Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:44:12 (1271666): wrapper (7.7.26015): starting
14:44:12 (1271666): wrapper: running run_atlas (--nthreads 2)
[2024-06-22 14:44:12] Arguments: --nthreads 2
[2024-06-22 14:44:12] Threads: 2
[2024-06-22 14:44:12] Checking for CVMFS
[2024-06-22 14:44:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 14:44:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 14:44:12] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 14:44:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 14:44:12] 2.11.3.0 489795 1064 50440 134180 2 56 2415309 6144001 2766 130560 0 2787984 99.997 186715 2434 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.188.245:3126 1
[2024-06-22 14:44:12] CVMFS is ok
[2024-06-22 14:44:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 14:44:12] Checking for apptainer binary...
[2024-06-22 14:44:12] apptainer is not installed, using version from CVMFS
[2024-06-22 14:44:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 14:44:13] um780
[2024-06-22 14:44:13] apptainer works
[2024-06-22 14:44:13] Set ATHENA_PROC_NUMBER=2
[2024-06-22 14:44:13] Set ATHENA_CORE_NUMBER=2
[2024-06-22 14:44:13] Starting ATLAS job with PandaID=6240338870
[2024-06-22 14:44:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 19:14:52]  *** The last 200 lines of the pilot log: ***
[2024-06-22 19:14:52] 2024-06-23 02:14:38,288 | INFO     | intersect: -13015713981.676748
[2024-06-22 19:14:52] 2024-06-23 02:14:38,288 | INFO     | chi2: 1.2604223627269697
[2024-06-22 19:14:52] 2024-06-23 02:14:38,288 | INFO     | current chi2=1.2604223627269697 (change=61.71877971405677 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,288 | INFO     | model: linear, x: [1719093307.0, 1719093368.0, 1719093429.0, 1719093490.0, 1719093551.0, 1719093612.0, 1719093673.0, 1719093734.0, 1719093795.0, 1719093856.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,288 | INFO     | sum of square deviations: 5141528960.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,289 | INFO     | sum of deviations: 6409850598.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | mean x: 1719101054.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | mean y: 2298678.498039216
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | -- intersect: -2140873324.3694367
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | intersect: -2140873324.3694367
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | chi2: 0.49681530535810126
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | current chi2=0.49681530535810126 (change=60.583426631433035 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | model: linear, x: [1719093612.0, 1719093673.0, 1719093734.0, 1719093795.0, 1719093856.0, 1719093917.0, 1719093978.0, 1719094039.0, 1719094100.0, 1719094161.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,290 | INFO     | sum of square deviations: 4844974562.5
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | sum of deviations: -4542935350.000003
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | mean x: 1719101206.5
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | mean y: 2304203.288
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | -- intersect: 1614235399.312005
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | intersect: 1614235399.312005
[2024-06-22 19:14:52] 2024-06-23 02:14:38,291 | INFO     | chi2: 0.1673940073833943
[2024-06-22 19:14:52] 2024-06-23 02:14:38,292 | INFO     | current chi2=0.1673940073833943 (change=66.30659209205768 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,292 | INFO     | model: linear, x: [1719093917.0, 1719093978.0, 1719094039.0, 1719094100.0, 1719094161.0, 1719094222.0, 1719094283.0, 1719094344.0, 1719094405.0, 1719094466.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,292 | INFO     | sum of square deviations: 4560048290.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | sum of deviations: 8376306622.000003
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | mean x: 1719101359.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | mean y: 2297286.1836734693
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | -- intersect: -3155502627.659104
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | intersect: -3155502627.659104
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | chi2: 0.056833185317662446
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | current chi2=0.056833185317662446 (change=66.04825572549117 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | model: linear, x: [1719094222.0, 1719094283.0, 1719094344.0, 1719094405.0, 1719094466.0, 1719094527.0, 1719094588.0, 1719094649.0, 1719094710.0, 1719094771.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,293 | INFO     | sum of square deviations: 4286517580.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | sum of deviations: 12752508475.999998
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | mean x: 1719101511.5
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | mean y: 2294887.6666666665
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | -- intersect: -5112079703.678916
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | intersect: -5112079703.678916
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | chi2: 0.002227160580657529
[2024-06-22 19:14:52] 2024-06-23 02:14:38,294 | INFO     | current chi2=0.002227160580657529 (change=96.08123217410906 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,295 | INFO     | model: linear, x: [1719094527.0, 1719094588.0, 1719094649.0, 1719094710.0, 1719094771.0, 1719094832.0, 1719094893.0, 1719094954.0, 1719095015.0, 1719095076.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,295 | INFO     | sum of square deviations: 4024149870.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | sum of deviations: 11210412616.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | mean x: 1719101664.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | mean y: 2295782.45106383
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | -- intersect: -4786750253.324983
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | intersect: -4786750253.324983
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | chi2: 0.001734136830373185
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | current chi2=0.001734136830373185 (change=22.136874842620813 %)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | left removable region: 60
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | model: linear, x: [1719096357.0, 1719096418.0, 1719096479.0, 1719096540.0, 1719096601.0, 1719096662.0, 1719096723.0, 1719096784.0, 1719096845.0, 1719096906.0, 1719
[2024-06-22 19:14:52] 2024-06-23 02:14:38,296 | INFO     | sum of square deviations: 2443580700.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | sum of deviations: 4698791875.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | mean x: 1719102396.0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | mean y: 2299609.824120603
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | -- intersect: -3303383877.779883
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | intersect: -3303383877.779883
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | chi2: 0.0005090047581642899
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | -- intersect: -3303383877.779883
[2024-06-22 19:14:52] 2024-06-23 02:14:38,297 | INFO     | current memory leak: 1.92 B/s (using 199 data points, chi2=0.00)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | ..............................
