Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:02:57 (944925): wrapper (7.7.26015): starting
18:02:57 (944925): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 18:02:57] Arguments: --nthreads 4
[2024-06-22 18:02:57] Threads: 4
[2024-06-22 18:02:57] Checking for CVMFS
[2024-06-22 18:02:57] No cvmfs_config command found, will try listing directly
[2024-06-22 18:02:57] CVMFS is ok
[2024-06-22 18:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 18:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 18:02:57] Further information can be found at the LHC@home message board.
[2024-06-22 18:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 18:02:57] Checking for apptainer binary...
[2024-06-22 18:02:57] which: no apptainer in ((null))
[2024-06-22 18:02:57] apptainer is not installed, using version from CVMFS
[2024-06-22 18:02:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 18:02:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 18:02:57] apptainer works
[2024-06-22 18:02:57] Set ATHENA_PROC_NUMBER=4
[2024-06-22 18:02:57] Set ATHENA_CORE_NUMBER=4
[2024-06-22 18:02:57] Starting ATLAS job with PandaID=6240384749
[2024-06-22 18:02:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 18:06:04]  *** The last 200 lines of the pilot log: ***
[2024-06-22 18:06:04] 2024-06-22 16:05:49,350 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6240384749/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard info from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | WARNING  | GPU info not found in prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | found no stored workdir sizes
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | WARNING  | wrong length of table data, x=[1719072213.0], y=[33703.0] (must be same and length>=4)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . Timing measurements:
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . get job = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . initial setup = 1 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . payload setup = 5 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-in = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . payload execution = 16 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-out = 6 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . log creation = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6240384749/pilotlog.txt
[2024-06-22 18:06:04] 2024-06-22 16:05:49,371 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 18:06:04] - Log from pilotlog.txt -
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard info from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | WARNING  | GPU info not found in prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | found no stored workdir sizes
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | WARNING  | wrong length of table data, x=[1719072213.0], y=[33703.0] (must be same and length>=4)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . Timing measurements:
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . get job = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . initial setup = 1 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . payload setup = 5 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-in = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . payload execution = 16 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-out = 6 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . log creation = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6240384749/pilotlog.txt
[2024-06-22 18:06:04] 2024-06-22 16:05:49,372 | WARNING  | 
[2024-06-22 18:06:04] [begin log extracts]
[2024-06-22 18:06:04] - Log from pilotlog.txt -
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard info from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,351 | WARNING  | GPU info not found in prmon json
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | WARNING  | found no stored workdir sizes
[2024-06-22 18:06:04] 2024-06-22 16:05:49,352 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | WARNING  | wrong length of table data, x=[1719072213.0], y=[33703.0] (must be same and length>=4)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . Timing measurements:
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . get job = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . initial setup = 1 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,353 | INFO     | . payload setup = 5 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-in = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . payload execution = 16 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . stage-out = 6 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | . log creation = 0 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | ..............................
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 18:06:04] 2024-06-22 16:05:49,354 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6240384749/pilotlog.txt
[2024-06-22 18:06:04] [end log extracts]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,372 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,372 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 18:03:40,828 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 18:06:04] 2024-06-22 16:05:49,874 | INFO     | 
[2024-06-22 18:06:04] 2024-06-22 16:05:49,874 | INFO     | job summary report
[2024-06-22 18:06:04] 2024-06-22 16:05:49,874 | INFO     | --------------------------------------------------
[2024-06-22 18:06:04] 2024-06-22 16:05:49,874 | INFO     | PanDA job id: 6240384749
[2024-06-22 18:06:04] 2024-06-22 16:05:49,874 | INFO     | task id: 38921013
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 18:03:40,828 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | pilot state: failed 
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | transexitcode: 65
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | exeerrorcode: 65
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | exitcode: 65
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | cpuconsumptiontime: 22 s
