Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:35:42 (60689): wrapper (7.7.26015): starting
00:35:42 (60689): wrapper: running run_atlas (--nthreads 8)
[2024-06-22 00:35:42] Arguments: --nthreads 8
[2024-06-22 00:35:42] Threads: 8
[2024-06-22 00:35:42] Checking for CVMFS
[2024-06-22 00:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 00:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 00:35:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 00:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 00:35:45] 2.11.2.0 78210 3062 89940 134154 1 119 2239860 18432000 23734 130560 0 263028 99.420 972369 67605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-22 00:35:45] CVMFS is ok
[2024-06-22 00:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 00:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 00:35:45] Further information can be found at the LHC@home message board.
[2024-06-22 00:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 00:35:45] Checking for apptainer binary...
[2024-06-22 00:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 00:35:45] Running /usr/bin/apptainer --version
[2024-06-22 00:35:46] apptainer version 1.3.1-1.el7
[2024-06-22 00:35:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 00:36:11] c-212-2.aglt2.org
[2024-06-22 00:36:11] apptainer works
[2024-06-22 00:36:11] Set ATHENA_PROC_NUMBER=8
[2024-06-22 00:36:11] Set ATHENA_CORE_NUMBER=8
[2024-06-22 00:36:11] Starting ATLAS job with PandaID=6240404852
[2024-06-22 00:36:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 05:53:07]  *** The last 200 lines of the pilot log: ***
[2024-06-22 05:53:07] 2024-06-22 09:52:44,290 | INFO     | monitor loop #1377: job 0:6240404852 is in state 'finished'
[2024-06-22 05:53:07] 2024-06-22 09:52:44,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 05:53:07] 2024-06-22 09:52:46,799 | INFO     | monitor loop #1378: job 0:6240404852 is in state 'finished'
[2024-06-22 05:53:07] 2024-06-22 09:52:46,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,621 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 05:53:07] 2024-06-22 09:52:47,623 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6240404852/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,624 | INFO     | extracted standard info from prmon json
[2024-06-22 05:53:07] 2024-06-22 09:52:47,624 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 05:53:07] 2024-06-22 09:52:47,624 | WARNING  | GPU info not found in prmon json
[2024-06-22 05:53:07] 2024-06-22 09:52:47,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 05:53:07] 2024-06-22 09:52:47,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 05:53:07] 2024-06-22 09:52:47,630 | INFO     | fitting pss+swap vs Time
[2024-06-22 05:53:07] 2024-06-22 09:52:47,630 | INFO     | model: linear, x: [1719031395.0, 1719031456.0, 1719031517.0, 1719031578.0, 1719031639.0, 1719031700.0, 1719031761.0, 1719031822.0, 1719031883.0, 1719031944.0, 1719
[2024-06-22 05:53:07] 2024-06-22 09:52:47,630 | INFO     | sum of square deviations: 8711496161.157879
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | sum of deviations: 547771104698.7895
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | mean x: 1719040636.5526316
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | mean y: 2299116.013157895
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | -- intersect: -108089442082.82451
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | intersect: -108089442082.82451
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | chi2: 16.186940973933602
[2024-06-22 05:53:07] 2024-06-22 09:52:47,632 | INFO     | model: linear, x: [1719031395.0, 1719031456.0, 1719031517.0, 1719031578.0, 1719031639.0, 1719031700.0, 1719031761.0, 1719031822.0, 1719031883.0, 1719031944.0, 1719
[2024-06-22 05:53:07] 2024-06-22 09:52:47,633 | INFO     | sum of square deviations: 8288683811.143836
[2024-06-22 05:53:07] 2024-06-22 09:52:47,634 | INFO     | sum of deviations: 557944719659.1973
[2024-06-22 05:53:07] 2024-06-22 09:52:47,634 | INFO     | mean x: 1719040484.0535116
[2024-06-22 05:53:07] 2024-06-22 09:52:47,634 | INFO     | mean y: 2302684.050167224
[2024-06-22 05:53:07] 2024-06-22 09:52:47,634 | INFO     | -- intersect: -115713241883.89827
[2024-06-22 05:53:07] 2024-06-22 09:52:47,634 | INFO     | intersect: -115713241883.89827
[2024-06-22 05:53:07] 2024-06-22 09:52:47,635 | INFO     | chi2: 15.269747305316674
[2024-06-22 05:53:07] 2024-06-22 09:52:47,635 | INFO     | current chi2=15.269747305316674 (change=5.666256954256627 %)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,635 | INFO     | right removable region: 298
[2024-06-22 05:53:07] 2024-06-22 09:52:47,635 | INFO     | model: linear, x: [1719031700.0, 1719031761.0, 1719031822.0, 1719031883.0, 1719031944.0, 1719032005.0, 1719032066.0, 1719032127.0, 1719032188.0, 1719032249.0, 1719
[2024-06-22 05:53:07] 2024-06-22 09:52:47,635 | INFO     | sum of square deviations: 8288674051.143836
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | sum of deviations: 454289796710.6319
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | mean x: 1719040789.0535116
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | mean y: 2332806.397993311
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | -- intersect: -94215715312.96725
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | intersect: -94215715312.96725
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | chi2: 12.050416094452826
