Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 23:13:35 (93950): Detected: vboxwrapper 26206
2024-06-22 23:13:35 (93950): Detected: BOINC client v7.24.1
2024-06-22 23:13:36 (93950): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-22 23:13:36 (93950): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 23:13:36 (93950): Create VM. (boinc_50181ba3e0f5766d, slot#0)
2024-06-22 23:13:36 (93950): Setting Memory Size for VM. (4800MB)
2024-06-22 23:13:36 (93950): Setting CPU Count for VM. (8)
2024-06-22 23:13:36 (93950): Setting Chipset Options for VM.
2024-06-22 23:13:36 (93950): Setting Graphics Controller Options for VM.
2024-06-22 23:13:36 (93950): Setting Boot Options for VM.
2024-06-22 23:13:36 (93950): Setting Network Configuration for NAT.
2024-06-22 23:13:36 (93950): Enabling VM Network Access.
2024-06-22 23:13:36 (93950): Disabling USB Support for VM.
2024-06-22 23:13:36 (93950): Disabling COM Port Support for VM.
2024-06-22 23:13:36 (93950): Disabling LPT Port Support for VM.
2024-06-22 23:13:36 (93950): Disabling Audio Support for VM.
2024-06-22 23:13:36 (93950): Disabling Clipboard Support for VM.
2024-06-22 23:13:36 (93950): Disabling Drag and Drop Support for VM.
2024-06-22 23:13:36 (93950): Adding storage controller(s) to VM.
2024-06-22 23:13:36 (93950): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 23:13:38 (93950): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 23:13:38 (93950): forwarding host port 43935 to guest port 80
2024-06-22 23:13:38 (93950): Enabling remote desktop for VM.
2024-06-22 23:13:38 (93950): Required extension pack not installed, remote desktop not enabled.
2024-06-22 23:13:38 (93950): Enabling shared directory for VM.
2024-06-22 23:13:38 (93950): Starting VM using VBoxManage interface. (boinc_50181ba3e0f5766d, slot#0)
2024-06-22 23:13:39 (93950): Successfully started VM. (PID = '94210')
2024-06-22 23:13:39 (93950): Reporting VM Process ID to BOINC.
2024-06-22 23:13:39 (93950): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-22 23:13:39 (93950): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 23:13:39 (93950): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 23:13:39 (93950): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 23:13:39 (93950): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 23:13:39 (93950): Detected: Web Application Enabled (http://localhost:43935)
2024-06-22 23:13:40 (93950): VM state change detected. (old = 'running', new = 'paused')
2024-06-22 23:13:59 (93950): Preference change detected
2024-06-22 23:13:59 (93950): Setting CPU throttle for VM. (50%)
2024-06-22 23:13:59 (93950): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 23:14:00 (93950): VM state change detected. (old = 'paused', new = 'running')
2024-06-22 23:14:01 (93950): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 23:14:01 (93950): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 23:14:04 (93950): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 23:14:04 (93950): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 23:14:04 (93950): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 23:14:12 (93950): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 23:14:12 (93950): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 23:14:18 (93950): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000163 main     Log opened 2024-06-22T21:13:56.411198000Z
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000242 main     OS Product: Linux
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000254 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000263 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000273 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000273 main     Process ID: 1358
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000279 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 23:14:18 (93950): Guest Log: 00:00:00.000755 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 23:14:18 (93950): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 23:14:18 (93950): Guest Log: [INFO] Mounting shared directory
2024-06-22 23:14:18 (93950): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 23:14:20 (93950): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 23:14:20 (93950): Guest Log: [INFO] Detected branch: prod
2024-06-22 23:14:20 (93950): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 23:14:20 (93950): Guest Log: Copying input files
2024-06-22 23:14:22 (93950): Guest Log: Copied input files into RunAtlas.
2024-06-22 23:14:23 (93950): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-22 23:14:23 (93950): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-22 23:14:23 (93950): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-22 23:14:23 (93950): Guest Log: Further information can be found at the LHC@home message board.
