVMFS is ok
[2024-06-23 21:24:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 21:24:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 21:24:39] Further information can be found at the LHC@home message board.
[2024-06-23 21:24:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 21:24:39] Checking for apptainer binary...
[2024-06-23 21:24:39] which: no apptainer in ((null))
[2024-06-23 21:24:39] apptainer is not installed, using version from CVMFS
[2024-06-23 21:24:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 21:24:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-23 21:24:40] apptainer works
[2024-06-23 21:24:40] Set ATHENA_PROC_NUMBER=4
[2024-06-23 21:24:40] Set ATHENA_CORE_NUMBER=4
[2024-06-23 21:24:40] Starting ATLAS job with PandaID=6240458582
[2024-06-23 21:24:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 02:16:39]  *** The last 200 lines of the pilot log: ***
[2024-06-24 02:16:39] 2024-06-24 00:16:23,060 | WARNING  | GPU info not found in prmon json
[2024-06-24 02:16:39] 2024-06-24 00:16:23,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 02:16:39] 2024-06-24 00:16:23,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 02:16:39] 2024-06-24 00:16:23,066 | INFO     | fitting pss+swap vs Time
[2024-06-24 02:16:39] 2024-06-24 00:16:23,067 | INFO     | model: linear, x: [1719170712.0, 1719170773.0, 1719170834.0, 1719170895.0, 1719170956.0, 1719171017.0, 1719171078.0, 1719171139.0, 1719171200.0, 1719171261.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,067 | INFO     | sum of square deviations: 7330250928.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,070 | INFO     | sum of deviations: 86072816884.99997
[2024-06-24 02:16:39] 2024-06-24 00:16:23,070 | INFO     | mean x: 1719179435.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,070 | INFO     | mean y: 2332192.7526132404
[2024-06-24 02:16:39] 2024-06-24 00:16:23,070 | INFO     | -- intersect: -20184509725.029648
[2024-06-24 02:16:39] 2024-06-24 00:16:23,070 | INFO     | intersect: -20184509725.029648
[2024-06-24 02:16:39] 2024-06-24 00:16:23,071 | INFO     | chi2: 4.347671295826171
[2024-06-24 02:16:39] 2024-06-24 00:16:23,071 | INFO     | model: linear, x: [1719170712.0, 1719170773.0, 1719170834.0, 1719170895.0, 1719170956.0, 1719171017.0, 1719171078.0, 1719171139.0, 1719171200.0, 1719171261.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,072 | INFO     | sum of square deviations: 6953769450.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,074 | INFO     | sum of deviations: 102266690198.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,074 | INFO     | mean x: 1719179282.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,074 | INFO     | mean y: 2338649.9929078016
[2024-06-24 02:16:39] 2024-06-24 00:16:23,075 | INFO     | -- intersect: -25281038420.497364
[2024-06-24 02:16:39] 2024-06-24 00:16:23,075 | INFO     | intersect: -25281038420.497364
[2024-06-24 02:16:39] 2024-06-24 00:16:23,075 | INFO     | chi2: 3.606386455857449
[2024-06-24 02:16:39] 2024-06-24 00:16:23,075 | INFO     | current chi2=3.606386455857449 (change=17.05015833833542 %)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,076 | INFO     | right removable region: 281
[2024-06-24 02:16:39] 2024-06-24 00:16:23,076 | INFO     | model: linear, x: [1719171017.0, 1719171078.0, 1719171139.0, 1719171200.0, 1719171261.0, 1719171322.0, 1719171383.0, 1719171444.0, 1719171505.0, 1719171566.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,076 | INFO     | sum of square deviations: 6953769450.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,079 | INFO     | sum of deviations: 22351040011.999996
[2024-06-24 02:16:39] 2024-06-24 00:16:23,079 | INFO     | mean x: 1719179587.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,079 | INFO     | mean y: 2357938.709219858
[2024-06-24 02:16:39] 2024-06-24 00:16:23,079 | INFO     | -- intersect: -5523487003.599477
[2024-06-24 02:16:39] 2024-06-24 00:16:23,079 | INFO     | intersect: -5523487003.599477
[2024-06-24 02:16:39] 2024-06-24 00:16:23,080 | INFO     | chi2: 2.1040274253801257