[2024-06-22 05:53:07] 2024-06-22 09:52:47,637 | INFO     | current chi2=12.050416094452826 (change=25.554704166413945 %)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,638 | INFO     | model: linear, x: [1719032005.0, 1719032066.0, 1719032127.0, 1719032188.0, 1719032249.0, 1719032310.0, 1719032371.0, 1719032432.0, 1719032493.0, 1719032554.0, 1719
[2024-06-22 05:53:07] 2024-06-22 09:52:47,638 | INFO     | sum of square deviations: 7879759178.629271
[2024-06-22 05:53:07] 2024-06-22 09:52:47,639 | INFO     | sum of deviations: 387636628116.092
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | mean x: 1719040941.5544217
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | mean y: 2357635.275510204
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | -- intersect: -84564089012.60106
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | intersect: -84564089012.60106
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | chi2: 10.262849628946507
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | current chi2=10.262849628946507 (change=14.834064247202145 %)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | left removable region: 20
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | model: linear, x: [1719032615.0, 1719032676.0, 1719032737.0, 1719032798.0, 1719032859.0, 1719032920.0, 1719032981.0, 1719033042.0, 1719033103.0, 1719033164.0, 1719
[2024-06-22 05:53:07] 2024-06-22 09:52:47,640 | INFO     | sum of square deviations: 6661991046.579119
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | sum of deviations: 291642497474.9535
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | mean x: 1719041063.557554
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | mean y: 2405382.284172662
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | -- intersect: -75252188256.85953
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | intersect: -75252188256.85953
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | chi2: 7.165418453212581
[2024-06-22 05:53:07] 2024-06-22 09:52:47,642 | INFO     | -- intersect: -75252188256.85953
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | current memory leak: 43.78 B/s (using 278 data points, chi2=7.17)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | ..............................
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . Timing measurements:
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . get job = 0 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . initial setup = 6 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . payload setup = 80 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . stage-in = 0 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . payload execution = 18607 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,643 | INFO     | . stage-out = 5 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,644 | INFO     | . log creation = 0 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,644 | INFO     | ..............................
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | 
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | job summary report
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | --------------------------------------------------
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | PanDA job id: 6240404852
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | task id: 40024023
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | errors: (none)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,721 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | pilot state: finished 
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | transexitcode: 0
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | exeerrorcode: 0
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | exeerrordiag: 
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | exitcode: 0
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | exitmsg: OK
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | cpuconsumptiontime: 52421 s
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | nevents: 400
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | neventsw: 0
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | pid: 8080
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | pgrp: 8080
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | corecount: 8
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | event service: False
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | sizes: {0: 2385945, 1: 2386766, 2: 2386908, 13: 2386908, 23: 2386964, 34: 2386992, 45: 2387148, 49: 2387382, 55: 2387410, 18692: 2419346, 18699: 2428306, 18702: 24
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | --------------------------------------------------
[2024-06-22 05:53:07] 2024-06-22 09:52:47,722 | INFO     | 
[2024-06-22 05:53:07] 2024-06-22 09:52:47,723 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-22 05:53:07] 2024-06-22 09:52:47,979 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | job 6240404852 has completed (purged errors)
[2024-06-22 05:53:07] 2024-06-22 09:52:47,981 | INFO     | overall cleanup function is called
[2024-06-22 05:53:07] 2024-06-22 09:52:48,998 | INFO     | --- collectZombieJob: --- 10, [8080]
[2024-06-22 05:53:07] 2024-06-22 09:52:48,998 | INFO     | zombie collector waiting for pid 8080
[2024-06-22 05:53:07] 2024-06-22 09:52:48,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 05:53:07] 2024-06-22 09:52:50,006 | INFO     | collected zombie processes