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . Timing measurements:
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . get job = 0 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . initial setup = 2 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . payload setup = 8 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . stage-in = 0 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . payload execution = 16169 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . stage-out = 1 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | . log creation = 0 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,298 | INFO     | ..............................
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | 
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | job summary report
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | --------------------------------------------------
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | PanDA job id: 6240338870
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | task id: 40024058
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | errors: (none)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | pilot state: finished 
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | transexitcode: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | exeerrorcode: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | exeerrordiag: 
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | exitcode: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | exitmsg: OK
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | cpuconsumptiontime: 30874 s
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | nevents: 400
[2024-06-22 19:14:52] 2024-06-23 02:14:38,359 | INFO     | neventsw: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | pid: 1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | pgrp: 1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | corecount: 2
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | event service: False
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | sizes: {0: 2386997, 5: 2387203, 11: 2387259, 16181: 2418836, 16185: 2427810, 16188: 2427866, 16194: 2428164}
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | --------------------------------------------------
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | 
[2024-06-22 19:14:52] 2024-06-23 02:14:38,360 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-06-22 19:14:52] 2024-06-23 02:14:38,415 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,417 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 19:14:52] 2024-06-23 02:14:38,417 | INFO     | job 6240338870 has completed (purged errors)
[2024-06-22 19:14:52] 2024-06-23 02:14:38,417 | INFO     | overall cleanup function is called
[2024-06-22 19:14:52] 2024-06-23 02:14:39,423 | INFO     | --- collectZombieJob: --- 10, [1282654]
[2024-06-22 19:14:52] 2024-06-23 02:14:39,423 | INFO     | zombie collector waiting for pid 1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:39,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 19:14:52] 2024-06-23 02:14:40,428 | INFO     | collected zombie processes
[2024-06-22 19:14:52] 2024-06-23 02:14:40,428 | INFO     | will now attempt to kill all subprocesses of pid=1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:40,573 | INFO     | process IDs to be killed: [1282654] (in reverse order)
[2024-06-22 19:14:52] 2024-06-23 02:14:40,652 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 19:14:52] 2024-06-23 02:14:40,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 19:14:52] 2024-06-23 02:14:40,656 | INFO     | did not find any defunct processes belonging to 1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:40,660 | INFO     | did not find any defunct processes belonging to 1282654
[2024-06-22 19:14:52] 2024-06-23 02:14:40,660 | INFO     | ready for new job
[2024-06-22 19:14:52] 2024-06-23 02:14:40,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 19:14:52] 2024-06-23 02:14:40,662 | INFO     | *************************************
[2024-06-22 19:14:52] 2024-06-23 02:14:40,662 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 19:14:52] 2024-06-23 02:14:40,662 | INFO     | *************************************
[2024-06-22 19:14:52] 2024-06-23 02:14:40,662 | INFO     | 
[2024-06-22 19:14:52] 2024-06-23 02:14:40,663 | INFO     | architecture information:
[2024-06-22 19:14:52] 2024-06-23 02:14:40,663 | INFO     | executing command: cat /etc/os-release