[2024-06-24 02:16:39] 2024-06-24 00:16:23,080 | INFO     | current chi2=2.1040274253801257 (change=51.60564628241276 %)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,080 | INFO     | model: linear, x: [1719171322.0, 1719171383.0, 1719171444.0, 1719171505.0, 1719171566.0, 1719171627.0, 1719171688.0, 1719171749.0, 1719171810.0, 1719171871.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,081 | INFO     | sum of square deviations: 6590404498.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,083 | INFO     | sum of deviations: -26539646858.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,083 | INFO     | mean x: 1719179740.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,083 | INFO     | mean y: 2378461.9963898915
[2024-06-24 02:16:39] 2024-06-24 00:16:23,084 | INFO     | -- intersect: 6925538216.28379
[2024-06-24 02:16:39] 2024-06-24 00:16:23,084 | INFO     | intersect: 6925538216.28379
[2024-06-24 02:16:39] 2024-06-24 00:16:23,084 | INFO     | chi2: 0.9048007705959297
[2024-06-24 02:16:39] 2024-06-24 00:16:23,084 | INFO     | current chi2=0.9048007705959297 (change=56.99672163577131 %)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,085 | INFO     | model: linear, x: [1719171627.0, 1719171688.0, 1719171749.0, 1719171810.0, 1719171871.0, 1719171932.0, 1719171993.0, 1719172054.0, 1719172115.0, 1719172176.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,085 | INFO     | sum of square deviations: 6239923508.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,087 | INFO     | sum of deviations: -35298712894.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,087 | INFO     | mean x: 1719179892.5
[2024-06-24 02:16:39] 2024-06-24 00:16:23,088 | INFO     | mean y: 2382237.606617647
[2024-06-24 02:16:39] 2024-06-24 00:16:23,088 | INFO     | -- intersect: 9727635658.029615
[2024-06-24 02:16:39] 2024-06-24 00:16:23,088 | INFO     | intersect: 9727635658.029615
[2024-06-24 02:16:39] 2024-06-24 00:16:23,088 | INFO     | chi2: 0.8224723328703497
[2024-06-24 02:16:39] 2024-06-24 00:16:23,089 | INFO     | current chi2=0.8224723328703497 (change=9.099068038078252 %)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,089 | INFO     | left removable region: 30
[2024-06-24 02:16:39] 2024-06-24 00:16:23,089 | INFO     | model: linear, x: [1719172542.0, 1719172603.0, 1719172664.0, 1719172725.0, 1719172786.0, 1719172847.0, 1719172908.0, 1719172969.0, 1719173030.0, 1719173091.0, 1719
[2024-06-24 02:16:39] 2024-06-24 00:16:23,089 | INFO     | sum of square deviations: 4903347750.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,091 | INFO     | sum of deviations: -10214181417.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,091 | INFO     | mean x: 1719180167.0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,092 | INFO     | mean y: 2386252.693227092
[2024-06-24 02:16:39] 2024-06-24 00:16:23,092 | INFO     | -- intersect: 3583616671.083674
[2024-06-24 02:16:39] 2024-06-24 00:16:23,092 | INFO     | intersect: 3583616671.083674
[2024-06-24 02:16:39] 2024-06-24 00:16:23,092 | INFO     | chi2: 0.046402716707956815
[2024-06-24 02:16:39] 2024-06-24 00:16:23,093 | INFO     | -- intersect: 3583616671.083674
[2024-06-24 02:16:39] 2024-06-24 00:16:23,093 | INFO     | current memory leak: -2.08 B/s (using 251 data points, chi2=0.05)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,093 | INFO     | ..............................
[2024-06-24 02:16:39] 2024-06-24 00:16:23,093 | INFO     | . Timing measurements:
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . get job = 0 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . initial setup = 1 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . payload setup = 4 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . stage-in = 0 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . payload execution = 17462 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . stage-out = 0 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | . log creation = 0 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,094 | INFO     | ..............................