[2024-06-22 05:53:07] 2024-06-22 09:52:50,006 | INFO     | will now attempt to kill all subprocesses of pid=8080
[2024-06-22 05:53:07] 2024-06-22 09:52:50,575 | INFO     | process IDs to be killed: [8080] (in reverse order)
[2024-06-22 05:53:07] 2024-06-22 09:52:51,214 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 05:53:07] 2024-06-22 09:52:51,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 05:53:07] 2024-06-22 09:52:51,226 | INFO     | did not find any defunct processes belonging to 8080
[2024-06-22 05:53:07] 2024-06-22 09:52:51,238 | INFO     | did not find any defunct processes belonging to 8080
[2024-06-22 05:53:07] 2024-06-22 09:52:51,238 | INFO     | ready for new job
[2024-06-22 05:53:07] 2024-06-22 09:52:51,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 05:53:07] 2024-06-22 09:52:51,241 | INFO     | *************************************
[2024-06-22 05:53:07] 2024-06-22 09:52:51,241 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 05:53:07] 2024-06-22 09:52:51,241 | INFO     | *************************************
[2024-06-22 05:53:07] 2024-06-22 09:52:51,241 | INFO     | 
[2024-06-22 05:53:07] 2024-06-22 09:52:51,247 | INFO     | architecture information:
[2024-06-22 05:53:07] 2024-06-22 09:52:51,248 | INFO     | executing command: cat /etc/os-release
[2024-06-22 05:53:07] 2024-06-22 09:52:51,377 | INFO     | cat /etc/os-release:
[2024-06-22 05:53:07] NAME="CentOS Linux"
[2024-06-22 05:53:07] VERSION="7 (Core)"
[2024-06-22 05:53:07] ID="centos"
[2024-06-22 05:53:07] ID_LIKE="rhel fedora"
[2024-06-22 05:53:07] VERSION_ID="7"
[2024-06-22 05:53:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 05:53:07] ANSI_COLOR="0;31"
[2024-06-22 05:53:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 05:53:07] HOME_URL="https://www.centos.org/"
[2024-06-22 05:53:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 05:53:07] 
[2024-06-22 05:53:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 05:53:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 05:53:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 05:53:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 05:53:07] 
[2024-06-22 05:53:07] 2024-06-22 09:52:51,377 | INFO     | *************************************
[2024-06-22 05:53:07] 2024-06-22 09:52:51,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-22 05:53:07] 2024-06-22 09:52:52,013 | INFO     | sufficient remaining disk space (99127132160 B)
[2024-06-22 05:53:07] 2024-06-22 09:52:52,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 05:53:07] 2024-06-22 09:52:52,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 05:53:07] 2024-06-22 09:52:52,013 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 05:53:07] 2024-06-22 09:52:52,014 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 05:53:07] 2024-06-22 09:52:52,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 05:53:07] 2024-06-22 09:52:52,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 05:53:07] 2024-06-22 09:52:52,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 05:53:07] 2024-06-22 09:52:52,028 | INFO     | all payload control threads have been joined
[2024-06-22 05:53:07] 2024-06-22 09:52:52,251 | INFO     | all data control threads have been joined
[2024-06-22 05:53:07] 2024-06-22 09:52:52,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:53:07] 2024-06-22 09:52:52,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:53:07] 2024-06-22 09:52:52,823 | INFO     | aborting loop
[2024-06-22 05:53:07] 2024-06-22 09:52:53,020 | INFO     | [job] retrieve thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,036 | INFO     | [payload] control thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,262 | INFO     | [data] control thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,426 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,465 | INFO     | all job control threads have been joined
[2024-06-22 05:53:07] 2024-06-22 09:52:53,486 | INFO     | [data] copytool_in thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,525 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,743 | INFO     | [job] queue monitor thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:53,828 | INFO     | [job] job monitor thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,011 | INFO     | [payload] validate_post thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,026 | INFO     | [data] copytool_out thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,302 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,332 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,379 | INFO     | [job] validate thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,471 | INFO     | [job] control thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,520 | INFO     | [payload] failed_post thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:54,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 05:53:07] 2024-06-22 09:52:58,996 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 05:53:07] 2024-06-22 09:52:59,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677617502016)>', '<ExcThread(monitor, started 140677182629632)>']
[2024-06-22 05:53:07] 2024-06-22 09:53:00,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 05:53:07] 2024-06-22 09:53:00,083 | INFO     | [monitor] control thread has ended
[2024-06-22 05:53:07] 2024-06-22 09:53:04,709 | INFO     | all workflow threads have been joined
[2024-06-22 05:53:07] 2024-06-22 09:53:04,712 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 05:53:07] 2024-06-22 09:53:04,712 | INFO     | traces error code: 0