[2024-06-22 19:14:52] 2024-06-23 02:14:40,690 | INFO     | cat /etc/os-release:
[2024-06-22 19:14:52] NAME="CentOS Linux"
[2024-06-22 19:14:52] VERSION="7 (Core)"
[2024-06-22 19:14:52] ID="centos"
[2024-06-22 19:14:52] ID_LIKE="rhel fedora"
[2024-06-22 19:14:52] VERSION_ID="7"
[2024-06-22 19:14:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 19:14:52] ANSI_COLOR="0;31"
[2024-06-22 19:14:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 19:14:52] HOME_URL="https://www.centos.org/"
[2024-06-22 19:14:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 19:14:52] 
[2024-06-22 19:14:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 19:14:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 19:14:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 19:14:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 19:14:52] 
[2024-06-22 19:14:52] 2024-06-23 02:14:40,690 | INFO     | *************************************
[2024-06-22 19:14:52] 2024-06-23 02:14:41,193 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-06-22 19:14:52] 2024-06-23 02:14:41,222 | INFO     | sufficient remaining disk space (150813540352 B)
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 19:14:52] 2024-06-23 02:14:41,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 19:14:52] 2024-06-23 02:14:41,513 | INFO     | all data control threads have been joined
[2024-06-22 19:14:52] 2024-06-23 02:14:41,613 | INFO     | all job control threads have been joined
[2024-06-22 19:14:52] 2024-06-23 02:14:41,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 19:14:52] 2024-06-23 02:14:41,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:14:52] 2024-06-23 02:14:41,864 | INFO     | aborting loop
[2024-06-22 19:14:52] 2024-06-23 02:14:42,227 | INFO     | [job] retrieve thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,453 | INFO     | [payload] validate_post thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,518 | INFO     | [data] control thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,531 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 19:14:52] 2024-06-23 02:14:42,617 | INFO     | [job] control thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,625 | INFO     | all payload control threads have been joined
[2024-06-22 19:14:52] 2024-06-23 02:14:42,732 | INFO     | [job] validate thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:42,869 | INFO     | [job] job monitor thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,005 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,074 | INFO     | [data] copytool_in thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,090 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:14:52] 2024-06-23 02:14:43,440 | INFO     | [payload] failed_post thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,498 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,633 | INFO     | [payload] control thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:43,802 | INFO     | [data] copytool_out thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:44,375 | INFO     | [job] queue monitor thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:46,561 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 19:14:52] 2024-06-23 02:14:46,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135192912037696)>', '<ExcThread(monitor, started 135192415045376)>']
[2024-06-22 19:14:52] 2024-06-23 02:14:47,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 19:14:52] 2024-06-23 02:14:47,255 | INFO     | [monitor] control thread has ended
[2024-06-22 19:14:52] 2024-06-23 02:14:51,720 | INFO     | all workflow threads have been joined
[2024-06-22 19:14:52] 2024-06-23 02:14:51,720 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 19:14:52] 2024-06-23 02:14:51,721 | INFO     | traces error code: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:51,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 19:14:52] 2024-06-23 02:14:51,835 [wrapper] ==== pilot stdout END ====
[2024-06-22 19:14:52] 2024-06-23 02:14:51,841 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 19:14:52] 2024-06-23 02:14:51,848 [wrapper] pilotpid: 1275998
[2024-06-22 19:14:52] 2024-06-23 02:14:51,850 [wrapper] Pilot exit status: 0
[2024-06-22 19:14:52] 2024-06-23 02:14:51,861 [wrapper] pandaids: 6240338870
[2024-06-22 19:14:52] 2024-06-23 02:14:51,899 [wrapper] cleanup supervisor_pilot 1459390 1275999
[2024-06-22 19:14:52] 2024-06-23 02:14:51,902 [wrapper] Test setup, not cleaning
[2024-06-22 19:14:52] 2024-06-23 02:14:51,908 [wrapper] ==== wrapper stdout END ====