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | nevents: 0
[2024-06-22 18:06:04] 2024-06-22 16:05:49,875 | INFO     | neventsw: 0
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | pid: 970634
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | pgrp: 970634
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | corecount: 4
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | event service: False
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | sizes: {0: 2387040, 1: 2387068, 5: 2387274, 11: 2387330, 26: 2414747, 27: 2414747, 32: 2414903, 33: 2414959, 147: 2415073}
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | --------------------------------------------------
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | 
[2024-06-22 18:06:04] 2024-06-22 16:05:49,876 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-22 18:06:04] 2024-06-22 16:05:49,897 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,897 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,898 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | job 6240384749 has completed (purged errors)
[2024-06-22 18:06:04] 2024-06-22 16:05:49,899 | INFO     | overall cleanup function is called
[2024-06-22 18:06:04] 2024-06-22 16:05:50,906 | INFO     | --- collectZombieJob: --- 10, [970634]
[2024-06-22 18:06:04] 2024-06-22 16:05:50,906 | INFO     | zombie collector waiting for pid 970634
[2024-06-22 18:06:04] 2024-06-22 16:05:50,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 18:06:04] 2024-06-22 16:05:51,911 | INFO     | collected zombie processes
[2024-06-22 18:06:04] 2024-06-22 16:05:51,912 | INFO     | will now attempt to kill all subprocesses of pid=970634
[2024-06-22 18:06:04] 2024-06-22 16:05:52,048 | INFO     | process IDs to be killed: [970634] (in reverse order)
[2024-06-22 18:06:04] 2024-06-22 16:05:52,164 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 18:06:04] 2024-06-22 16:05:52,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 18:06:04] 2024-06-22 16:05:52,179 | INFO     | did not find any defunct processes belonging to 970634
[2024-06-22 18:06:04] 2024-06-22 16:05:52,190 | INFO     | did not find any defunct processes belonging to 970634
[2024-06-22 18:06:04] 2024-06-22 16:05:52,190 | INFO     | ready for new job
[2024-06-22 18:06:04] 2024-06-22 16:05:52,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 18:06:04] 2024-06-22 16:05:52,191 | INFO     | *************************************
[2024-06-22 18:06:04] 2024-06-22 16:05:52,192 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 18:06:04] 2024-06-22 16:05:52,192 | INFO     | *************************************
[2024-06-22 18:06:04] 2024-06-22 16:05:52,192 | INFO     | 
[2024-06-22 18:06:04] 2024-06-22 16:05:52,200 | INFO     | architecture information:
[2024-06-22 18:06:04] 2024-06-22 16:05:52,201 | INFO     | executing command: cat /etc/os-release
[2024-06-22 18:06:04] 2024-06-22 16:05:52,221 | INFO     | cat /etc/os-release:
[2024-06-22 18:06:04] NAME="CentOS Linux"
[2024-06-22 18:06:04] VERSION="7 (Core)"
[2024-06-22 18:06:04] ID="centos"
[2024-06-22 18:06:04] ID_LIKE="rhel fedora"
[2024-06-22 18:06:04] VERSION_ID="7"
[2024-06-22 18:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 18:06:04] ANSI_COLOR="0;31"
[2024-06-22 18:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 18:06:04] HOME_URL="https://www.centos.org/"
[2024-06-22 18:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 18:06:04] 
[2024-06-22 18:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 18:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 18:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 18:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 18:06:04] 
[2024-06-22 18:06:04] 2024-06-22 16:05:52,221 | INFO     | *************************************
[2024-06-22 18:06:04] 2024-06-22 16:05:52,723 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-22 18:06:04] 2024-06-22 16:05:52,744 | INFO     | sufficient remaining disk space (3154843271168 B)
[2024-06-22 18:06:04] 2024-06-22 16:05:52,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 18:06:04] 2024-06-22 16:05:52,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 18:06:04] 2024-06-22 16:05:52,745 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 18:06:04] 2024-06-22 16:05:52,746 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 18:06:04] 2024-06-22 16:05:52,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 18:06:04] 2024-06-22 16:05:52,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 18:06:04] 2024-06-22 16:05:52,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 18:06:04] 2024-06-22 16:05:53,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 18:06:04] 2024-06-22 16:05:53,351 | INFO     | aborting loop
[2024-06-22 18:06:04] 2024-06-22 16:05:53,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 18:06:04] 2024-06-22 16:05:53,656 | INFO     | all data control threads have been joined
[2024-06-22 18:06:04] 2024-06-22 16:05:53,750 | INFO     | [job] retrieve thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:53,905 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:53,986 | INFO     | [job] validate thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,069 | INFO     | all payload control threads have been joined
[2024-06-22 18:06:04] 2024-06-22 16:05:54,205 | INFO     | all job control threads have been joined
[2024-06-22 18:06:04] 2024-06-22 16:05:54,244 | INFO     | [data] copytool_in thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,245 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,319 | INFO     | [payload] failed_post thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,356 | INFO     | [job] job monitor thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,409 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 18:06:04] 2024-06-22 16:05:54,591 | INFO     | [payload] validate_post thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,661 | INFO     | [data] control thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:54,979 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:55,075 | INFO     | [payload] control thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:55,210 | INFO     | [job] control thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:55,470 | INFO     | [job] queue monitor thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:55,478 | INFO     | [data] copytool_out thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:56,974 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 18:06:04] 2024-06-22 16:05:58,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47724747039808)>', '<ExcThread(monitor, started 47725148124928)>']