[2024-06-22 05:53:07] 2024-06-22 09:53:04,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 05:53:07] 2024-06-22 09:53:05,079 [wrapper] ==== pilot stdout END ====
[2024-06-22 05:53:07] 2024-06-22 09:53:05,112 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 05:53:07] 2024-06-22 09:53:05,143 [wrapper] pilotpid: 77548
[2024-06-22 05:53:07] 2024-06-22 09:53:05,192 [wrapper] Pilot exit status: 0
[2024-06-22 05:53:07] 2024-06-22 09:53:05,359 [wrapper] pandaids: 6240404852
[2024-06-22 05:53:07] 2024-06-22 09:53:06,017 [wrapper] cleanup supervisor_pilot 92038 77549
[2024-06-22 05:53:07] 2024-06-22 09:53:06,059 [wrapper] Test setup, not cleaning
[2024-06-22 05:53:07] 2024-06-22 09:53:06,097 [wrapper] ==== wrapper stdout END ====
[2024-06-22 05:53:07] 2024-06-22 09:53:06,134 [wrapper] ==== wrapper stderr END ====
[2024-06-22 05:53:07] 2024-06-22 09:53:06,200 [wrapper] apfmon messages muted
[2024-06-22 05:53:07]  *** Error codes and diagnostics ***
[2024-06-22 05:53:07]     "exeErrorCode": 0,
[2024-06-22 05:53:07]     "exeErrorDiag": "",
[2024-06-22 05:53:07]     "pilotErrorCode": 0,
[2024-06-22 05:53:07]     "pilotErrorDiag": "",
[2024-06-22 05:53:07]  *** Listing of results directory ***
[2024-06-22 05:53:07] total 847220
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas    469766 Jun 21 18:00 pilot3.tar.gz
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas      5654 Jun 21 18:03 queuedata.json
[2024-06-22 05:53:07] -rwx------ 1 boincer umatlas     32308 Jun 21 18:05 runpilot2-wrapper.sh
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas       100 Jun 22 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 05:53:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun 22 00:35 run_atlas
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas       105 Jun 22 00:35 job.xml
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas 598430290 Jun 22 00:35 EVNT.40024021._000037.pool.root.1
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 00:35 start_atlas.sh
[2024-06-22 05:53:07] drwxrwx--x 2 boincer umatlas      4096 Jun 22 00:35 shared
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas    482494 Jun 22 00:35 input.tar.gz
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas         0 Jun 22 00:35 boinc_lockfile
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas      2517 Jun 22 00:36 pandaJob.out
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas       467 Jun 22 00:36 setup.sh.local
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas   1025953 Jun 22 00:38 agis_schedconf.cvmfs.json
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas   1321363 Jun 22 00:38 cric_ddmendpoints.json
[2024-06-22 05:53:07] drwx------ 4 boincer umatlas      4096 Jun 22 00:38 pilot3
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas      6387 Jun 22 05:46 init_data.xml
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas 261239073 Jun 22 05:50 HITS.40024023._001504.pool.root.1
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas       532 Jun 22 05:51 boinc_task_state.xml
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas      1093 Jun 22 05:51 memory_monitor_summary.json
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas         0 Jun 22 05:51 agis_ddmendpoints.agis.ALL.json
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas    461178 Jun 22 05:51 log.40024023._001504.job.log.tgz.1
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas        95 Jun 22 05:52 pilot_heartbeat.json
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas      7778 Jun 22 05:52 heartbeat.json
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas        28 Jun 22 05:52 wrapper_checkpoint.txt
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 05:52 boinc_mmap_file
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas      4334 Jun 22 05:53 pilotlog.txt
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas   1709692 Jun 22 05:53 log.40024023._001504.job.log.1
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas       357 Jun 22 05:53 output.list
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas       620 Jun 22 05:53 runtime_log
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas   2191360 Jun 22 05:53 result.tar.gz
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas     11400 Jun 22 05:53 runtime_log.err
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas       651 Jun 22 05:53 QFsLDmyY1e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmeAnKDm6frXWm.diag
[2024-06-22 05:53:07] -rw-r--r-- 1 boincer umatlas     21726 Jun 22 05:53 stderr.txt
[2024-06-22 05:53:07] HITS file was successfully produced:
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas 261239073 Jun 22 05:50 shared/HITS.pool.root.1
[2024-06-22 05:53:07]  *** Contents of shared directory: ***
[2024-06-22 05:53:07] total 842168
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas 598430290 Jun 22 00:35 ATLAS.root_0
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 22 00:35 start_atlas.sh
[2024-06-22 05:53:07] -rw-r--r-- 2 boincer umatlas    482494 Jun 22 00:35 input.tar.gz
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas 261239073 Jun 22 05:50 HITS.pool.root.1
[2024-06-22 05:53:07] -rw------- 1 boincer umatlas   2191360 Jun 22 05:53 result.tar.gz
05:53:08 (60689): run_atlas exited; CPU time 50970.597227
05:53:08 (60689): called boinc_finish(0)

</stderr_txt>
]]>

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