[2024-06-24 02:16:39] 2024-06-24 00:16:23,628 | INFO     | 
[2024-06-24 02:16:39] 2024-06-24 00:16:23,628 | INFO     | job summary report
[2024-06-24 02:16:39] 2024-06-24 00:16:23,628 | INFO     | --------------------------------------------------
[2024-06-24 02:16:39] 2024-06-24 00:16:23,628 | INFO     | PanDA job id: 6240458582
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | task id: 40024014
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | errors: (none)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | pilot state: finished 
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | transexitcode: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | exeerrorcode: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | exeerrordiag: 
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | exitcode: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | exitmsg: OK
[2024-06-24 02:16:39] 2024-06-24 00:16:23,629 | INFO     | cpuconsumptiontime: 66599 s
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | nevents: 400
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | neventsw: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | pid: 3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | pgrp: 3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | corecount: 4
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | event service: False
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | sizes: {0: 2386908, 4: 2387114, 11: 2387142, 17471: 2419254, 17472: 2428236, 17475: 2428292, 17480: 2428590}
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | --------------------------------------------------
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | 
[2024-06-24 02:16:39] 2024-06-24 00:16:23,630 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-24 02:16:39] 2024-06-24 00:16:23,644 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,644 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,646 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,646 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 02:16:39] 2024-06-24 00:16:23,646 | INFO     | job 6240458582 has completed (purged errors)
[2024-06-24 02:16:39] 2024-06-24 00:16:23,646 | INFO     | overall cleanup function is called
[2024-06-24 02:16:39] 2024-06-24 00:16:24,652 | INFO     | --- collectZombieJob: --- 10, [3021301]
[2024-06-24 02:16:39] 2024-06-24 00:16:24,653 | INFO     | zombie collector waiting for pid 3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:24,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 02:16:39] 2024-06-24 00:16:25,657 | INFO     | collected zombie processes
[2024-06-24 02:16:39] 2024-06-24 00:16:25,658 | INFO     | will now attempt to kill all subprocesses of pid=3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:25,737 | INFO     | process IDs to be killed: [3021301] (in reverse order)
[2024-06-24 02:16:39] 2024-06-24 00:16:25,805 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 02:16:39] 2024-06-24 00:16:25,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 02:16:39] 2024-06-24 00:16:25,810 | INFO     | did not find any defunct processes belonging to 3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:25,813 | INFO     | did not find any defunct processes belonging to 3021301
[2024-06-24 02:16:39] 2024-06-24 00:16:25,814 | INFO     | ready for new job
[2024-06-24 02:16:39] 2024-06-24 00:16:25,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 02:16:39] 2024-06-24 00:16:25,816 | INFO     | *************************************
[2024-06-24 02:16:39] 2024-06-24 00:16:25,816 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 02:16:39] 2024-06-24 00:16:25,816 | INFO     | *************************************
[2024-06-24 02:16:39] 2024-06-24 00:16:25,816 | INFO     | 
[2024-06-24 02:16:39] 2024-06-24 00:16:25,818 | INFO     | architecture information:
[2024-06-24 02:16:39] 2024-06-24 00:16:25,818 | INFO     | executing command: cat /etc/os-release
[2024-06-24 02:16:39] 2024-06-24 00:16:25,829 | INFO     | cat /etc/os-release:
[2024-06-24 02:16:39] NAME="CentOS Linux"
[2024-06-24 02:16:39] VERSION="7 (Core)"
[2024-06-24 02:16:39] ID="centos"
[2024-06-24 02:16:39] ID_LIKE="rhel fedora"
[2024-06-24 02:16:39] VERSION_ID="7"
[2024-06-24 02:16:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 02:16:39] ANSI_COLOR="0;31"
[2024-06-24 02:16:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 02:16:39] HOME_URL="https://www.centos.org/"
[2024-06-24 02:16:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 02:16:39] 