[2024-06-22 19:14:52] 2024-06-23 02:14:51,912 [wrapper] ==== wrapper stderr END ====
[2024-06-22 19:14:52] 2024-06-23 02:14:51,921 [wrapper] apfmon messages muted
[2024-06-22 19:14:52]  *** Error codes and diagnostics ***
[2024-06-22 19:14:52]     "exeErrorCode": 0,
[2024-06-22 19:14:52]     "exeErrorDiag": "",
[2024-06-22 19:14:52]     "pilotErrorCode": 0,
[2024-06-22 19:14:52]     "pilotErrorDiag": "",
[2024-06-22 19:14:52]  *** Listing of results directory ***
[2024-06-22 19:14:52] total 874540
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc    469766 Jun 21 14:32 pilot3.tar.gz
[2024-06-22 19:14:52] -rwx------ 1 boinc boinc     32308 Jun 21 14:34 runpilot2-wrapper.sh
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc      5654 Jun 21 14:34 queuedata.json
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc       100 Jun 22 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 19:14:52] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 14:44 run_atlas
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc       105 Jun 22 14:44 job.xml
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc 615858838 Jun 22 14:44 EVNT.40024055._000038.pool.root.1
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc     17537 Jun 22 14:44 start_atlas.sh
[2024-06-22 19:14:52] drwxrwx--x 2 boinc boinc      4096 Jun 22 14:44 shared
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc    482509 Jun 22 14:44 input.tar.gz
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc      9963 Jun 22 14:44 init_data.xml
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc         0 Jun 22 14:44 boinc_lockfile
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc      2553 Jun 22 14:44 pandaJob.out
[2024-06-22 19:14:52] -rw------- 1 boinc boinc       424 Jun 22 14:44 setup.sh.local
[2024-06-22 19:14:52] -rw------- 1 boinc boinc   1025761 Jun 22 14:44 agis_schedconf.cvmfs.json
[2024-06-22 19:14:52] -rw------- 1 boinc boinc   1321363 Jun 22 14:44 cric_ddmendpoints.json
[2024-06-22 19:14:52] drwx------ 4 boinc boinc      4096 Jun 22 14:44 pilot3
[2024-06-22 19:14:52] -rw------- 1 boinc boinc 272065982 Jun 22 19:13 HITS.40024058._001618.pool.root.1
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc       531 Jun 22 19:14 boinc_task_state.xml
[2024-06-22 19:14:52] -rw------- 1 boinc boinc        95 Jun 22 19:14 pilot_heartbeat.json
[2024-06-22 19:14:52] -rw------- 1 boinc boinc      1026 Jun 22 19:14 memory_monitor_summary.json
[2024-06-22 19:14:52] -rw------- 1 boinc boinc         0 Jun 22 19:14 agis_ddmendpoints.agis.ALL.json
[2024-06-22 19:14:52] -rw------- 1 boinc boinc    323824 Jun 22 19:14 log.40024058._001618.job.log.tgz.1
[2024-06-22 19:14:52] -rw------- 1 boinc boinc      7675 Jun 22 19:14 heartbeat.json
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc      8192 Jun 22 19:14 boinc_mmap_file
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc        28 Jun 22 19:14 wrapper_checkpoint.txt
[2024-06-22 19:14:52] -rw------- 1 boinc boinc      4342 Jun 22 19:14 pilotlog.txt
[2024-06-22 19:14:52] -rw------- 1 boinc boinc   1706635 Jun 22 19:14 log.40024058._001618.job.log.1
[2024-06-22 19:14:52] -rw------- 1 boinc boinc       357 Jun 22 19:14 output.list
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc       620 Jun 22 19:14 runtime_log
[2024-06-22 19:14:52] -rw------- 1 boinc boinc   2048000 Jun 22 19:14 result.tar.gz
[2024-06-22 19:14:52] -rw------- 1 boinc boinc       641 Jun 22 19:14 z80KDm340e5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmZ9mKDmkJaIwm.diag
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc     11100 Jun 22 19:14 runtime_log.err
[2024-06-22 19:14:52] -rw-r--r-- 1 boinc boinc     21313 Jun 22 19:14 stderr.txt
[2024-06-22 19:14:52] HITS file was successfully produced:
[2024-06-22 19:14:52] -rw------- 1 boinc boinc 272065982 Jun 22 19:13 shared/HITS.pool.root.1
[2024-06-22 19:14:52]  *** Contents of shared directory: ***
[2024-06-22 19:14:52] total 869620
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc 615858838 Jun 22 14:44 ATLAS.root_0
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc     17537 Jun 22 14:44 start_atlas.sh
[2024-06-22 19:14:52] -rw-r--r-- 2 boinc boinc    482509 Jun 22 14:44 input.tar.gz
[2024-06-22 19:14:52] -rw------- 1 boinc boinc 272065982 Jun 22 19:13 HITS.pool.root.1
[2024-06-22 19:14:52] -rw------- 1 boinc boinc   2048000 Jun 22 19:14 result.tar.gz
19:14:53 (1271666): run_atlas exited; CPU time 30740.725169
19:14:53 (1271666): called boinc_finish(0)

</stderr_txt>
]]>

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