2024-06-22 23:14:29 (93950): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 23:14:29 (93950): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 23:14:29 (93950): Guest Log: 2.6.3.0 1636 0 32284 134179 4 1 3117206 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-22 23:14:30 (93950): Guest Log: copied the webapp to /var/www
2024-06-22 23:14:30 (93950): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-22 23:14:30 (93950): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-22 23:14:30 (93950): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 23:14:30 (93950): Guest Log:  *** Starting ATLAS job. (PandaID=6240429539 taskID=38921013) ***
2024-06-23 00:52:59 (93950): Status Report: Elapsed Time: '6000.000000'
2024-06-23 00:52:59 (93950): Status Report: CPU Time: '18229.310000'
2024-06-23 02:32:00 (93950): Status Report: Elapsed Time: '12000.000000'
2024-06-23 02:32:00 (93950): Status Report: CPU Time: '41021.510000'
2024-06-23 04:11:00 (93950): Status Report: Elapsed Time: '18000.000000'
2024-06-23 04:11:00 (93950): Status Report: CPU Time: '63805.750000'
2024-06-23 05:42:55 (93950): Guest Log:  *** Job finished ***
2024-06-23 05:42:55 (93950): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:31,030 | INFO     | [data] queue_monitor thread has finished
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:36,277 | INFO     | job.realtimelogging is not enabled
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:37,299 | INFO     | [payload] run_realtimelog thread has finished
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:38,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698028115776)>', '<ExcThread(monitor, started 140697013315328)>']
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:38,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:38,775 | INFO     | [monitor] control thread has ended
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,701 | INFO     | all workflow threads have been joined
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,701 | INFO     | end of generic workflow (traces error code: 0)
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,701 | INFO     | traces error code: 0
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,833 [wrapper] ==== pilot stdout END ====
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,837 [wrapper] ==== wrapper stdout RESUME ====
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,841 [wrapper] pilotpid: 6564
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,844 [wrapper] Pilot exit status: 0
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,859 [wrapper] pandaids: 6240429539
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,880 [wrapper] cleanup supervisor_pilot 23837 6565
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,884 [wrapper] Test setup, not cleaning
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,888 [wrapper] ==== wrapper stdout END ====
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,891 [wrapper] ==== wrapper stderr END ====
2024-06-23 05:42:55 (93950): Guest Log: 2024-06-23 03:42:43,898 [wrapper] apfmon messages muted
2024-06-23 05:42:55 (93950): Guest Log:  *** Error codes and diagnostics ***
2024-06-23 05:42:55 (93950): Guest Log:     "exeErrorCode": 0,
2024-06-23 05:42:55 (93950): Guest Log:     "exeErrorDiag": "",
2024-06-23 05:42:55 (93950): Guest Log:     "pilotErrorCode": 0,
2024-06-23 05:42:55 (93950): Guest Log:     "pilotErrorDiag": "",
2024-06-23 05:42:55 (93950): Guest Log:  *** Listing of results directory ***
2024-06-23 05:42:55 (93950): Guest Log: total 344372
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 22:17 pilot3.tar.gz
2024-06-23 05:42:55 (93950): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 22:19 runpilot2-wrapper.sh
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 22:19 queuedata.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 22 21:14 start_atlas.sh
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas    482522 Jun 22 21:14 input.tar.gz
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas      6828 Jun 22 21:14 init_data.xml
2024-06-23 05:42:55 (93950): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 21:14 EVNT.38776210._000655.pool.root.1 -> /data/./ATLAS.root_0
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas      2647 Jun 22 21:14 pandaJob.out
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas       424 Jun 22 21:14 setup.sh.local
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas   1025691 Jun 22 21:14 agis_schedconf.cvmfs.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 21:14 cric_ddmendpoints.json
2024-06-23 05:42:55 (93950): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 21:14 pilot3
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas 345525108 Jun 23 03:41 HITS.38921013._052474.pool.root.1
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas        95 Jun 23 03:41 pilot_heartbeat.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas      1036 Jun 23 03:42 memory_monitor_summary.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas         0 Jun 23 03:42 agis_ddmendpoints.agis.ALL.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas    427406 Jun 23 03:42 log.38921013._052474.job.log.tgz.1
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas      7756 Jun 23 03:42 heartbeat.json
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas      4529 Jun 23 03:42 pilotlog.txt
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas   1394966 Jun 23 03:42 log.38921013._052474.job.log.1
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas       357 Jun 23 03:42 output.list
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 23 03:42 runtime_log
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas   1843200 Jun 23 03:42 result.tar.gz
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 atlas atlas     11012 Jun 23 03:42 runtime_log.err
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas       674 Jun 23 03:42 oCrLDm8l1e5n7Olcko1bjSoqABFKDmABFKDmOtvXDmfSrKDmI7IFIn.diag
2024-06-23 05:42:55 (93950): Guest Log: Looking for outputfile HITS.38921013._052474.pool.root.1
2024-06-23 05:42:55 (93950): Guest Log: HITS file was successfully produced
2024-06-23 05:42:55 (93950): Guest Log: -rw-------. 1 atlas atlas 345525108 Jun 23 03:41 /home/atlas/RunAtlas/HITS.38921013._052474.pool.root.1
2024-06-23 05:42:55 (93950): Guest Log: Successfully finished the ATLAS job!
2024-06-23 05:42:55 (93950): Guest Log: Copying the results back to the shared directory!
2024-06-23 05:42:55 (93950): Guest Log:  *** Contents of shared directory: ***
2024-06-23 05:42:55 (93950): Guest Log: total 532180
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 root root 542591476 Jun 22 21:13 ATLAS.root_0
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 root root      6828 Jun 22 21:13 init_data.xml
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 root root    482522 Jun 22 21:13 input.tar.gz
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 root root   1843200 Jun 23  2024 result.tar.gz
2024-06-23 05:42:55 (93950): Guest Log: -rw-r--r--. 1 root root     17537 Jun 22 21:13 start_atlas.sh
2024-06-23 05:42:55 (93950): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-23 05:42:55 (93950): VM Completion File Detected.
2024-06-23 05:42:55 (93950): Powering off VM.
2024-06-23 05:42:55 (93950): Successfully stopped VM.
2024-06-23 05:42:55 (93950): Deregistering VM. (boinc_50181ba3e0f5766d, slot#0)
2024-06-23 05:42:55 (93950): Removing network bandwidth throttle group from VM.
2024-06-23 05:42:55 (93950): Removing VM from VirtualBox.
05:43:00 (93950): called boinc_finish(0)

</stderr_txt>
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