[2024-06-24 02:16:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 02:16:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 02:16:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 02:16:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 02:16:39] 
[2024-06-24 02:16:39] 2024-06-24 00:16:25,829 | INFO     | *************************************
[2024-06-24 02:16:39] 2024-06-24 00:16:26,331 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-24 02:16:39] 2024-06-24 00:16:26,345 | INFO     | sufficient remaining disk space (1677086162944 B)
[2024-06-24 02:16:39] 2024-06-24 00:16:26,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 02:16:39] 2024-06-24 00:16:26,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 02:16:39] 2024-06-24 00:16:26,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 02:16:39] 2024-06-24 00:16:26,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 02:16:39] 2024-06-24 00:16:26,445 | INFO     | aborting loop
[2024-06-24 02:16:39] 2024-06-24 00:16:26,549 | INFO     | all job control threads have been joined
[2024-06-24 02:16:39] 2024-06-24 00:16:26,734 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 02:16:39] 2024-06-24 00:16:26,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 02:16:39] 2024-06-24 00:16:26,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 02:16:39] 2024-06-24 00:16:27,068 | INFO     | all data control threads have been joined
[2024-06-24 02:16:39] 2024-06-24 00:16:27,351 | INFO     | [job] retrieve thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,401 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,450 | INFO     | [job] job monitor thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,552 | INFO     | all payload control threads have been joined
[2024-06-24 02:16:39] 2024-06-24 00:16:27,554 | INFO     | [job] control thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,660 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,801 | INFO     | [job] validate thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,836 | INFO     | [payload] validate_post thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,866 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:27,935 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:28,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 02:16:39] 2024-06-24 00:16:28,048 | INFO     | [payload] failed_post thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:28,073 | INFO     | [data] control thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:28,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 02:16:39] 2024-06-24 00:16:28,351 | INFO     | [data] copytool_out thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:28,557 | INFO     | [payload] control thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:28,659 | INFO     | [data] copytool_in thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:29,162 | INFO     | [job] queue monitor thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:32,051 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 02:16:39] 2024-06-24 00:16:34,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47972453299264)>', '<ExcThread(monitor, started 47973041964800)>']
[2024-06-24 02:16:39] 2024-06-24 00:16:34,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 02:16:39] 2024-06-24 00:16:34,774 | INFO     | [monitor] control thread has ended
[2024-06-24 02:16:39] 2024-06-24 00:16:39,099 | INFO     | all workflow threads have been joined
[2024-06-24 02:16:39] 2024-06-24 00:16:39,099 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 02:16:39] 2024-06-24 00:16:39,100 | INFO     | traces error code: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:39,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 02:16:39] 2024-06-24 00:16:39,173 [wrapper] ==== pilot stdout END ====
[2024-06-24 02:16:39] 2024-06-24 00:16:39,175 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 02:16:39] 2024-06-24 00:16:39,176 [wrapper] pilotpid: 3013843
[2024-06-24 02:16:39] 2024-06-24 00:16:39,178 [wrapper] Pilot exit status: 0
[2024-06-24 02:16:39] 2024-06-24 00:16:39,185 [wrapper] pandaids: 6240458582
[2024-06-24 02:16:39] 2024-06-24 00:16:39,224 [wrapper] cleanup supervisor_pilot 3387921 3013844
[2024-06-24 02:16:39] 2024-06-24 00:16:39,226 [wrapper] Test setup, not cleaning
[2024-06-24 02:16:39] 2024-06-24 00:16:39,227 [wrapper] ==== wrapper stdout END ====
[2024-06-24 02:16:39] 2024-06-24 00:16:39,229 [wrapper] ==== wrapper stderr END ====