[2024-06-22 18:06:04] 2024-06-22 16:05:59,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 18:06:04] 2024-06-22 16:05:59,781 | INFO     | [monitor] control thread has ended
[2024-06-22 18:06:04] 2024-06-22 16:06:03,812 | INFO     | all workflow threads have been joined
[2024-06-22 18:06:04] 2024-06-22 16:06:03,813 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 18:06:04] 2024-06-22 16:06:03,813 | INFO     | traces error code: 0
[2024-06-22 18:06:04] 2024-06-22 16:06:03,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 18:06:04] 2024-06-22 16:06:03,937 [wrapper] ==== pilot stdout END ====
[2024-06-22 18:06:04] 2024-06-22 16:06:03,939 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 18:06:04] 2024-06-22 16:06:03,942 [wrapper] pilotpid: 957197
[2024-06-22 18:06:04] 2024-06-22 16:06:03,944 [wrapper] Pilot exit status: 0
[2024-06-22 18:06:04] 2024-06-22 16:06:03,952 [wrapper] pandaids: 6240384749
[2024-06-22 18:06:04] 2024-06-22 16:06:04,059 [wrapper] cleanup supervisor_pilot  957214 957199
[2024-06-22 18:06:04] 2024-06-22 16:06:04,062 [wrapper] Test setup, not cleaning
[2024-06-22 18:06:04] 2024-06-22 16:06:04,064 [wrapper] ==== wrapper stdout END ====
[2024-06-22 18:06:04] 2024-06-22 16:06:04,066 [wrapper] ==== wrapper stderr END ====
[2024-06-22 18:06:04] 2024-06-22 16:06:04,071 [wrapper] apfmon messages muted
[2024-06-22 18:06:04]  *** Error codes and diagnostics ***
[2024-06-22 18:06:04]     "exeErrorCode": 65,
[2024-06-22 18:06:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 18:06:04]     "pilotErrorCode": 1305,
[2024-06-22 18:06:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 18:03:40,828 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 18:06:04]  *** Listing of results directory ***
[2024-06-22 18:06:04] total 531060
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc    469766 Jun 21 23:44 pilot3.tar.gz
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc      5654 Jun 21 23:53 queuedata.json
[2024-06-22 18:06:04] -rwx------ 1 boinc boinc     32308 Jun 21 23:54 runpilot2-wrapper.sh
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc       100 Jun 22 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 18:06:04] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 17:52 run_atlas
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc       105 Jun 22 17:52 job.xml
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc      6642 Jun 22 18:02 init_data.xml
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc 540078371 Jun 22 18:02 EVNT.38776210._000375.pool.root.1
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:02 start_atlas.sh
[2024-06-22 18:06:04] drwxrwx--x 2 boinc boinc      4096 Jun 22 18:02 shared
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc    482529 Jun 22 18:02 input.tar.gz
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc         0 Jun 22 18:02 boinc_lockfile
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc      2645 Jun 22 18:02 pandaJob.out
[2024-06-22 18:06:04] -rw------- 1 boinc boinc       424 Jun 22 18:02 setup.sh.local
[2024-06-22 18:06:04] -rw------- 1 boinc boinc   1025930 Jun 22 18:03 agis_schedconf.cvmfs.json
[2024-06-22 18:06:04] -rw------- 1 boinc boinc         0 Jun 22 18:03 agis_ddmendpoints.agis.ALL.json
[2024-06-22 18:06:04] -rw------- 1 boinc boinc   1321363 Jun 22 18:03 cric_ddmendpoints.json
[2024-06-22 18:06:04] drwx------ 4 boinc boinc      4096 Jun 22 18:03 pilot3
[2024-06-22 18:06:04] -rw------- 1 boinc boinc       976 Jun 22 18:03 memory_monitor_summary.json
[2024-06-22 18:06:04] -rw------- 1 boinc boinc     20356 Jun 22 18:03 log.38921013._052443.job.log.tgz.1
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc       522 Jun 22 18:03 boinc_task_state.xml
[2024-06-22 18:06:04] -rw------- 1 boinc boinc        95 Jun 22 18:05 pilot_heartbeat.json
[2024-06-22 18:06:04] -rw------- 1 boinc boinc      8346 Jun 22 18:05 heartbeat.json
[2024-06-22 18:06:04] -rw------- 1 boinc boinc      4345 Jun 22 18:06 pilotlog.txt
[2024-06-22 18:06:04] -rw------- 1 boinc boinc     75639 Jun 22 18:06 log.38921013._052443.job.log.1
[2024-06-22 18:06:04] -rw------- 1 boinc boinc       188 Jun 22 18:06 output.list
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc       620 Jun 22 18:06 runtime_log
[2024-06-22 18:06:04] -rw------- 1 boinc boinc    112640 Jun 22 18:06 result.tar.gz
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc     11256 Jun 22 18:06 runtime_log.err
[2024-06-22 18:06:04] -rw------- 1 boinc boinc       635 Jun 22 18:06 5GBLDmpO1e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmOAnKDmF9OYFm.diag
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc      8192 Jun 22 18:06 boinc_mmap_file
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc        22 Jun 22 18:06 wrapper_checkpoint.txt
[2024-06-22 18:06:04] -rw-r--r-- 1 boinc boinc     21410 Jun 22 18:06 stderr.txt
[2024-06-22 18:06:04] No HITS result produced
[2024-06-22 18:06:04]  *** Contents of shared directory: ***
[2024-06-22 18:06:04] total 528032
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc 540078371 Jun 22 18:02 ATLAS.root_0
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:02 start_atlas.sh
[2024-06-22 18:06:04] -rw-r--r-- 2 boinc boinc    482529 Jun 22 18:02 input.tar.gz
[2024-06-22 18:06:04] -rw------- 1 boinc boinc    112640 Jun 22 18:06 result.tar.gz
18:06:06 (944925): run_atlas exited; CPU time 20.423426
18:06:06 (944925): called boinc_finish(0)

</stderr_txt>
]]>

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