[2024-06-24 02:16:39] 2024-06-24 00:16:39,234 [wrapper] apfmon messages muted
[2024-06-24 02:16:39]  *** Error codes and diagnostics ***
[2024-06-24 02:16:39]     "exeErrorCode": 0,
[2024-06-24 02:16:39]     "exeErrorDiag": "",
[2024-06-24 02:16:39]     "pilotErrorCode": 0,
[2024-06-24 02:16:39]     "pilotErrorDiag": "",
[2024-06-24 02:16:39]  *** Listing of results directory ***
[2024-06-24 02:16:39] total 845392
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc    469766 Jun 22 00:41 pilot3.tar.gz
[2024-06-24 02:16:39] -rwx------ 1 boinc boinc     32308 Jun 22 00:42 runpilot2-wrapper.sh
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc      5654 Jun 22 00:42 queuedata.json
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc       100 Jun 23 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 02:16:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 21:24 run_atlas
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc       105 Jun 23 21:24 job.xml
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc      6455 Jun 23 21:24 init_data.xml
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc 601592956 Jun 23 21:24 EVNT.40024012._000046.pool.root.1
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc     17537 Jun 23 21:24 start_atlas.sh
[2024-06-24 02:16:39] drwxrwx--x 2 boinc boinc      4096 Jun 23 21:24 shared
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc    482482 Jun 23 21:24 input.tar.gz
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc         0 Jun 23 21:24 boinc_lockfile
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc      2512 Jun 23 21:24 pandaJob.out
[2024-06-24 02:16:39] -rw------- 1 boinc boinc       424 Jun 23 21:24 setup.sh.local
[2024-06-24 02:16:39] -rw------- 1 boinc boinc   1026186 Jun 23 21:24 agis_schedconf.cvmfs.json
[2024-06-24 02:16:39] -rw------- 1 boinc boinc   1321363 Jun 23 21:24 cric_ddmendpoints.json
[2024-06-24 02:16:39] drwx------ 4 boinc boinc      4096 Jun 23 21:24 pilot3
[2024-06-24 02:16:39] -rw------- 1 boinc boinc        95 Jun 24 02:15 pilot_heartbeat.json
[2024-06-24 02:16:39] -rw------- 1 boinc boinc 256128739 Jun 24 02:15 HITS.40024014._001513.pool.root.1
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc       532 Jun 24 02:15 boinc_task_state.xml
[2024-06-24 02:16:39] -rw------- 1 boinc boinc      1040 Jun 24 02:16 memory_monitor_summary.json
[2024-06-24 02:16:39] -rw------- 1 boinc boinc         0 Jun 24 02:16 agis_ddmendpoints.agis.ALL.json
[2024-06-24 02:16:39] -rw------- 1 boinc boinc    382044 Jun 24 02:16 log.40024014._001513.job.log.tgz.1
[2024-06-24 02:16:39] -rw------- 1 boinc boinc      7756 Jun 24 02:16 heartbeat.json
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc      8192 Jun 24 02:16 boinc_mmap_file
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc        28 Jun 24 02:16 wrapper_checkpoint.txt
[2024-06-24 02:16:39] -rw------- 1 boinc boinc      4222 Jun 24 02:16 pilotlog.txt
[2024-06-24 02:16:39] -rw------- 1 boinc boinc   1826765 Jun 24 02:16 log.40024014._001513.job.log.1
[2024-06-24 02:16:39] -rw------- 1 boinc boinc       357 Jun 24 02:16 output.list
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc       620 Jun 24 02:16 runtime_log
[2024-06-24 02:16:39] -rw------- 1 boinc boinc   2232320 Jun 24 02:16 result.tar.gz
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc     11410 Jun 24 02:16 runtime_log.err
[2024-06-24 02:16:39] -rw------- 1 boinc boinc       659 Jun 24 02:16 fjPLDmH91e5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmZPYKDmHiEVem.diag
[2024-06-24 02:16:39] -rw-r--r-- 1 boinc boinc     21257 Jun 24 02:16 stderr.txt
[2024-06-24 02:16:39] HITS file was successfully produced:
[2024-06-24 02:16:39] -rw------- 1 boinc boinc 256128739 Jun 24 02:15 shared/HITS.pool.root.1
[2024-06-24 02:16:39]  *** Contents of shared directory: ***
[2024-06-24 02:16:39] total 840304
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc 601592956 Jun 23 21:24 ATLAS.root_0
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc     17537 Jun 23 21:24 start_atlas.sh
[2024-06-24 02:16:39] -rw-r--r-- 2 boinc boinc    482482 Jun 23 21:24 input.tar.gz
[2024-06-24 02:16:39] -rw------- 1 boinc boinc 256128739 Jun 24 02:15 HITS.pool.root.1
[2024-06-24 02:16:39] -rw------- 1 boinc boinc   2232320 Jun 24 02:16 result.tar.gz
02:16:41 (3009636): run_atlas exited; CPU time 66424.031551
02:16:41 (3009636): called boinc_finish(0)

</stderr_txt>
]]>

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